Gymnogyps californianus (California condor): 127019681
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Entry
127019681 CDS
T08687
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127019681
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127019681
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
127019681
NCBI-ProteinID:
XP_050757806
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All DBs
Position
9:119494..127561
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AA seq
837 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRSSCSNTQWRE
KEVSTKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQ
IQAVLNKLGADALINDVLAELVRLGNKSESEGQSSASSTTSTLVPRGPCPKEIASPELSL
EDEVVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRK
EQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSND
NYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQ
PCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSS
KGEISSEVKRIAPKRQSDPSIRSVAVEPEEKLSVARKSEASSVPSLVSALSVPTLPPPKS
HAAGALNTRSASSPVPGSSQFMHQKSSLEHMSSVQYPPILVTNSHGTSVSYTDQYPKYES
LGDHGYYSLLSDFSNLSISSIRNTDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYN
DLYLGVADASPEDNVKIHRLPSQNRLQPFSHGYHEALNRVQSYGTEEPKQSLRKQSVSHL
GLHAQHPVVGARSSCPGEYSVPQHVHPSAAQPSRALVMTRMDSISDSRLYESNPTRQRRP
PLCREQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGIC
GEPREPHIIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggcactccagagaagac
agaaatgtggaacaagatgctggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgaacctgagcaaccatacttcagaagcagctgtagcaatactcagtggagagaa
aaggaggtttccactaaaccacatcggccgctctgtcggtccccttgtttggatcgccca
agtttttcacagagcagtatcacacaagacttgaagctagacgaatgcaaaacaaatttg
gacaaggaataccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcag
atccaggctgtactgaataaattgggagcagatgccctcatcaatgatgttctggcagag
cttgtgagacttggcaacaaaagtgaatcagagggacaaagcagtgccagcagtaccact
agtactctggtgccaagaggcccttgcccaaaggaaatagcaagccctgaattgtcactt
gaagatgaagttgtggataacagtgataacttgaggccaattgtcattgatggaagcaat
gtggctatgagccatgggaataaagaaggattttcctgtcggggaattcaactagctgtt
gactggttcctggaaaaaggacataaagatatcactgtgtttgtacctgcgtggagaaaa
gaacagtctcgacctgatgcaccaattacagatcaagaaatcttacgtaaattggagaaa
gaaaaaattcttgttttcaccccatctcgaagagttcagggtagaagagtagtttgctat
gacgatcgattcatagtaaaacttgctttcgactcagatggcatcattgtatcaaatgac
aactatcgggatcttcaaaatgaaaaaccagaatggaagaagttcatagaggagcggctg
ctaatgtattcttttgtgaatgacaaatttatgcctcctgatgatcctttaggacgccat
ggtccaagccttgaaaatttcttaaggaaaaggccagttattcctgaacataagaaacaa
ccgtgtccttatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaa
cgggcaaaccagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatct
gctgtgaaaactatgagtgagggagccttggccaaatgtggcacagggccatccagctcc
aaaggagaaatcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagc
attagatcagtagctgtggagcctgaggaaaagttatcagtagcccggaagtccgaggcc
agctctgtcccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagc
catgcagccggtgcattaaatactcgttccgcaagcagtccggtgccaggttcctcacag
ttcatgcatcagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatacta
gtcaccaatagccatggcacctcagttagctatactgaccagtatcccaaatatgagtca
ttgggggaccatggctattattccttactcagtgatttctccaacttgagcataagtagt
atccgtaacacagattattacggggctgatatggaccaggggatgtattctagaaactca
agcccctgtcctgacaattgcttaagccatacaagtaatgattcttattcctcttacaat
gacttgtatctgggtgtagcagatgccagtccagaagacaatgtgaagatccacagactg
ccatcgcaaaatcgtcttcagcctttttcccatggttaccatgaagccttaaatagagtt
cagagttacggaactgaagagcctaagcaatcccttcgcaaacagtcagtttcccactta
ggcctacatgcccagcatccagttgttggagcacggtccagttgtccaggagaatactct
gtgcctcaacatgttcatccatcagctgcacaaccaagccgtgccttggtcatgacaaga
atggacagtatttctgactcacggctttatgaaagtaaccctacaaggcagagaagacca
cctctctgtcgagagcagcatgctagttgggatccattaccatgtgcgtcagactcttac
acttaccactcgtatccactgagtaacaacctcatgcagccatgttacgaacccgtaatg
gtaagaagcatgcctgagaagatggagcaactctggaggaatccctggattgggatatgc
ggtgagccacgggaacctcatatcatcccagaacatcagtatcaaacatacaagaacctc
tgcaatattttccctccaagcattgtcctctctgtgatggaaaagaatccccacatgaca
gatgcacaacagctggcagctatgattgttgccaaattaagaacagggcgttaa
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