Gymnogyps californianus (California condor): 127019711
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Entry
127019711 CDS
T08687
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127019711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127019711
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127019711
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
127019711
NCBI-ProteinID:
XP_050757845
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Position
9:complement(22624123..22652467)
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AA seq
562 aa
AA seq
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MATELEPPAAGAVPGAAPLEAEEDEEHWLYGDDTTGKQEDGPISGHAESSHPLQDAPQEN
RPVSNEDREMSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVG
GRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQ
PQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGTSSSSSSHWEYSGSRRERERERERERERERDRDRTPTTSEYNNDDERYRYYSRERSY
DFERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKR
SKEEKEASEDGAQEGEEQDAKE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgccggcggctggcgccgtgccgggcgcggcgccgctggag
gcggaggaggacgaggagcactggctctacggggatgacaccactggtaagcaagaagat
ggaccaatttctggacatgcagaatcttctcatcctttgcaagatgctcctcaggagaac
cggcctgtcagcaatgaagaccgagagatgtcgcaacatgcacttccaagtggcgaagat
gatgaagatgacagcgatagcgacagtgatgatgatgacgtgaaagttactattggcaat
attaaaacgggagcaccatcgtacatgggaactcctatgaatctaaacttaaaaacgggt
agaggctatggagcatctgcttcagccaagttgcagcccaaaggtattgacttagatgcc
gcagggaatataaatggattgcctgttatagaagtggatttagattcatttgaagacaaa
ccgtggaggaaaccaggtgctgatctttctgattactttaattacggattcaatgaagaa
acatggaaagcttattgtgaaaagcagcgacggcttcagcttggactggatcctgctcct
cccatcagcactgaaaataagatcacggttcagcaaggaagaacaggaaatgctgaaaaa
gaagtggaaaacaacatcatcaaaacagaattcaaaacagacttcttggctctggtggga
ggacgcatgaaggctgggcctcctccgaataggaagctgggtgggacaattgatgtgatc
ggtggccaggcaggcacaattaggagagtagaaggaagacgtcgtgataagcatgcctct
gaggaaaacccaattcaggtccttggagaccacggaagtaagccacaacccccacagcag
ccccagcagccatcacagccccaacagccacctcagcaacagccgtttgcaccaccagca
ggcccaccgcctcccccgctcgctgggccgcctccaccacacttcctccaccctcctcca
ccagttacttctgttccacctcccctgcatcctccaggtctgccaccacccggtcctatt
ccagggttgttcccgccgcctctggcaccaccaccagctctcctcattccaaccttggat
ggccagccagccagctacaataacaggcagcctcctccatttggctacaactctgcagat
tcaggtttcatcagctacccgcccatctccacgtcccacacgccctgggtgacgacggtg
gacaaaggcacaagcagctccagcagcagccattgggagtactcaggctcgaggcgcgag
agggagagggagcgtgagcgggaaagggaaagggagagagacagagaccgcactccgacc
actagtgaatacaacaatgatgatgaacgataccgctactacagccgagagcgcagctac
gactttgagcgtgactaccgccggagtcgagatcgcagcagggagcgagaggatcgtcac
cgagagcgcaggcacagagacaaagaggagagcagcaagcataagtcttcaagacgcaag
caacacgagagcgaggagggggagagtcatcggcgtcacaagcacaaaaagaacaagcgg
agcaaagaggagaaggaggccagtgaagacggtgcccaggagggagaggagcaggacgcc
aaggagtaa
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