Gymnogyps californianus (California condor): 127018551
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Entry
127018551 CDS
T08687
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04510
Focal adhesion
gcl04512
ECM-receptor interaction
gcl04518
Integrin signaling
gcl04810
Regulation of actin cytoskeleton
gcl04820
Cytoskeleton in muscle cells
gcl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127018551
04518 Integrin signaling
127018551
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127018551
09142 Cell motility
04820 Cytoskeleton in muscle cells
127018551
04810 Regulation of actin cytoskeleton
127018551
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127018551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127018551
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gcl04147
]
127018551
00536 Glycosaminoglycan binding proteins [BR:
gcl00536
]
127018551
04990 Domain-containing proteins not elsewhere classified [BR:
gcl04990
]
127018551
Membrane trafficking [BR:
gcl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
127018551
Exosome [BR:
gcl04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
127018551
Glycosaminoglycan binding proteins [BR:
gcl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127018551
Domain-containing proteins not elsewhere classified [BR:
gcl04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
127018551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
Fn3_Dep-1_2nd
fn2
Fn3_VIN3
Fn3_Dep-1_3rd
Interfer-bind
NDNF
FN3_Tor_3rd
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
127018551
NCBI-ProteinID:
XP_050756212
LinkDB
All DBs
Position
7:3977346..4031933
Genome browser
AA seq
2484 aa
AA seq
DB search
MPGRTVWRLALLALCLGAAAAEGGGGQRRGGGGKSRRQAQTTSVPQGTPAQGKQTCYDNG
KYYHINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPK
DSMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGE
WTCKPVAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDHDT
KTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLHTTSTGSGSPSFTNVQTALY
QPQPQQPQPQPYGQCITDNGVVYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAVTQTYGG
NSDGEACVLPFTYDGRTFYSCTTEGRTDGHLWCSTTSNFEQDRRYSFCTEQNVLVQTRGG
NSNGALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEICTTN
DGVMYRVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHK
RHDEGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGVRYQCYCYGRG
IGEWHCQPLQAYPGSTGPVQVIITESTNQPNSHPIQWNAPERSHITKYILRWRPKNSGRQ
WKEATIPGYQNSYTISGLKPGVIYEGQLISVQRYGHKEVTRFDFTTTSTTPVTSNTVSGE
TTLLPPVVATSESVTEITANSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATS
VNIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPDHTVESVDDTSIVISWSRP
QAPITGYRIIYTPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTPIFI
QQETTGVPHTDEVPSPKDLQFVEVSDIKITIMWTPPQSQVSGYRVEVIPVNRPGQHGQRL
PITRSSFAEVIDLLPGTTYLFKIFAVSHGRESKPLTGEQTTKLDAPTHLRFLNTTEHSVL
VLWTRPRAVITGYRLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVAVKDDLQ
STRETGVFTTYQPVGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREVISD
SGSIVISGLTPGVEYTYSLTVLMDGQERETPIVRRVTTPLSPPTNLRLEPNPDTGILVVS
