KEGG   Gymnogyps californianus (California condor): 127018128
Entry
127018128         CDS       T08687                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
gcl  Gymnogyps californianus (California condor)
Pathway
gcl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gcl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127018128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gcl03041]
    127018128
   03036 Chromosome and associated proteins [BR:gcl03036]
    127018128
Spliceosome [BR:gcl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    127018128
 Complex B
    127018128
 Complex C
   U2 SnRNP specific factors
    127018128
Chromosome and associated proteins [BR:gcl03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    127018128
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Adaptin_N UNC45-central DUF2298 TALPID3
Other DBs
NCBI-GeneID: 127018128
NCBI-ProteinID: XP_050755457
LinkDB
Position
7:complement(12163847..12188398)
AA seq 1301 aa
MAKIAKTHEDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKK
HRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHT
GIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIES
FDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANK
VGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQ
TTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFG
CEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRD
VYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq 3906 nt   +upstreamnt  +downstreamnt
atggcgaagatcgccaagacccacgaagatattgaagcacaaattcgagaaattcaagga
aaaaagcctgctcttgatgaagcacaaggagtaggccttgattccacaggatattatgat
caagaaatttatggtggcagtgacagcaggtttgctggatacgtcacttctattgcagca
actgaattggaagatgatgatgatgactacccttctacaagtttacttggccagaagaag
ccagggtaccatgctccagtggcattgcttaatgacataccacagtctactgaacagtat
gatccttttgcagaacaccgtcctcaaaagattgcagatcgggaagatgagtacaaaaag
cacaggcggatgatgataatttcccctgagcgtcttgatccttttgcagatggagggaag
acaccagatcctaaaatgaatgccagaacatacatggatgttatgcgtgaacagcattta
acaaaagaagagagggaaattaggcaacaactagctgaaaaagctaaagctggagaactt
aaagtcgtcaatggagctgcatctcagccaccttcaaaacgcaaacggcgttgggatcag
acagctgatcagactcctggtgctacacctaaaaaattatccagttgggatcaagcagag
actcctggacatacaccatctctgcgatgggatgaaactccaggccgtgcaaagggtagc
gaaactcctggtgccaccccaggctcaaaaatatgggatccgactcccagtcatacacca
gcaggagctgcaacacccggacgggacacgcctggtcatgcaacaccaggccatggaggt
gccacttccagtgcacgtaaaaatcgatgggatgaaacacctaaaacagaaagagatact
ccgggacatggcagtggatgggctgagacgcctcgtacagatagaggtggtgactccatt
ggtgagacaccaaccccaggagcaagtaaaagaaagtcgcgatgggatgaaacacctgct
agccagatgggtggcagcactcctgttctgacacctggcaaaacacccattggtacacca
gctatgaacatggcaactcctacaccaggtcatatcatgagcatgactcctgaacaactg
caggcttggcgttgggaaagggaaattgatgagagaaacagaccactttctgatgaagaa
ttggatgctatgtttccagaaggatataaggttcttcccccaccagctggttatgtacct
attcgcactccagctcgtaagcttacagcaactccaacacctttgggtggtatgactgga
ttccacatgcagacagaagacaggactatgaagagtgttaatgaccagccatctggcaat
cttccattcctaaaaccagatgatatccaatactttgataaactgctggttgatgttgat
gaatcaactctgagtcctgaagaacagaaggagagaaaaataatgaaattacttctgaaa
ataaagaatggcacacctcccatgagaaaggctgcgttgcgacaaattactgataaagct
cgggaatttggagcagggccgttgtttaatcagattctgcctctgctgatgtcaccaaca
cttgaagatcaggagcgtcacttgcttgtcaaagtcatcgacagaattctttacaaactg
gatgacttggtccgaccatatgtacacaagatccttgttgtcattgaaccactgctgatt
gatgaagactactatgctagagtggaaggcagagaaattatttcaaacttggctaaggct
gctggtttggccacaatgatctccacaatgcgacctgatattgataatatggatgaatat
gtccgaaatacaacagctcgagcctttgctgtcgttgcctctgctttgggcattccttct
ctgttgcccttcttgaaagctgtctgtaaaagcaagaaatcctggcaggctaggcatact
ggcatcaagattgtacagcagattgctattcttatgggttgtgctatcttgcctcatctc
aggagcttggttgaaatcattgaacatggtctggtggatgagcagcagaaagttcgcacc
atcagtgctttggctattgctgctttggctgaggcagctactccctatggtattgagtca
tttgattctgttctgaagcctttatggaagggtatacgtcaacacagaggaaagggtttg
gctgcctttttgaaggctattggttacctgattccactcatggatgctgagtatgcaaac
tattataccagagaagtcatgctaatccttatcagagagttccagtctcctgatgaagag
atgaaaaaaattgtgttgaaggtggtaaagcagtgttgtggtacggatggtgttgaagca
aactacattaaaacagaaatcttgccaccttttttcaaacacttctggcagcacagaatg
gcattggacagaagaaattacagacagttggttgatacaactgtggagctggcaaataaa
gttggagcagcagaaattatttctagaattgtggatgatctgaaagatgaggctgagcag
tatagaaaaatggtcatggaaacaattgagaagataatgggaaatctgggagcagcagac
attgatcacaaactggaagaacaacttattgatggtatcttgtacgcctttcaggaacag
accacagaggattctgtgatgctgaatggttttggcacagtggttaatgctctaggcaaa
agagttaaaccctacttgccacaaatctgtggtacagttttgtggcgtttgaacaacaaa
tcagctaaagttaggcagcaggctgctgacctgatctctcgtactgcagttgtcatgaag
acttgtcaagaggaaaaactgatgggacacttgggtgttgtgttgtatgagtacctgggt
gaagaatatcctgaagtactgggcagcatactcggagcacttaaggctattgtgaatgtt
ataggtatgcacaagatgacaccaccaatcaaagatctgctgccacgacttacacctatt
ttgaagaacaggcatgagaaagtacaggaaaattgtattgaccttgttgggcgcattgca
gaccgaggtgcagaatatgtttctgcaagagaatggatgaggatctgctttgaactgctt
gaattattaaaagctcacaagaaagctatccgaagagccacagtgaacacttttggttat
attgcgaaggctattggacctcacgatgtgttggctacactgctaaataacttgaaagta
caggaaaggcagaacagagtatgtactacagtagcaattgctattgtcgctgaaacatgc
tcacctttcacagtgctgcctgcactcatgaatgaatacagagttccagaactgaatgtc
cagaatggtgtgttaaaatctctttctttcctgtttgaatacattggagagatgggaaaa
gattacatttatgctgttacaccattgcttgaagatgctttaatggacagggatcttgta
cacagacagacagccagtgccgtggtgcagcatatgtctcttggtgtttatgggtttggc
tgtgaagattcccttaatcatttgttaaattacgtatggcctaatgtatttgaaacctct
cctcacgtcattcaggcagttatgggggctctggagggcctcagagttgctattggtccc
tgcagaatgttgcagtattgtttacagggtttgtttcaccctgccaggaaagtcagagac
gtttattggaagatttataattcgatctacatcggatcacaggatgctctgatagcacat
tatccaagaatctataacgatgaaaagaacacctatattcgttatgaacttgattacatc
ttataa

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