Gymnogyps californianus (California condor): 127018495
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Entry
127018495 CDS
T08687
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127018495
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127018495
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
127018495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-rbx1
PDZ_Tricorn
TRAF3_RING
Prok-RING_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
127018495
NCBI-ProteinID:
XP_050756134
LinkDB
All DBs
Position
1:complement(186342102..186597293)
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AA seq
1045 aa
AA seq
DB search
MGFDPSRFAAPVAAELQCKLCGRVLEEPLSTPCGHVFCAGCLLPWAARRRRCPLRCQPLA
AAELRPVLPLRSLVQKLEVKCDYSPRGCGRTVRLRELPAHLAACRYGPPPTGPAEPEPPG
GPPPGRSGGGSAEQPRRPGPGAPPGPRAGGGHRCLRALRGGGSPEPGPELKREALRWSRR
EKSLLAQLSALQSEVQLTARRYQAKFGQYMSHISSITRDLAGSQPGKGGEPKPLTIMLHR
ENDTLGFNIIGGRPNQNNQEESAEGIYVSKILENGPADKAEGLQIHDKIIEINGKDISKA
THEEAVEAFRNAKEPIVVQVLRRAPTSKAHGSSQDVRLVDASTQTDITFEHIIALAKLRP
STPPVPDICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPADADRTEDFEYEEVELCRISSQ
EKLGLTVCYRTDDEEDTGIYVSEVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALL
SSEECKKIVLLVARPEMQLEEGWLDDERNEFLEELNLEMLEEQHNEAMQYTANEVEQPKK
HEEEDGTTDTATSSSNNHEKDSGVGPTDESLRNDESSEQENAPEEQNSATLQSKRELGHS
QDTLGSVELQCNESFVSGEYIESDFVGNPEEECERFRQLLELKCKIRNHGEYDLYYSSSM
IECNRREQDGVEHELQLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWALHDEGFRNYN
TSIDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVERSPDNSLQRMISITNRKN
LRSTIVANQSSSGQSNRETTSAKTKPTEQNSAAENAVLASESSKFTDQEKQSSEHIPYLS
PYHSSSYRYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKV
KIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLV
RAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQ
ELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccgtcgcgcttcgcggcgccggtggcggcggagctgcagtgcaagctg
tgcgggcgggtgctggaggagccgctgtccacgccgtgcgggcacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcggcggcgctgcccgctgcgctgccagccgctggcg
gccgccgagctgcgccccgtcctgcccctccgcagcctcgtccagaagctggaggtcaag
tgcgactacagcccgcggggctgcggccgcaccgtgcggctgcgggagctgcccgcccac
ctcgcggcgtgccgctacgggccgccgccgaccggccccgccgagccggagccgccgggc
gggcccccccccggccgctcggggggcggctccgccgagcagccgcggcggcccgggccg
ggggcgcccccggggccgcgggcgggcggggggcaccgctgcctgcgggcgctgcggggc
ggcggcagcccggagccgggtcccgagctgaagagggaggccctgcgctggagcaggagg
gagaagtcgctgctggcgcagctctcggcgctgcagagcgaggtgcagctgacggcgcgg
cggtaccaggcgaagttcggccagtacatgagccacatcagcagcatcacccgggacctg
gcgggcagccagcccggcaagggaggagaacccaaaccattaacaatcatgctacaccga
gaaaatgatactttgggattcaatattataggaggacgacccaatcagaacaatcaggag
gaatctgctgagggaatttatgtgtcaaagattttggaaaatggacctgcagacaaagca
gaaggcctgcaaattcatgacaagattattgagatcaatgggaaggacatctccaaggcc
actcatgaagaggcagtggaagcttttcgcaatgccaaggagccaattgtagttcaagtt
ttacgacgagccccaactagcaaagctcatggtagctctcaggatgttcggcttgtggat
gccagcactcagactgacatcactttcgagcacattatagctctggccaaactaaggcct
tccacaccgccagttcctgatatctgcccttttctactttcagacagctgccattctctt
cacccagtggagcacgaattttatgaaggtaatgagtatctttccagcctgcctgctgat
gcagatagaacagaggactttgagtatgaggaggtggagctgtgccgcattagcagccag
gagaagctggggctgactgtctgttacagaaccgacgatgaagaggacacggggatctat
gtcagcgaggttgatccaaacagcattgctgccagagatggccggatccgtgaaggagac
cgcattttgcaaataaatggccaagatgtccagaatcgagaagaggcagtggcgttgctc
tccagtgaagaatgcaagaaaattgtgttgcttgtcgcaagaccagagatgcagctggag
gaagggtggctggatgatgaaaggaatgaattcttagaggagttaaacttggaaatgttg
gaagagcagcataatgaagcgatgcagtacacagccaacgaggtggagcagccaaagaaa
catgaagaggaggatggcactacagacactgcaacctcgtcatccaacaatcatgagaag
gacagtggggtgggacctacagatgaaagtctgcgtaatgacgagagctcggagcaagaa
aatgcacccgaggagcagaacagcgctaccctgcagagcaaacgggagctgggccatagc
caagatacgttaggaagtgttgagctccagtgcaatgaaagctttgtgtctggggaatac
attgaatctgatttcgtaggaaacccggaggaggaatgcgaaaggtttcgccagctgtta
gaactgaagtgcaagattcgaaaccacggggagtatgacctgtattactcgagcagcatg
atagagtgcaacagaagagagcaagatggagtggagcatgagctacagctactcaatgag
gaactgaggaacatcgaacttgaatgtcagaatattatgcaagctcaccggctccaaaag
gtgagggatcagtacggagacatttgggctttacatgacgaagggttcaggaattataac
accagcatagatgtacaaagaggcaaactggatgacatcatggagcaccctgagaagtct
gacaaggacagctccagtgcctacaacacagctgaaagttgcaggagcactccgctgaca
gtggagcgatcccccgataactctctccagaggatgatcagcataaccaacaggaaaaac
ctgaggagcacaatcgtggctaatcagtcatcctcaggacaaagcaacagggagacaacc
tcagccaaaaccaaacccactgagcaaaacagtgctgctgagaacgcagtgctggcatca
gaaagcagcaaattcacagaccaggaaaagcagagcagcgagcatattccctacctgtct
ccatatcacagctcttcttacaggtacgggaatatacctgctcatgcaaagcattatcaa
agctatatgcaactgatccagcagaagtctgctgtggagtacgcgcaaagccagctcagc
ctggtgagcatgtgcaaagactcgcagaagtgtgcagagcccaagatggagtggaaagtg
aaaataaggagtgatgggacgaggtacatcacaaagagaccagttcgagacagaatcctg
aaggaacgtgccttaaaaattaaagaggagcgcagtgggatgacgacagatgatgataca
atgagtgagatgaagatgggtcgctactggagcaaagaagagcggaagcagcatttggtg
cgagctaaggagcagaggaggcggcgggagttcatgatgaggagcaggctggagtgtctt
aaggaaagtccgcagagtggcagcgagggcaaaaaggaaattaacattattgaactgagt
cacaaaaagatgatgaaaaagagaaacaagaaaatcttggacaactggatgacaatccaa
gaactgatgacacacggtgctaaatctccagatggcacaagagtgcacaatgccttttta
tcagttactactgtatga
DBGET
integrated database retrieval system
