Gymnogyps californianus (California condor): 127018298
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Entry
127018298 CDS
T08687
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04510
Focal adhesion
gcl04512
ECM-receptor interaction
gcl04518
Integrin signaling
gcl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127018298
04518 Integrin signaling
127018298
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127018298
09142 Cell motility
04820 Cytoskeleton in muscle cells
127018298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gcl04147
]
127018298
00536 Glycosaminoglycan binding proteins [BR:
gcl00536
]
127018298
Exosome [BR:
gcl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127018298
Glycosaminoglycan binding proteins [BR:
gcl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127018298
Hyaluronan
Extracellular matrix or blood plasma proteins
127018298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
DUF1194
VWA_3
vWA-TerF-like
DUF5507
Motif
Other DBs
NCBI-GeneID:
127018298
NCBI-ProteinID:
XP_050755794
LinkDB
All DBs
Position
7:complement(688636..714637)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRLRDFLLTLLLPAGFLGGGSWAQRPEIATRVANAEDCPVDLFFVLDTSESVALRVKPFG
DLVAQVKDFTNRFIDKLTNRYYRCDRNLVWNAGALHYSDDVVLIKSLTSMPSGRNELKNR
VSAVNYIGKGTYTDCAIKRGIEELLISGSHHKENKYLIVVTDGHPLEGYKEPCGGLDDAA
NEAKHLGIKVFSVAISPNHLDQRLNIIATDHAYRRNFTATSLKPTRELDVEETINTIIDM
IKVNTEQSCCSFECQPPRGPPGLPGDPGNEGERGKPGLPGEKGDAGDPGRPGDMGPVGYQ
GMKGDKGSRGEKGSRGAKGAKGEKGRRGIDGIDGMKGEAGYPGLPGCKGSPGFDGAQGPP
GPKGDPGAYGPKGGKGEPGDDGKPGRQGIPGSPGEKGAPGNQGEPGPIGETGDEGAPGVD
GPPGERGSNGERGPPGSPGDRGPRGEQGEPGPPGDQGREGPLGPPGEQGEAGPPGPKGYR
GDDGPRGNEGPKGLPGAPGLPGDPGLMGERGEDGPPGNGTIGFTGAPGQLGDRGDPGING
TKGYVGPKGDEGEAGDPGNDNPTPGPRGIKGAKGHRGPEGRPGPPGPVGPPGPDECEILD
IIMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEAGES
RVGVVQYSHDNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTYTGEALQFTKDNLLRRF
TSDNRVAIVITDGRSDTLRDPTPLSSLCDVTPVVSLGIGDIFRNPPNPDHLNDIACLSRP
TRPGLSIQRDNYAELLDDTFLQNITSYVCQEKKCPDYTCPIAFNGLADITLLVDSSTSVG
SKNFETTKKFVKRLAERFLEAGKPADDAVRVSVVQYSGRNQQKVEAQFQHNYTVIAKAID
NMEFINDATDVNAALRYVTGLYQQSSRGGAKKRVLVFSDGNSQGITARAIERAVQEAQQA
GIEIYVLAVGSQANEPNIRVLVTGKSADYDVVYGERHLFRVPDYTSLLRGVFYQTVSRKI
AVD
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcgagactttctactcactttgctgctcccggccggcttcctgggggggggc
tcgtgggctcagcgcccagaaattgccacccgggtcgcaaacgcagaagactgccccgtg
gacctgttcttcgtcctggacacctcagagagcgttgccctaagggtgaagccctttggg
gatctggttgcccaagtgaaagatttcaccaaccggttcattgataagctgacaaacagg
tactaccgctgcgaccgcaacctggtgtggaacgccggggcgctgcactacagcgacgat
gtcgtgctcatcaagagcctcacctcgatgcccagcggccggaacgagctgaagaaccgc
gtctcggccgtgaactacatcgggaagggcacctacaccgactgtgccatcaagcggggc
