Gymnogyps californianus (California condor): 127019486
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Entry
127019486 CDS
T08687
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03013
Nucleocytoplasmic transport
gcl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127019486
09122 Translation
03013 Nucleocytoplasmic transport
127019486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127019486
03041 Spliceosome [BR:
gcl03041
]
127019486
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127019486
Spliceosome [BR:
gcl03041
]
Complex C
Other components
EJC/TREX
127019486
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127019486
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
127019486
NCBI-ProteinID:
XP_050757492
LinkDB
All DBs
Position
9:complement(18365669..18421788)
Genome browser
AA seq
1594 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKNEFVQLCRNLSENKSHDNMGFRDIQQALYELAYHVVRGNLKH
DQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAITEEHKREI
VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKSIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISALPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCL
LSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKA
QTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKY
LTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQY
VANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTK
KSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGF
LASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQ
HKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREV
NKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNW
LLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSD
IIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGN
KADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQA
LERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQN
GPGGAGMPTSLTINTVRLEEGTTEETDKLKEKSQGVVKVINKAVNATPKVTTSNGNSASN
SKIIKEKDDKEKSGKEKDKEKKDKTPAAIPEMKALGKDGKDKPKEERANKDDKAREIKEK
TPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSRERDVAKEMKSKENA
KGVEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHY
INHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKR
RKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKK
ESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctccctgccgagtggataaagaactgggagaaagggggcaagaacgag
tttgtgcaactatgtcgcaatctcagtgaaaacaaaagccatgataatatgggtttcaga
gatatccagcaggctttgtatgagcttgcataccatgttgtcagaggaaacttaaagcat
gatcaagcttctaatgttcttggtgatgtcatagaatttcgggaagacatgccttccatc
ctcgctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaagtaag
agggatcattttacccaactggtattagcctgtttgtatcttgtatctgacactgtccta
aaggagcgcttagatccagagacactggagtcattaggacttatcaagcagtctcaacag
ttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaat
ttgttaagagaggagaatgaaggttatgcaaagctcattgcagaactggggcaagactta
tctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttt
aaccttgatcctaacagagttttggatattatcctagaagtctatgagtgcaggcctgag
tatgacgacttctttgtaccactgatagagtcttatatgtacatgtgtgaacctcaaact
ctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagacacct
tcctccttatacagagttgctgctgtccttctgcaacataatctcatagatttggaagat
ctttacgttcatcttcttccaggggataatgccatcactgaggaacacaagcgagagata
gtggaagctaagcaaattgtcagaaaacttacaatggttgtcttatcctctgaaaagact
gaagaaaaggagaaggaaaaagaaaaagaggaggagaaaaccgaaaagcctcctgataat
caaaagcttggtttattggaagctttattaaaaattggtgattggcagcatgcacaaagt
attatggatcagatgcctccgttttacgccacttcacacaagtctattgcaattgccctt
tgccagcttgtacatgtgacaattgaacctctgtaccgcagagttggtgtacctaaagga
gctaaagggtcaccaatttctgctttgccaaacaagagagcaccaaaacaagcagacagc
ttcgaggacttgagaaaggaagtgttcaacatgctttgttaccttggtcctcatctctcc