WDRSTTPGISGYRVTTAPTNGQQGSTLEEVVGADQTTCTFENLNPGVEYNVSVYSVKDDQ
ESIPISETITQEVPQLTDLSFVDITDSSIGLRWTPLNASTIIGYRITVVAAGESVPIFED
FVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTM
RVTWTAPTSIVLSSFLVRYSPVKKEEDVAELTISPSDNMVILTNLLPGTEYLVRVYSVSE
QHESAPLSGIQKTGLDSPTGLDFSDITANSFTVHWIAPRATITGYKIRHHPEHSAGRPKE
DRVPPSRNSITLTNLLPGTEYVVSIIAINGREESMPLVGQQTTVSDVPRDLEVTPTSPTS
LVISWDAPAVTVRYYRITYGETGGSSPVQEFTVPGTMSTATITGLKPGVDYTITVYAVTG
RGDSPASSKPVTVTYKTEIDTPSQMQVTDVQDNSISIRWLPSTSPVTGYRVTAVPKKGHG
PTKTKNVPADQTQVTIEGLQPTVEYMVSVYAQNQNGESLPLVETAVTNIDRPKGLTFTEV
DVDSIKIAWESPQGQVTRYRVTYSSPEDGIHELLPAPGGEEDTAELHGLRPGSEYTINIV
AIYDDMESLPLTGTQSTAIPPPTNLKFTQVTPTSLTVNWNAPNVRLTGYRVRVNPKEKTG
PMKEINLSPDSTSAVVSGLMVATKYEVSVYALKDSLTSRPAQGVVTTLENVSPPRRARVT
DATETTITITWRTKTETITGFQVDAIPASGQSPIQRTISPDVRTYTITGLQPGNDYKIYL
YTLNENARSSPVVIDASTAIDAPSNLRFLTTTSNSLLVTWQPPRAKITGYIIRYEKPGSP
AKEVLPRPRPGTTEATITGLEPGTEYIIYIIAVKNNQKSEPLVGRKRTDELPTLITRPHP
NQPDILDVPSIDEGTPYLTNNRYDNGNGIQLPGTSGHPQTIGHQGQQVFFEEHGYRRPVP
TTATPLRPGSRRQPPNVDEAIEIPGYQVPIIVEPSYPHSRGPRRNDTTGQEALSQTTISW
RPLLESSEYIISCQPVSQDEDTLQFRVPGTSSSATLTGLTRGATYNIIVEALKDHRRQKV
LEEVVTVGNTVSEGLNQPADDTCFDTYTGSFYSIGEEWERLSETGFKLWCQCLGFGSGHF
RCDSSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCEPHETTCYDDGKMYQ
VGEQWQKEYFGAICSCTCYGGQQGWRCDNCRRPSVEVAPEGSAGHTYTQFTQRYHQATNT
NVNCPIECFMPLDVQADTQHPRGK
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccgcaccgtgtggcggctggcgctgctggctctctgcctgggggctgcagcg
gcggagggtggcggcggacagcgccgcggaggcggcggcaagagccggcggcaggcgcag
accacctcggtacctcagggcacccccgcgcagggcaagcagacctgttatgacaatgga
aaatactatcatataaaccagcagtgggagcgcatttacctgggaaacacgttggtctgt
acctgctatggtggaagcagagggtttaactgcgaaagcaagcctgaacctgaagagact
tgctttgacaaatacactggatccacttaccgagtaggggagacttacgagcgccccaag
gactccatgatctgggactgtacttgcattggagctggacgtgggagaatcagctgcacc
attgccaatcgctgccatgagggtggccagtcctacaagatcggcgatacctggcgccgg
ccccacgagactggcggctacatgctggagtgcgtgtgcctgggcaacgggaagggcgag
tggacctgcaagcccgtggctgagcgatgctacgacaacacggctgggacgtcctacgtg
gttggtgagacctgggagaagccctaccagggctggatgatggtggactgcacctgcctg
ggggagggcagcggccgcatcacctgcacctccagaaataggtgcaatgaccatgacacc
aagacttcctacagaattggagacacttggagcaagaaggataaccgtggaaacttgctt
cagtgtatctgtactggtaacggcagaggtgaatggaaatgcgaaagacacacgtccctg
catacaactagcactggatctggctctcctagcttcacaaatgtgcagactgcgttatac
cagccccagcctcaacagccccagcctcagccatatggccagtgcataactgataacgga
gtggtgtactctgtgggtatgcagtggcttaagacacagggcagccagcaaatgctttgt
acctgcctgggcaatggagtcagctgccaggaaatagctgtgacccaaacatatggtggc
aattctgatggagaagcctgtgttctgcctttcacctacgatggaaggactttctattcc
tgcaccaccgaaggccgcacagatgggcatctctggtgcagcaccacttccaacttcgag
caggacaggagatactccttctgtactgagcagaacgttttggtccagacacgtggtggc
aattccaatggtgctctgtgccacttccccttcctgtacaacaaccgcaactacactgac
tgtacgtctgagggacggagagacaacatgaagtggtgtggaaccactgagaactatgac
gctgaccagaagtttggtttctgccctatggctgcccatgaagaaatctgcacaaccaac
gatggtgtcatgtaccgtgttggggaccagtgggataaacaacacgacatgggccatatg
atgagatgtacttgtgtaggaaatggccgcggagaatggacttgcattgcctattcacag
ctcagagaccagtgcatcgtggacggtatcacctatgatgtgaaccagaccttccacaag
