Gymnogyps californianus (California condor): 127018359
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Entry
127018359 CDS
T08687
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04622
RIG-I-like receptor signaling pathway
gcl05164
Influenza A
gcl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127018359
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127018359
05168 Herpes simplex virus 1 infection
127018359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gcl04054
]
127018359
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127018359
Pattern recognition receptors [BR:
gcl04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
127018359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
DUF3638
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
127018359
NCBI-ProteinID:
XP_050755906
LinkDB
All DBs
Position
7:24906342..24935049
Genome browser
AA seq
1008 aa
AA seq
DB search
MAEESRDERFLYMISCFRPRLKQFIRVQPVLDRLPSLSVKDREKVRAAALQRGEVEGAEE
LLRAVERGPRGCGWFYEFLQALEQGGCSLAACYVNPSLSQLPSPAEEADHDLCVHLVQLL
YSTLVDRMQTMQVAEKCLQMGIFQDEDLDRIHTVTDNHGNRDGARELLSRIVQKKDWFSP
FLIALRETQHGGLADDLSGNTGGTENRQNGMKNSTNEETEVTSQAGYAVVEDLKQQKNVN
DSFSSENSVLETSIGKNSVVSESDVSIGDGSVSNLNENLGQSYTTSDSDEDEVESRASPE
PDLILRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKKRASEPGKVIVLV
NKVPLVEQHLRKEFNPFLKRWYQVIGLSGDSQLKISFPEVVRRNDVIISTAQILENSLLN
AAEEDEEGVHLSDFSLIIIDECHHTQKEGVYNNIMRRYLKEKMKNRKLAKENKPLIPQPQ
ILGLTASPGVGGATSYSKAEEHILKICANLDARRIMTVEEHASQLKNQVKEPYKKTVIAD
DKRRDPFRERITEIMTDIQNYCQLHPKSEFGTQPYEQWVIREERKAAKEEKRKERVCAEH
LKKYNDALQINDTIRMVDAYNHLNNFYKEEKSKKTVMSDDDDDDEPAVSKQDETDEFLIG
LFHAKKKQLKELARKPEYENEKLIQLRNTLMEEFTKTEEPRGIIFTKTRLSAFALFQWIK
DNPKFEEVGIKAHYLIGAGHNSEIKPMTQNEQREVIDKFRGGNVNLLIATTVAEEGLDIK
ECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDVNIFREKMMYKAIQ
RVQKMPQEEYLNKIQNFQLQSIVEKQMKAKRDQHKTYKKNPSLITFLCKNCHKLVCSGED
IQVIENMHHVSVKKDFQSLYCTGENKTLQDKHADYQTNGEIMCKGCGQAWGSMMVHRGLD
LPCLKIRNFVVVFEDKKTTKQIFKKWGELPVRFPSFDYAAHCPSSDED
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagtcccgagatgagcgcttcctctacatgatctcctgcttcaggccgcgg
ctgaagcagttcatccgggtgcagccggtgctggaccggcttccctcgctgagcgtgaag
gacagggagaaggtgcgggcggccgccctgcagcggggcgaggtggagggggcggaggag
ctgctgcgggccgtggagcggggaccccgcgggtgcggctggttctacgagttcctgcag
gcgctggagcagggcggctgcagcctagccgcctgctacgtcaaccctagcctcagccag
ctgccctcgccggccgaggaggccgaccacgacctctgcgtgcacttggtgcagctgctc
tacagcacgctggtggatagaatgcagactatgcaggtggccgagaagtgcctgcagatg
ggcatcttccaggatgaggacctggatcggatccacactgttactgacaatcatgggaac
agagatggtgcaagggagctattgagcagaatagtgcagaagaaggattggttctctcct
