Gymnogyps californianus (California condor): 127017937
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Entry
127017937 CDS
T08687
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127017937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gcl03036
]
127017937
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127017937
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127017937
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
127017937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
127017937
NCBI-ProteinID:
XP_050755222
LinkDB
All DBs
Position
6:20678834..20726810
Genome browser
AA seq
1523 aa
AA seq
DB search
MRNFVCVNVLMMMWFFFVAFEQRMPTDNSHLPDGIQEQDPVTTSSDNCLHNTEELGIEQE
NGIYNSDLGNSIRVPSSASQSSTSMAVPLEVPRRGQPLLQINRQQIQSISYSAQAAELKG
LGVDVYDQDVLEQGVLQQVDNAINEANKATKIADAEKEYQSVLDDLRSCTTSLKQISKII
EQLSPQAADNKDINRKLDSVKRQKYNKEQQLKKIKAKQKRLQAILGGTEILDKVNEIELE
EDEEPGPSCLGSMLMPVQETEWEELIRTGQMTPFGTKIPQKPERKTRRLMLNEASDFEKY
LADQAKLSSERKKLSLHKGAKKKAQAKNVQCVAPASTTKEKRGKALSKTDKRLKKHMRKL
QKHALQIQSKAEIPKEKKYLEAKKFRREQEDDSGESEYVPDEELFDPEAAEEEEEQASSH
VENDSDDELRNLSRKKKYLVKRDFKEAEDDADFFPSSEEEEHTLGKRKVKRWRDDGDEDY
YKQRLRRWQKERLKDKEHQTAEELSEESDADFEEGFKVPGFLFRKLFKYQQTGVRWLWEL
HCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQW
VKEFHTWWPPFRVAILHETGSYTNKKVKLIHEIASCHGILITSYSYIRMMQDNIHSYDWH
YVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLP
VFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNE
QVLFCRLTDEQRQVYQNFINSKEVYQILNGDMQIFSGLVALRKICNHPDLFSGGPRILKC
VPDAEVEEADQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNY
SYLRMDGTTAIASRQPLITRYNEDKSVFVFLLTTRVGGIGVNLTGADRVIIYDPDWNPST
DTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSND
LYELFTLSSPDVSQGTETSAIFAGTGSDVQVPKHQLKRKLEKPPDSDTSKGDLHLTESSS
PKYSKSSNSYSTTHMTNDSSKAIETSEETQGNLEAFDQNSSAKDNAQAATNINSLNKSKE
ESLERAEKSMSQSLPGDAGSSENATCLNTTVADEVHGAANANVKGDFSLPCGAAGSWEKH
VAKTEDAQLDNNHYKCTSKTKHRVDALSHESHKDKSKKKHHKDAKFEGERIPHLVKQKQY
RRENSEEKEEDSKKNDDYVLEKLFKKSGVHSVMKHDAIMEASSADHVLVEAEASRVAQDA
LRALKVSRQRCLGAASGVPTWTGMSGLSGAPSGIKSRFGQKRNPMLLSSHSTYASPAKKC
KDADPIKKENVKKCSSNGHFDGKSGESSSSALDSSSLLAKMRARNHLLLPQQTGNEGDEN
HQRAPAPASGSTEYDELLVDVRNFIAFQARVDGEASTRELLQEFESKLPAAQSCIFRELL
RNLCTFHRSPNGEGVWRLKPEFR
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacttcgtgtgtgtgaatgttcttatgatgatgtggttcttctttgttgccttt
gagcagaggatgccaacagacaacagccacctgccagacggtatccaagaacaagaccct
gttactacttcaagcgataattgcctgcataatactgaggaattgggaattgaacaagaa
aatggcatttataacagtgacctgggtaatagtattagagttcccagctctgccagccag
tcatccacttccatggctgttcctttggaggtgcccagaagaggacagccccttttacag
atcaacaggcagcagattcagtccatctcatatagtgcacaggctgctgagctcaaaggt
ttaggagttgatgtctatgaccaggatgtattggagcaaggagttcttcagcaagtagat
aatgcaattaatgaagctaataaagcaacaaaaatagctgatgcagagaaagaatatcag
tcagtgctggatgacttaagatcatgtacaacatctctgaaacaaataagtaaaattatt
gagcaactttcacctcaagctgccgacaacaaagatataaacagaaaactagattctgta
aaacggcaaaaatataacaaggagcaacagctaaagaagatcaaagcaaaacaaaagcgt
ctccaagcaattcttggtggaacagagattcttgataaagtaaatgagattgaattagag
gaagatgaagaacctggtccatcatgtcttggcagtatgcttatgcctgttcaggaaaca
gagtgggaagagcttattcgtactggccagatgactccatttggaactaaaatacctcag
aagcctgagaggaagacacgacgattaatgctaaatgaagcttctgattttgagaaatac
ttagcagaccaagctaagctgtcatctgaaagaaagaagttatcccttcacaaaggagca
aagaagaaagcacaagccaaaaatgtccagtgcgtagctcccgcatctactacaaaggaa
aaaaggggtaaagccctgtcaaaaacagataagcgcttaaaaaaacacatgagaaaactt
cagaagcatgcccttcagattcagtcaaaggcagagattccaaaagaaaagaaatacctt
gaggccaagaagttcaggcgtgaacaggaggatgatagtggagagtctgagtatgtacct
gatgaggagctctttgatccagaagcagcagaagaggaggaagagcaggcatcttctcat
