KEGG   Gymnogyps californianus (California condor): 127017937
Entry
127017937         CDS       T08687                                 
Name
(RefSeq) DNA excision repair protein ERCC-6
  KO
K10841  DNA excision repair protein ERCC-6
Organism
gcl  Gymnogyps californianus (California condor)
Pathway
gcl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gcl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    127017937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gcl03036]
    127017937
   03400 DNA repair and recombination proteins [BR:gcl03400]
    127017937
Chromosome and associated proteins [BR:gcl03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    127017937
DNA repair and recombination proteins [BR:gcl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      127017937
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C DEAD TFIIF_beta
Other DBs
NCBI-GeneID: 127017937
NCBI-ProteinID: XP_050755222
LinkDB
Position
6:20678834..20726810
AA seq 1523 aa
MRNFVCVNVLMMMWFFFVAFEQRMPTDNSHLPDGIQEQDPVTTSSDNCLHNTEELGIEQE
NGIYNSDLGNSIRVPSSASQSSTSMAVPLEVPRRGQPLLQINRQQIQSISYSAQAAELKG
LGVDVYDQDVLEQGVLQQVDNAINEANKATKIADAEKEYQSVLDDLRSCTTSLKQISKII
EQLSPQAADNKDINRKLDSVKRQKYNKEQQLKKIKAKQKRLQAILGGTEILDKVNEIELE
EDEEPGPSCLGSMLMPVQETEWEELIRTGQMTPFGTKIPQKPERKTRRLMLNEASDFEKY
LADQAKLSSERKKLSLHKGAKKKAQAKNVQCVAPASTTKEKRGKALSKTDKRLKKHMRKL
QKHALQIQSKAEIPKEKKYLEAKKFRREQEDDSGESEYVPDEELFDPEAAEEEEEQASSH
VENDSDDELRNLSRKKKYLVKRDFKEAEDDADFFPSSEEEEHTLGKRKVKRWRDDGDEDY
YKQRLRRWQKERLKDKEHQTAEELSEESDADFEEGFKVPGFLFRKLFKYQQTGVRWLWEL
HCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQW
VKEFHTWWPPFRVAILHETGSYTNKKVKLIHEIASCHGILITSYSYIRMMQDNIHSYDWH
YVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLP
VFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNE
QVLFCRLTDEQRQVYQNFINSKEVYQILNGDMQIFSGLVALRKICNHPDLFSGGPRILKC
VPDAEVEEADQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNY
SYLRMDGTTAIASRQPLITRYNEDKSVFVFLLTTRVGGIGVNLTGADRVIIYDPDWNPST
DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSND
LYELFTLSSPDVSQGTETSAIFAGTGSDVQVPKHQLKRKLEKPPDSDTSKGDLHLTESSS
PKYSKSSNSYSTTHMTNDSSKAIETSEETQGNLEAFDQNSSAKDNAQAATNINSLNKSKE
ESLERAEKSMSQSLPGDAGSSENATCLNTTVADEVHGAANANVKGDFSLPCGAAGSWEKH
VAKTEDAQLDNNHYKCTSKTKHRVDALSHESHKDKSKKKHHKDAKFEGERIPHLVKQKQY
RRENSEEKEEDSKKNDDYVLEKLFKKSGVHSVMKHDAIMEASSADHVLVEAEASRVAQDA
LRALKVSRQRCLGAASGVPTWTGMSGLSGAPSGIKSRFGQKRNPMLLSSHSTYASPAKKC
KDADPIKKENVKKCSSNGHFDGKSGESSSSALDSSSLLAKMRARNHLLLPQQTGNEGDEN
HQRAPAPASGSTEYDELLVDVRNFIAFQARVDGEASTRELLQEFESKLPAAQSCIFRELL
RNLCTFHRSPNGEGVWRLKPEFR
NT seq 4572 nt   +upstreamnt  +downstreamnt
atgaggaacttcgtgtgtgtgaatgttcttatgatgatgtggttcttctttgttgccttt
gagcagaggatgccaacagacaacagccacctgccagacggtatccaagaacaagaccct
gttactacttcaagcgataattgcctgcataatactgaggaattgggaattgaacaagaa
aatggcatttataacagtgacctgggtaatagtattagagttcccagctctgccagccag
tcatccacttccatggctgttcctttggaggtgcccagaagaggacagccccttttacag
atcaacaggcagcagattcagtccatctcatatagtgcacaggctgctgagctcaaaggt
ttaggagttgatgtctatgaccaggatgtattggagcaaggagttcttcagcaagtagat
aatgcaattaatgaagctaataaagcaacaaaaatagctgatgcagagaaagaatatcag
tcagtgctggatgacttaagatcatgtacaacatctctgaaacaaataagtaaaattatt
gagcaactttcacctcaagctgccgacaacaaagatataaacagaaaactagattctgta
aaacggcaaaaatataacaaggagcaacagctaaagaagatcaaagcaaaacaaaagcgt
ctccaagcaattcttggtggaacagagattcttgataaagtaaatgagattgaattagag
gaagatgaagaacctggtccatcatgtcttggcagtatgcttatgcctgttcaggaaaca
gagtgggaagagcttattcgtactggccagatgactccatttggaactaaaatacctcag
aagcctgagaggaagacacgacgattaatgctaaatgaagcttctgattttgagaaatac
ttagcagaccaagctaagctgtcatctgaaagaaagaagttatcccttcacaaaggagca
aagaagaaagcacaagccaaaaatgtccagtgcgtagctcccgcatctactacaaaggaa