tttttgattgctctgcgtgaaacccaacatggaggccttgcagatgatttaagcggaaat
acaggaggaacagagaatagacaaaatgggatgaagaacagtacaaacgaagaaacagaa
gttacaagccaagcaggatatgctgtagtggaggatttgaaacagcaaaaaaatgtgaat
gatagtttcagcagtgagaacagtgtattggaaacatctattggaaagaattctgtagtt
tcagagtcagacgtctccataggagatggaagtgtcagtaacttgaatgaaaacctggga
cagagctacacaaccagtgattcagatgaagatgaagtggagagtagagcttcacccgag
ccagatctcatcctgagagattaccagatggaagttgcaaagccagcactgaatggggag
aatattataatatgtctccctacaggcagtggtaaaaccagagtggctgtttacattacc
aaagatcacttggataagaagaaaagagcatcagagcctggaaaagttatagtacttgtt
aataaggtaccgttggtggaacagcatttacgaaaggagtttaatccattcctgaagcgt
tggtatcaggttattggtttaagtggtgattctcagctgaaaatctcatttcctgaagtt
gtcagaagaaatgatgtcatcatcagtacagcacagatccttgagaattcactgttaaat
gcagccgaagaagatgaagaaggtgtccacttatcagatttttcacttatcattatcgat
gagtgtcatcacactcaaaaggaaggagtctacaacaatataatgcgacgttacttaaaa
gaaaagatgaagaacaggaagctggcaaaagaaaacaaaccactgatcccacagcctcag
attctgggacttacagcctcacctggtgtaggaggtgcaacatcctactcaaaagctgaa
gaacatattctgaaaatctgtgccaatcttgatgcacgtagaatcatgactgttgaagag
catgcctcccaactgaagaatcaggtgaaggaaccgtataagaagactgtgattgcagat
gacaaaagaagggatccatttagagagagaattactgagatcatgacagacattcaaaac
tattgccagctccatccaaaatctgagtttggaactcagccatatgaacagtgggtgatt
agagaagagagaaaagctgcaaaagaagaaaaacgcaaggaacgtgtctgtgcagaacac
ttgaagaaatacaatgatgctctccagataaatgacaccatccgaatggtggatgcctac
aatcacctaaataatttttataaggaggagaaaagtaagaagacagtaatgagtgatgat
gatgatgatgatgaaccagcagtatcaaaacaggatgaaacagatgaatttctaataggt
ttatttcatgcaaaaaagaaacagctgaaagagttggctagaaagccagaatatgaaaat
gagaagctaatacagttgcgaaacactttaatggaggagttcacgaagactgaggaacct
agaggaattattttcacaaagactcggctaagtgcctttgctctgttccagtggattaag
gataacccaaaatttgaagaagtgggaattaaggcccattatcttatcggtgctggacat
aacagtgaaattaaacccatgactcagaatgagcaaagggaagttattgataaattccga
ggtggaaatgtaaatttactcattgctactactgtagctgaggaaggcctagacatcaaa
gagtgtaacatcgttattcgctatggccttgtcaccaatgaaattgctatggtgcaggct
cgcggtcgagctcgagctgatgagagcacctatgcacttgtggcttcgagtggctcagga
gctgttgaacgtgaagatgttaatattttccgtgagaaaatgatgtataaggccattcag
cgtgtccagaagatgccacaggaagagtatttaaataagattcagaatttccagttgcaa
agtatagtggaaaaacaaatgaaggcaaagagagatcagcacaagacgtacaagaaaaat
ccttcactaataacattcctatgcaaaaattgccacaagcttgtatgttctggagaagac
atacaagttattgaaaacatgcatcatgtcagtgtgaaaaaagatttccaaagtctttac
tgtacaggagaaaataagacactgcaagataagcatgctgattaccagacaaatggggaa
attatgtgtaaaggttgtggacaagcttggggaagtatgatggttcaccgaggtcttgac
ctgccttgtctaaagattagaaattttgtagttgtgtttgaagacaagaaaacaacaaag
caaatttttaagaaatggggagaactgcccgtcaggttccctagttttgattatgcagct
cattgtccttcaagtgatgaagattaa
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