cgtcatgatgaggggcatatgctgaactgcacatgctttggccagggccgggggagatgg
aaatgcgatcctgttgatcagtgccaggattcagaaacccgtaccttttaccaaattgga
gattcatgggagaagtacgtccacggtgtcagataccagtgctattgctatggtcgtggt
attggagaatggcattgccagcctctgcaggcgtatcctgggtcaactgggcctgttcag
gtgatcatcacagagagtacaaatcagccaaactcccaccccatccagtggaacgctcct
gaacgatctcacatcacgaagtacatcttgcgctggagaccgaaaaactctggaaggcag
tggaaggaagccaccatccccggctaccagaactcctacaccatctcaggcctgaagcct
ggtgtgatatatgaaggacagctcatcagtgttcagcggtatggccacaaagaagtcacc
cgctttgattttaccacaaccagcaccacaccagtgacaagcaacactgtttcaggagag
acaactcttcttcctcccgtggttgctacttcagagtcagtcactgaaatcacagccaac
agctttgttgtctcctgggtttctgcttctgacacagtttctggattccgtgttgagtat
gagctgagcgaggagggtgatgagccacagtatcttgatcttccaagcacagccacttct
gtcaacatccctgacttgcttcctggtcgcaagtatattgttaacgtctatcagatctct
gaagaaggagagcagaatctgatcctgtctacttcacagactacagctcctgatgcacct
cccgatcacaccgtggaaagtgtagatgacacatcaattgtcattagctggagcagacca
caggctccgatcacaggctacagaattatctacacaccctccgtggaaggcagcagcaca
gagctcaacctgcctgacactgcaacctctgtaacactcagtgacttgatgccgggtgtt
cagtacaacatcagcatctatgcagtggaagaaaatcaggagagtactcctatcttcatc
caacaggaaaccacgggcgtcccacacacagatgaagttccttcacccaaagatctgcag
tttgtggaggtttctgatatcaagatcaccatcatgtggaccccaccgcagagccaagtg
tccggctatcgagtggaagtgatccctgtcaatcgccctggccaacacggccagagactg
cctatcaccaggagctcttttgctgaagtcattgacctgctcccaggaacaacctatctc
tttaagatctttgcagtgagccacggcagggagagcaaacctttgactggagagcaaacc
accaaactcgatgcccccacccacctgagatttctcaataccacagagcattcagtgtta
gtgttgtggacacggccccgtgctgtgatcacaggataccggctgactgcaggtcccaca
agaggaggtcaaccaaggacctacaatgtaggaccttctgccaccaagtaccttctcagg
aacttgcagcctggcaccgagtacaccgtgtaccttgtggcagttaaagatgacttgcaa
agcaccagagagactggagtcttcacaacttatcagcctgtgggctctgttcctcctttt
aacacagaagtgactgagacttctattgtcatcacctggacacctgccccaaggattggt
ttcaagctgggtgtgcgcccaagccaaggtggagaggctccccgggaggtcatctctgat
tctggcagcatcgtgatatctggcctgacccctggagtggagtacacctacagcctcaca
gtcctgatggacggccaggagagagagactccgatcgtcaggagagtgactacaccgttg
tctccaccaaccaacctgcgcctggagcccaatcctgatactgggatcctggtagtctct
tgggatagaagcacaactccaggcatcagtgggtaccgagtgaccactgctcctaccaat
gggcagcagggttctaccttggaggaagtagtaggtgcggatcagaccacctgcaccttt
gaaaacctaaaccctggtgtggagtacaacgtcagcgtttactcagtcaaggatgaccag
gagagtatccccatctctgaaaccatcacacaagaggtgccccaactcactgacctaagc
tttgttgacataactgactcaagcatcggcctgaggtggaccccgttaaatgcctccacc
attattggttaccgcatcacagtagttgcagcaggagaaagtgtccctatttttgaagat
tttgtggactcctcagtaggatactacacagtgacaggcttggagccgggcattgattac
gacatcagtgtaatcacactcattaatggcggagagagcgcccctaccactctgacacag
caaacggctgtccctcctccgactgacctccgcttcactaatgtggggcctgatactatg
agagtgacttggaccgcaccaacttccatcgtgctgagcagtttcttggtgcgctactca
cctgtgaagaaggaggaagatgttgcagagctgacaatttcaccctcagacaacatggtg
atcttaacaaatctgctccctggtactgaatatctggtgagagtctacagtgtttctgag
caacatgagagtgcacctttgtctggaatccagaaaacaggtcttgattcccccactggc
cttgacttctcggatataactgctaactctttcaccgtccactggattgctcctcgtgcc
accattacgggctacaaaatccggcatcacccagagcatagtgctggcagacccaaagag
gaccgcgtgcccccctcgcggaattccatcacccttaccaacctgctcccagggactgag
