Gymnogyps californianus (California condor): 127019285
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Entry
127019285 CDS
T08687
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04136
Autophagy - other
gcl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127019285
04136 Autophagy - other
127019285
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gcl01002
]
127019285
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127019285
03029 Mitochondrial biogenesis [BR:
gcl03029
]
127019285
Peptidases and inhibitors [BR:
gcl01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
127019285
Membrane trafficking [BR:
gcl04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
127019285
Mitochondrial biogenesis [BR:
gcl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127019285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
127019285
NCBI-ProteinID:
XP_050757230
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All DBs
Position
8:33539385..33566312
Genome browser
AA seq
459 aa
AA seq
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MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTDGSGELST
DGSNFDKINTEISGNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL
AQGLMLHFLGRAWVWPDALDIDNSDSESWTAHTVKKLTASFEASLTAEREPKILSNHHQG
TLKRNCDDNEMRNEVYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKIAGDWYGPAVVAHI
LRKAVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSFMDSGKADTKAVIILVPVRLGGE
RTNMDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLESFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVK
GHSRDYDFASTLLREENDLFSEDEKKRLKRFSTEEFVLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacagggacagatgaagtagaaaagataaaatcaaagtttatgtctgcatgg
cacaacatgaaatacagttgggtgttgaaaacaaaaacttacttcagtagaaactccccg
gtctttctgctgggaaaatgttaccacttcaaaactgatggatctggtgaactctctaca
gacgggtccaattttgataaaatcaacacggagatttcaggaaatgttgaggagtttcgt
aaagattttatttctagaatatggctgacttacagagaggaatttcctcagataaagggg
tctgcattaacaacagactgtggttggggttgcacgctgagaactggtcaaatgctgctg
gctcaaggtcttatgcttcattttcttggtagagcctgggtctggccagatgcattggac
attgacaattcagattctgaatcatggacagcccatacagtgaaaaagctgacagcatca
ttcgaagcatcacttacagcagaaagagaacccaagatcctgtcaaatcatcatcaggga
acattaaagagaaactgtgatgacaatgaaatgagaaatgaagtttatcatagaaaaata
atttcttggtttggtgactctccgctggcagcttttggcttacatcagctaatagaatat
ggaaagaagtctggaaaaattgctggcgattggtatgggcctgcagttgttgcacacatt
ttaagaaaagctgttgaagaagcaagagaccctgagctacaaggagtaacagtctatgtt
gctcaggattgtacagtctacagttcagatgttatcgacagacagtgttcttttatggat
tctggaaaagcagacacaaaagctgtaattatattagttcctgtgagactcggtggagag
agaacaaacatggactacttagagtttgtaaagggaattttaagccttgagtattgtgtt
ggtattattggtggcaaacccaagcagtcatattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagtcattccactgtccttctcccaaaaagatgtctttcaaaaaaatggatccg
agctgcacaataggattttattgtagaactgtgcaggactttgagaaggcttctgaagaa
ataacaaagatgctgaaatcttcatctaaggagaaatatcccttgtttacttttgtaaag
ggtcattctagagactatgactttgcttccactctactccgtgaagaaaatgaccttttc
tctgaggatgaaaagaaaagattaaaaagatttagtacagaggagtttgtcttgctttaa
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