Gymnogyps californianus (California condor): 127019199
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Entry
127019199 CDS
T08687
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127019199
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gcl01009
]
127019199
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gcl04515
]
127019199
Protein phosphatases and associated proteins [BR:
gcl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127019199
Cell adhesion molecules [BR:
gcl04515
]
Cadherins
Protocadherins
127019199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
RCR
EphA2_TM
V_ATPase_I
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
127019199
NCBI-ProteinID:
XP_050757106
LinkDB
All DBs
Position
1:complement(40764056..41452619)
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AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWD
PIPIVPQKCSQNAGFKTQENEENHFESQRRVTFHLPDGSQESCSDSGLGDHEPVGGGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGS
SEGHFNTGNHVTDIPLANLKSYKQASGAVESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggccgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtgtccagt
aacaccggggaaatctttacgacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaacgagtgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaattattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaacggtgtgcagcactacgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgatcgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggttcat
ataccagaaaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagcgatggtagctctacgccagcc
cgggcaaccgttaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccgtcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaacggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcagtttacgacaaccaatatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggacgaaaatgacaacagtcccaaatttactcataatcacttccagtttttc
gtatcggagaacttaccaaagtatagcacggtgggggtgatcacagtgaccgatgcagat
gctggggaaaataaagcagtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccatactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctct
tacacctttgatgttaaggcagtggatggaggacaacctcctcgctcttctacagcgaaa
gtaaccataaacgtcatggatgttaacgataacagccccgttgtcatctacccaccttct
aatacttcttttaaactagtgccactctcagcaattccaggatcggtggtagccgaagtc
tttgctgtggatatagacactggcatgaatgctgagcttaagtacacaattgtaagcgga
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtatttttgtatgtaaatgacactgctggaaat
gcctcttatatttatgacttgatacgcagaactatggaaacacctttggaccggaacata
ggggacagtagccaaccctaccaaaatgaggactatctcacgatcatgatcgcgattgtg
gcaggtgccatggttgtcatagtggtgatatttgtcacggttctcgttcgctgtcgacat
gcatccagattcaaagccgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccgaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggaactcccgttggacaacacctttgttggtggttgcgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggtaaacgagcacttttactgggat
cccataccaattgtacctcaaaaatgcagtcaaaatgcaggattcaaaacacaggagaat
gaagaaaatcattttgaatcccagcgccgtgttacatttcacctccccgatggctcccag
gaaagctgcagtgacagtggtctgggagaccacgagccggtgggtggtggaaccctgatc
tcacaccctctccctctggttcagccgcaggacgaattctacgaccaggcttcaccggac
aagaggactgaagctgatggcaactccgaccccaactcggatgggcctcttgggccacga
ggattagctgaagctacagaaatgtgtactcaagaatgcctggttttgggtcactcagac
aactgttggatgcctcccagcttgggcccataccaacagccaaagtctcctctctccacc
tttgcacctcagaaagaatgggttaagaaggacaaactagttaatggacacacattgacc
aggacctggaaagaagatagcaacagaaaccagttcagtgaccgaaagcagtatggttcc
agtgagggccatttcaacactggcaaccacgtgactgacattcctctggccaacttgaag
tcttataaacaggcctcaggagctgttgagagtccaaaggagcaccagctataa
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