KEGG   Gymnogyps californianus (California condor): 127019909
Entry
127019909         CDS       T08687                                 
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
gcl  Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:gcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gcl04121]
    127019909
   03400 DNA repair and recombination proteins [BR:gcl03400]
    127019909
Enzymes [BR:gcl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127019909
Ubiquitin system [BR:gcl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127019909
DNA repair and recombination proteins [BR:gcl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    127019909
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 ResIII zf-RING_2 zf-ANAPC11 zf-C3HC4_4 RING_XB3-XBAT31 zf-rbx1 HDA2-3 zf-Nse Prok-RING_4
Other DBs
NCBI-GeneID: 127019909
NCBI-ProteinID: XP_050758164
LinkDB
Position
10:30091869..30118315
AA seq 983 aa
MSWRLPKDSARGCSQYNICRGERNYSRFSSSDLYSGLGLEDFLSVGVTSATEEDTDSAIL
YGTLRGSVVGLRYYTGIVNNNEMVALQREPNNPYDKNAVKVNNVNGEQVGHIKKELAAAL
AGIMDNKLALVEGVVPYGAKNAFTMPVQMSFWGREENKEAVLDQLKRHGFKLAPPLKESG
FGSKWMSGRAGPSYSAPLHAAVQLTTEQLKSEFDKLFEDLKEDDKTCEMEGAEAVGTLLL
PHQKQALAWMVSRENSNDLPPFWEERSNFYYNVLTNFAEKKRPKNVLGGILADDMGLGKT
LTTIALILTNCQDGKPLPVEKITSNKFYEESGTNSMNNVGRRLCKDSSNVMEPGVSNVKK
FETTPLKYSSCLPKRDKAKKPRYSGSSDLGESEEQLLQQTETTSCVIQEDTGFGSVLLAS
STCLKRQTKRKGTASVQSVEKKYSDDGPRATLIVCPLSVLSNWIDQFEQHIHQDFHVNIY
VYYGSDRSKDPSVLSEQDIVLTTYNILATDYGNGGDSPLHKVKWLRIVLDEGHTIRNPNA
QQTKAALNLEGHRRWVLTGTPIQNSVKDLWSLISFLKLKPFTDREWWHRTIQRPVTMGAP
GGLGRLQSLIRSITLRRTKTSKVKGKPILELPERKVLIQPVTLTEEERQIYQSVKKEGRD
AISRFFSEGTVLAHYADILGVLLRLRQLCCHPHLCTNTSSSSFSADSKTPEELHETLVNK
MKLVLSSGSDEECAVCLESLTLPVITRCAHVYCKPCIFEVIRREQPNAKCPLCRSELRVE
HLVECPLEEETDSSNGKKSDQKWIPSSKINALMHALIELRRDNPTAKCLVVSQFTTFLSL
IENPLKESGFAFTRLDGSMAQKKRVEAIQCFQSSQAGSPTVMLLSLKAGGVGLNLTAASR
VFLMDPAWNPAAEDQCFDRCHRLGQKHNVVITKFIVKDSVEENMLKIQNKKRELAAGAFA
TKKPSASEVKQTKINEIKALIDL
NT seq 2952 nt   +upstreamnt  +downstreamnt
atgtcgtggaggctgcccaaagattctgcaagaggatgctctcaatataacatctgcaga
ggagagagaaactattcccgtttttcctcttctgacttgtactccggtcttgggttggaa
gacttcctctctgtaggtgtcacttctgcaacagaggaggatacagactcagctatttta
tatggaactttgagaggaagtgttgttggattacgatactacacagggattgttaataac
aatgaaatggttgcacttcagagggagcccaataatccttatgataaaaatgcagtgaaa
gtaaataatgtgaatggagagcaggtaggccatataaaaaaagaactagcggcagcattg
gcaggcattatggacaacaaactagcattagttgaaggggttgtcccttatggagcgaaa
aatgcctttaccatgcctgtacaaatgagcttttggggaagagaagaaaacaaggaagcc
gtgctagatcagctaaaaaggcacggatttaaattggctcctcctctgaaagaaagtggt