aaaaggggtaaagccctgtcaaaaacagataagcgcttaaaaaaacacatgagaaaactt
cagaagcatgcccttcagattcagtcaaaggcagagattccaaaagaaaagaaatacctt
gaggccaagaagttcaggcgtgaacaggaggatgatagtggagagtctgagtatgtacct
gatgaggagctctttgatccagaagcagcagaagaggaggaagagcaggcatcttctcat
gttgagaatgattctgatgatgaactcaggaatttgtcaagaaaaaagaaatatttggtg
aagagagattttaaagaagctgaagatgatgctgacttctttccaagctctgaggaagaa
gagcatacactggggaagcgcaaagtaaagagatggagagatgatggagatgaagactat
tataaacagagactaaggaggtggcaaaaagaacgtttgaaggacaaagaacatcaaaca
gctgaggaactttctgaagaaagtgatgctgactttgaagagggtttcaaagtaccagga
tttctcttcagaaagctttttaagtaccagcagacaggtgttaggtggctctgggaattg
cactgccagcaggcaggaggaattctgggagatgagatgggattgggcaagaccatccag
ataattgccttcttggcaggtctgagctacagcaagatcaggactcgcggttcaaattac
aggtaccagggattgggtccaacagtgattgtttgtccagctactgtgatgcatcagtgg
gtaaaagaattccacacttggtggcctccatttagagtcgctattctccatgaaactggt
tcttataccaacaaaaaggtgaaactaattcatgaaattgcttcatgccatggaatttta
attacgtcttattcatacattcgaatgatgcaggataacatccacagctatgactggcat
tatgtgattctggatgagggtcacaaaatccgaaatccaaatgcggcagtcacacttgca
tgcaagcagttccgcacaccccatcgaatcatcttgtctggctcccctatgcaaaataac
ctaaaggagctctggtctctctttgactttgtattcccagggaaattgggaacactacct
gtgttcatggagcaattttctgttccaataaccatgggaggatattccaatgcctctcct
gtccaggtaaaaactgcatacaaatgtgcctgtgtgttacgagacaccataaacccctac
ttgctgcgaagaatgaaggctgatgtaaaaatgagcctttcgcttccagataaaaatgaa
caggtcctcttttgccgtttgacagatgagcagcgtcaagtctatcaaaatttcatcaac
tctaaagaagtttaccagattctcaatggagacatgcagattttctcaggactagtagct
ttgagaaagatttgcaaccaccctgacctcttctctggtggtcccaggattttgaagtgc
gtaccagatgctgaagtggaggaagcagatcagtttggatattggaaacgttctggaaaa
atgatagtggtagaatccttgctgaaaatatggcacaagcaaggtcacagagtgttgttt
tttactcagtcaagacagatgttgcagatacttgaagtctttgtgagagacagaaactat
tcctacctcaggatggatggtaccacagcaatagcttcgagacagccccttataacaaga
tataatgaggacaaatccgtatttgtttttcttctaacaactcgtgttggtggcattgga
gttaacttgactggtgctgaccgggttattatttatgatcctgactggaatcccagtaca
gacacacaggctcgtgaacgtgcttggagaataggccaaaagaaacaagtgactgtgtat
aggcttctcactgcaggtactattgaagagaagatataccacagacaaatcttcaaacag
tttttaacgaacagagtgctgaaagaccctaagcagaggcgctttttcaaatccaatgac
ctttatgaactttttactctgagcagcccagatgtgtctcaggggacagaaacaagtgca
atttttgcaggtactggttcagatgttcaagtcccaaaacaccaattgaaacggaaactt
gaaaagccacctgatagtgacacttctaaaggtgatctccatcttacagaaagcagctca
ccaaagtacagcaagtcatccaattcctactcaaccacccacatgacaaatgattcttct
aaagcaatagagacaagtgaggaaacccaaggaaatttggaagcctttgaccaaaatagc
tctgcaaaagataatgcacaagctgctactaatataaattcattgaataaaagcaaggag
gaaagcttggaaagagctgagaaatctatgtcccagtcattgccaggtgatgcagggtct
tccgagaatgccacatgtctgaacaccacggtggctgatgaagtacatggagcagctaat
gcaaatgttaagggagattttagccttccatgtggtgcagctggctcttgggaaaagcac
gttgctaaaactgaagatgcgcaattagataataatcattataaatgtacctcaaaaaca
aagcacagggtggatgcgctgtcacatgagagccacaaagataagtctaagaagaaacat
cacaaagatgccaaatttgaaggagaacgcattcctcatctagtgaaacaaaagcaatac
agaagggagaacagtgaagagaaggaggaagactcaaagaaaaatgatgattacgtcttg
gagaaacttttcaaaaaatcaggggtacacagtgttatgaagcatgatgccattatggaa
gcttccagtgcagatcatgtgctggtggaagcagaagcaagcagagtggcccaggatgcc
ttaagagccttaaaagtctctcgacagcgatgtttaggagctgcttctggtgtgccgacc
tggacaggcatgagtggtctttcaggtgcaccatcaggaataaagagtcgatttggtcaa
aaaagaaaccccatgctactttcttcacattccacttatgcatcacctgcgaagaagtgc
aaggatgcagacccaataaagaaagaaaatgtaaagaagtgtagttccaatgggcacttt
gatggaaaatctggagaatcatcgtccagtgcgctagactcttcatctttattagctaag
atgagggcaagaaaccatcttcttttaccacaacagacagggaatgagggagatgagaat
catcagcgagcacctgccccagcctcgggttcaacagaatatgatgaactgcttgtggat
gtgcgtaacttcatagcattccaggcccgcgtggacggcgaggctagcactcgggaacta
ctgcaagaatttgagtccaaactgcctgcggcgcagtcctgcatctttagagaacttctc
cgcaatctctgcaccttccataggagcccgaacggtgaaggtgtctggaggctaaagcca
gaattccgctga

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