tatgtggtcagcatcatcgctatcaatggcagggaggaaagcatgcccttggtcggccaa
caaacaacggtgtctgatgttccgagggacctggaagtcacccccaccagcccgaccagc
ctcgtgatttcctgggatgctcctgcagtgacagtcagatactaccggatcacttatggt
gaaacaggtggaagcagccctgtgcaggagttcacagtgcctggcaccatgtccactgct
accatcactggcctcaaacctggcgtagactacaccatcaccgtgtatgctgtaactggc
cgtggagacagccctgccagtagcaagccagtcactgtcacctacaaaacagaaatagac
acaccatcccagatgcaagttaccgacgtccaggacaacagtatcagcatcagatggctc
ccttcaacatccccagtcacagggtatcgggtgacagctgtccccaagaaaggacatggg
cccacaaaaactaaaaatgtccctgcagatcaaacgcaagtcactattgaaggtctgcag
cccacagttgagtatatggtcagtgtctacgctcagaatcagaacggagagagcctcccc
ttggttgagacagctgtcaccaacattgaccgccctaaaggactaacattcactgaggtg
gatgttgattccatcaaaattgcttgggaaagcccgcaggggcaagtcaccaggtacagg
gtgacctactcaagccctgaggatggaatccatgagctattgccggccccaggtggcgaa
gaagacactgctgagctgcatggcctcaggccaggttctgagtacactatcaatatcgtt
gccatatacgatgacatggagagcctgcccctcactgggacccagtccacagcaattcca
cctccaacaaacctgaagtttactcaggtaactcccaccagtcttaccgtcaactggaat
gcaccaaatgttcgcctcactggctacagagtcagagtgaaccccaaagaaaagactggt
cctatgaaagaaatcaacctttctccggacagtacatctgctgtcgtgtctggattaatg
gtagcaaccaagtacgaagtgagcgtgtatgccctgaaggactctctgaccagccgacca
gcccagggggtggtcaccactcttgaaaatgttagtccccctcgcagggcccgtgtgaca
gatgccaccgagacaaccatcaccattacctggagaaccaagactgagaccatcactggc
ttccaagttgatgccatcccagcaagtggccagagccccattcaaaggaccatcagccct
gatgtgaggacttacactatcactggcttgcaacctggcaatgactacaagatctacctt
tacactctgaacgagaatgcacgcagttccccagtagtgattgatgcctccactgctatc
gatgctccttctaacctgcgcttccttacaaccacaagcaactccctcctggttacctgg
cagcctccacgagctaagatcacaggctacatcatcagatatgagaaacctggctcacca
gccaaggaggttctgcctcgccctcggcccggcaccaccgaggctactattactggtttg
gaaccaggaactgaatacatcatctacatcattgctgtgaagaacaatcaaaagagtgaa
ccgctggttggcagaaaaaggacagatgagcttcccacgttgattaccagaccacacccc
aaccaacccgacattctcgacgtaccttccattgacgaggggaccccttacctcacaaac
aataggtatgacaatggaaacggtatccaacttccaggcacctctgggcacccgcagaca
ataggacaccagggtcaacaagtcttctttgaggaacatggctacagacggcctgtaccc
actacagcaactcctcttaggccggggtcaagacggcagccaccaaatgtagatgaagca
attgaaatccctgggtatcaagtgcctatcatagtcgaaccttcataccctcactcccgt
gggcccaggcgcaacgacaccacaggtcaagaagctctttctcaaacaaccatctcttgg
aggccgttgctggagagctctgaatacatcatctcctgtcagccagtcagccaggacgaa
gatactctgcagttcagggttcctggcacgtcctccagtgctacgctcactggtcttaca
agaggggccacctacaacatcatcgtggaagccctgaaagatcaccggagacaaaaggtg
ctggaggaggtggtcacagttggcaatactgtgtctgaaggactgaaccagccggctgac
gacacctgctttgatacttacactggctccttctattccattggcgaggaatgggagcgg
ttatctgaaactggctttaaactctggtgccagtgtttaggctttggcagtggtcatttc
agatgcgattcttctaagtggtgccacgataacggtgtaaactacaagatcggggagaag
tgggatcggcagggcgagaatggccagatgatgagctgcacctgccttggaaatggaaaa
ggagaattcaagtgtgaacctcatgagaccacatgctacgatgatgggaagatgtaccaa
gttggagagcagtggcagaaagagtactttggggccatctgctcctgcacttgttacgga
ggacagcagggctggcgttgtgacaactgccgcagacccagcgtggaggtggctcctgaa
ggctctgctggccatacctacacacagtttacacagagataccaccaggccacaaacacc
aacgtcaactgcccaattgagtgtttcatgcccctagatgtacaggcagacacacaacat
ccacggggaaagtaa
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integrated database retrieval system