tttggatcaaagtggatgtctgggagagctggtccaagttacagcgctccgcttcatgct
gctgtgcagttgacaactgaacagcttaaaagtgaatttgacaaattgtttgaggatctg
aaggaagatgataaaacttgtgaaatggaaggagcagaggctgttggtacactcttgctt
ccccatcagaagcaggctttagcttggatggtttcacgtgagaacagtaacgatttgcca
ccattttgggaagagagaagtaacttctattacaatgtacttacaaattttgcagaaaag
aagcgacctaaaaatgttcttggaggaatactggctgatgatatgggactgggtaaaacg
cttactactattgcattgattctcacaaattgtcaagatggcaagcctcttcctgttgaa
aagatcacaagtaataagttttatgaggaatctggtactaacagcatgaacaacgttgga
cgcagactatgtaaagactctagcaatgtgatggagcctggtgtttctaacgtaaaaaag
tttgaaactactccgttgaaatactcaagttgtcttccaaaaagagataaagccaagaaa
cccagatattcaggaagcagtgacttgggagagtctgaagaacagctactgcaacaaaca
gaaacaacttcctgtgttatccaagaagatacaggctttggatctgttcttctagcttca
tctacttgtttaaaaagacaaacaaagagaaaaggtaccgctagcgttcagtcagttgag
aagaaatattctgatgatggccccagagcaacactgattgtatgtccactgtctgtccta
agcaattggattgaccaatttgaacaacatatccaccaagattttcatgtaaatatttat
gtttattatggttctgaccgtagcaaagacccatccgttctttcagaacaagacattgta
ctgacaacatacaacatcttagctactgattatggaaacggaggtgacagccctttacac
aaagtcaagtggctgagaattgtattggatgaggggcacactatacgaaatccaaatgct
cagcaaactaaagctgccttaaatctggagggacacagaagatgggtacttacaggcact
cctattcagaattctgtgaaggatttgtggtcacttatttccttcttaaaactgaaacct
tttactgatcgagagtggtggcacagaacaattcaacgtccggtcacaatgggagctcca
ggaggacttgggcgtttacagtctctgattaggagtattacccttagaagaactaaaaca
agtaaagttaaaggaaaacccattttggagttaccagaacgtaaagtacttattcagcct
gttacgcttacagaggaagagaggcaaatctatcagtctgtgaagaaggagggcagagat
gctattagcagatttttcagtgaagggactgtactagctcactatgctgacatccttggt
gtcctgctcagattgaggcagctttgttgtcatcctcatctttgtacaaatacatcttct
tctagtttttcagctgatagtaaaactcctgaagaactgcatgagacattagtgaataaa
atgaaattggttctgagctctggttcagatgaagaatgtgcagtttgcttggaatcactg
actcttcctgtgataacacgctgtgcgcatgtgtattgtaagccatgtatttttgaagtc
atcagacgtgaacagccaaatgccaaatgccctctctgtaggagtgagcttcgagtagag
cacttggtggaatgtcccctagaagaggaaacagactccagtaatggaaagaaatctgat
cagaagtggatacccagttcaaagataaatgctctcatgcatgctttgatagaactacgg
agggataatccaactgctaaatgtctggttgtttctcagttcacaactttcctgtcactg
atagaaaatcccttgaaggaatcagggtttgcctttactcgtttggatgggtcaatggca
cagaagaaaagagtagaagcaattcagtgtttccaaagcagccaagcaggatccccaact
gtaatgcttttgtctctgaaagcgggtggagttggattaaatctgacagcggcttcccga
gtgtttttaatggatcctgcttggaatcccgctgcagaagaccagtgttttgacaggtgt
cacaggctgggtcagaagcataatgttgttattactaagttcattgtgaaggattcagtg
gaagaaaatatgctgaaaattcagaacaagaagagggaacttgcagcaggagcctttgcc
accaaaaagccttcagcaagtgaagtaaaacaaaccaaaattaatgaaattaaggctcta
attgatttatag

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