atcgaggagctgctcatcagcggctcccaccacaaggagaataaatacctgatcgtggtg
actgatggacaccccttggaagggtacaaggagccctgcggaggcctggatgatgctgcc
aatgaagccaaacatttggggatcaaagtgttctccgtcgccatctcccccaaccacctg
gaccagcggctcaacatcatcgccacggaccatgcctaccgccgcaacttcaccgccacc
agcctgaagccaacccgggagctcgacgtggaggaaaccatcaacaccatcatcgacatg
attaaagttaacacggagcaatcgtgctgctccttcgagtgccagcctccccgagggccc
cccggacttcccggcgacccgggcaatgagggagaaagaggcaagccaggtcttcccggt
gagaaaggagatgctggagacccaggcaggccaggggacatgggacctgttggctaccaa
ggaatgaagggtgacaaaggaagtcgaggagaaaagggctcgagaggagccaaaggagcc
aagggtgagaagggcaggcgtggaatcgatggcatcgatggcatgaagggtgaagctgga
taccctgggttacctggctgcaaaggctcaccaggattcgacggagctcaaggccctcct
ggaccgaagggagatcccggtgcttacggacccaagggaggaaagggggagcctggggac
gatggaaaacctggccgacaggggattcccggcagccctggagagaagggtgcacctgga
aaccagggtgagcctggaccgataggagagacgggtgatgagggcgctccaggcgtggat
ggtcctcctggagaacggggcagcaatggagaaagaggacccccgggctcgccgggcgac
cgcgggccaagaggagagcagggagagcctggacctcctggtgaccaagggcgggaagga
cccctcggaccacctggcgaacagggcgaggctggacccccaggacccaagggctacagg
ggagacgacggcccccgcggcaatgagggcccaaagggattgcctggagcacctggactg
cctggagaccctggcctgatgggagaaaggggggaggatggccctcctgggaacggcacg
attggattcacaggcgccccggggcagctaggagacagaggtgaccctggcattaatgga
acgaaaggctatgtcggtcctaaaggtgatgaaggagaagctggagaccctggcaatgat
aacccaacccctggccccaggggcatcaaaggagcgaagggccacaggggacctgaaggc
cgcccgggaccaccaggacctgtggggcctccgggaccagatgaatgtgaaatcttggac
atcatcatgaagatgtgctcttgctgcgagtgcacctgcggtcccgtcgacctcctcttc
gtgttggacagctcggagagcatcggcctgcagaacttccagattgccaaggacttcatc
atcaaagtcatcgaccgcctgagcaaggacgagcgtgtgaagtttgaagctggggagtcc
cgtgtgggcgttgtgcagtacagccacgacaacacgcaggagctggtggccatgggggat
gccaacatagacaacatcggggcgctcaagcaggcagtgaagaacctgaagtggatagct
gggggcacctacactggagaagccctgcagttcaccaaggacaacctgctgcggagattc
acctctgacaatcgcgtcgctatcgtcatcacggacggacgctccgacacgctgcgggac
cctaccccgctaagctctctgtgcgatgtcaccccggtggtttccctcgggataggtgac
attttccggaaccctccaaatccagatcacctgaatgacatcgcttgtttaagcagaccg
accaggccaggactgtccattcaaagggacaactacgccgagctcctggatgacaccttc
ttgcagaacatcacctcgtacgtctgccaagagaagaaatgtccggactacacctgccca
attgccttcaacgggctggcggacatcacgctgctggtggatagctccaccagtgtgggg
agcaagaacttcgagaccaccaagaagtttgtgaagcggctggcggagcggttcctggag
gccggcaagcctgctgatgatgccgtacgtgtctcagtggtccagtacagcggcaggaac
cagcagaaagtggaagctcagttccagcacaactacacggtcatcgccaaagccatcgac
aacatggagttcattaacgacgccacggacgtcaacgccgctctgcggtacgtcacgggg
ctgtaccagcagtcctcccgtggtggggcgaagaagagggtgctggtgttttctgatggc
aactctcaagggatcaccgcgagggccattgagagggctgtgcaggaagctcagcaagct
ggcatcgagatctacgtgctggcagtgggcagccaagccaacgagcccaacatccgtgtc
ctggtcacggggaagagcgcagattacgatgtggtctacggggagcgccacctcttccgt
gtgcccgactatacctctctgctgcgtggcgtcttctaccaaactgtctccaggaagata
gctgttgactga
DBGET
integrated database retrieval system