catgatcccattttatttgcaaaagtggtgcgccttggaaaagcatttatgaaagagttt
cagtctgatggaagcaaacaagaagataaagagaaaatggagatactgtttagctgtttg
ttgagtattaccgatcaagtcttacttccatcactttctttgatggactgcaatgcatgc
atgtctgaagagttatggggaatgttcaaaacttttccataccagtaccggtaccgtctt
tatgggcaatggaagaacgaaacatacaatagtcacccacttctagtgaaagttaaagct
caaaccatagaccgagccaaatatatcatgaagcgtttaactaaggaaaatgtgaaacct
tctggaagacaaattgggaagctcagccacagcaatcctacgattttatttgattacatt
ttatcacaaatacaaaaatatgataacttaataactccggttgttgattcactgaaatac
ctcacttcgctgaactacgatgtcttggcatactgtatcattgaagctctggcaaaccct
gagaaggagagaatgaagcatgatgacactacaatctcgagctggctgcagagtttggct
agcttttgtggtgcagttttccgaaaatacccaattgaacttgctggtctacttcaatat
gtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaagaggtagtc
cagaaaatggcagggatagaaattacagaagaaatgacaatggaacaattggaagccatg
actggtggagaacaactaaaagctgagggtggatactttggccaaatcaggaatacaaaa
aaatcttctcagagattgaaagatgcattattggaccatgatcttgcccttccactgtgc
ctgcttatggctcaacagagaaacggtgtgatctttcaagagggaggggaaaaacatctg
aagctggtgggaaaactgtatgatcagtgccatgacaccctggtacaatttggtgggttt
ttagcatccaatctaagcacagaggattacattaagcgagtgccttctattgacgttctc
tgtaatgagtttcacacacctcacgatgctgcatttttcctctcaagacccatgtatgcg
caccatatttcatcaaagtatgatgaactaaaaaaagctgagaagggaaataaacagcag
cacaaagttcacaaatacattacatcgtgtgagctggtgatggctcctgttcatgatgct
gtaatttctctgcaccttcccaaagtttgggatgacatcagtcctcagttttatgctaca
ttctggtctttgacaatgtatgaccttgctgtcccacatagtagctatgacagagaagtc
aataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaa
aagaaaaaagaaaaagaacgttgcacagctcttcaggacaagctccttgaagaggagaag
aagcagttggagcatgtgcagagggttctacagagactgaaactagagaaggataactgg
cttctggcaaagtctaccaagaatgagactatcacaaaatttttgcagttatgtatattt
cctcgatgcattttttcggcaatcgatgcagtttattgcgctcactttgtagaactggtg
catcagcagaaaacacccaacttctccacacttctttgctatgacagagttttctctgat
attatatatacagttgcaagttgcactgaaaatgaagctagtagatatggcaggttttta
tgctgtatgctggagactgtgactagatggcacagtgacagagtcatatatgaaaaggaa
tgtggcaactatccaggcttcctaactatattacgggcaactggatttgatggtggaaat
aaagctgatcaattggattatgagaattttagacatgtggtacacaaatggcactataaa
ttaactaaggcttctgtgcactgccttgaaacaggtgaatacacacatatcagaaatatc
ctgattgtgctgacgaaaatccttccgtggtatccaaaagtgctgaacctgggccaagcc
ttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacctgatctatat
gcattggctatgggctattctgggcagttgaaaagtaggaagcctttcatgatacctgaa
aatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaacagtacaaaat
gggccaggtggtgctgggatgcctacatctctcacaataaatacagttagactggaagaa
ggcactactgaggagactgataaactaaaggagaagtctcagggtgtggtgaaagttatt
aataaagctgtcaatgctacaccgaaggtgacaacaagcaatggaaacagtgcttctaat
agcaaaattattaaagagaaagatgataaagaaaaaagtgggaaggaaaaagataaagaa
aaaaaagacaagactccagctgccattccagagatgaaggcacttgggaaggatgggaaa
gataaaccgaaggaagaacgggcaaacaaagatgataaagcaagagagatcaaggagaaa
acgccaaaatctgacaaggagaaggaaaaagtcaagaaagaagaaaaagcttcaaaagaa
gaaaaatccaagacagttgttaccatcattgagtcaaagtcaactgcagaaaaggagaga
gaaaaggagccgtccagagaaagagatgtagcgaaggaaatgaaatccaaggaaaatgct
aaaggagtagaaaaggtgccagtagctgggtccttgaagtcacctgttccccgatcagaa
acatcagaatctgaaagggaacaaaaacgccgcaaagttgatacacattcttctccgtca
cattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcagcaaagcactac
attaaccacactactccaacactgtccaagagtaaggagagagaagtggacaagaaagat
ttggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaaggacaggaaa
gatcgaaaaagggatcattcaaacagtgaccgagaggtaccacaggattcaactaaacga
cgcaaagaggaaaatgggacaactggttcttcaaaacatagtaaaagtgaaagtccttct
gattcccctcgcttaaatgaaaaggagaaggagaagaacaaatcaaaatcttcaggaaaa
gagaaaggtgattcgattaaagcagaaaagatggagaagagctcctctggtagcaaaaag
gaatcaagacatgataaagaaaaaacagaaaagaaagaaaaacgggacagcactggaggg
aaagaagaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