gttgagaatgattctgatgatgaactcaggaatttgtcaagaaaaaagaaatatttggtg
aagagagattttaaagaagctgaagatgatgctgacttctttccaagctctgaggaagaa
gagcatacactggggaagcgcaaagtaaagagatggagagatgatggagatgaagactat
tataaacagagactaaggaggtggcaaaaagaacgtttgaaggacaaagaacatcaaaca
gctgaggaactttctgaagaaagtgatgctgactttgaagagggtttcaaagtaccagga
tttctcttcagaaagctttttaagtaccagcagacaggtgttaggtggctctgggaattg
cactgccagcaggcaggaggaattctgggagatgagatgggattgggcaagaccatccag
ataattgccttcttggcaggtctgagctacagcaagatcaggactcgcggttcaaattac
aggtaccagggattgggtccaacagtgattgtttgtccagctactgtgatgcatcagtgg
gtaaaagaattccacacttggtggcctccatttagagtcgctattctccatgaaactggt
tcttataccaacaaaaaggtgaaactaattcatgaaattgcttcatgccatggaatttta
attacgtcttattcatacattcgaatgatgcaggataacatccacagctatgactggcat
tatgtgattctggatgagggtcacaaaatccgaaatccaaatgcggcagtcacacttgca
tgcaagcagttccgcacaccccatcgaatcatcttgtctggctcccctatgcaaaataac
ctaaaggagctctggtctctctttgactttgtattcccagggaaattgggaacactacct
gtgttcatggagcaattttctgttccaataaccatgggaggatattccaatgcctctcct
gtccaggtaaaaactgcatacaaatgtgcctgtgtgttacgagacaccataaacccctac
ttgctgcgaagaatgaaggctgatgtaaaaatgagcctttcgcttccagataaaaatgaa
caggtcctcttttgccgtttgacagatgagcagcgtcaagtctatcaaaatttcatcaac
tctaaagaagtttaccagattctcaatggagacatgcagattttctcaggactagtagct
ttgagaaagatttgcaaccaccctgacctcttctctggtggtcccaggattttgaagtgc
gtaccagatgctgaagtggaggaagcagatcagtttggatattggaaacgttctggaaaa
atgatagtggtagaatccttgctgaaaatatggcacaagcaaggtcacagagtgttgttt
tttactcagtcaagacagatgttgcagatacttgaagtctttgtgagagacagaaactat
tcctacctcaggatggatggtaccacagcaatagcttcgagacagccccttataacaaga
tataatgaggacaaatccgtatttgtttttcttctaacaactcgtgttggtggcattgga
gttaacttgactggtgctgaccgggttattatttatgatcctgactggaatcccagtaca
gacacacaggctcgtgaacgtgcttggagaataggccaaaagaaacaagtgactgtgtat
aggcttctcactgcaggtactattgaagagaagatataccacagacaaatcttcaaacag
tttttaacgaacagagtgctgaaagaccctaagcagaggcgctttttcaaatccaatgac
ctttatgaactttttactctgagcagcccagatgtgtctcaggggacagaaacaagtgca
atttttgcaggtactggttcagatgttcaagtcccaaaacaccaattgaaacggaaactt
gaaaagccacctgatagtgacacttctaaaggtgatctccatcttacagaaagcagctca
ccaaagtacagcaagtcatccaattcctactcaaccacccacatgacaaatgattcttct
aaagcaatagagacaagtgaggaaacccaaggaaatttggaagcctttgaccaaaatagc
tctgcaaaagataatgcacaagctgctactaatataaattcattgaataaaagcaaggag
gaaagcttggaaagagctgagaaatctatgtcccagtcattgccaggtgatgcagggtct
tccgagaatgccacatgtctgaacaccacggtggctgatgaagtacatggagcagctaat
gcaaatgttaagggagattttagccttccatgtggtgcagctggctcttgggaaaagcac
gttgctaaaactgaagatgcgcaattagataataatcattataaatgtacctcaaaaaca
aagcacagggtggatgcgctgtcacatgagagccacaaagataagtctaagaagaaacat
cacaaagatgccaaatttgaaggagaacgcattcctcatctagtgaaacaaaagcaatac
agaagggagaacagtgaagagaaggaggaagactcaaagaaaaatgatgattacgtcttg
gagaaacttttcaaaaaatcaggggtacacagtgttatgaagcatgatgccattatggaa
gcttccagtgcagatcatgtgctggtggaagcagaagcaagcagagtggcccaggatgcc
ttaagagccttaaaagtctctcgacagcgatgtttaggagctgcttctggtgtgccgacc
tggacaggcatgagtggtctttcaggtgcaccatcaggaataaagagtcgatttggtcaa
aaaagaaaccccatgctactttcttcacattccacttatgcatcacctgcgaagaagtgc
aaggatgcagacccaataaagaaagaaaatgtaaagaagtgtagttccaatgggcacttt
gatggaaaatctggagaatcatcgtccagtgcgctagactcttcatctttattagctaag
atgagggcaagaaaccatcttcttttaccacaacagacagggaatgagggagatgagaat
catcagcgagcacctgccccagcctcgggttcaacagaatatgatgaactgcttgtggat
gtgcgtaacttcatagcattccaggcccgcgtggacggcgaggctagcactcgggaacta
ctgcaagaatttgagtccaaactgcctgcggcgcagtcctgcatctttagagaacttctc
cgcaatctctgcaccttccataggagcccgaacggtgaaggtgtctggaggctaaagcca
gaattccgctga
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integrated database retrieval system