Gymnogyps californianus (California condor): 127020002
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Entry
127020002 CDS
T08687
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127020002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127020002
03012 Translation factors [BR:
gcl03012
]
127020002
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127020002
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127020002
Translation factors [BR:
gcl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127020002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Sir1
Motif
Other DBs
NCBI-GeneID:
127020002
NCBI-ProteinID:
XP_050758357
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All DBs
Position
10:28749121..28770969
Genome browser
AA seq
980 aa
AA seq
DB search
MSYEHRRDWGRGGDGGSSSGSSSAGGHGGRGGGRGRHPSHLKGREIGLWYARKQGQKSKE
TDRQQRAVVRMDERREEQIVQLLNTVQTKNEKEQEAMSWWSGDEEGPTPEQPAKVKPEAE
KAPVRQRPVLEKTSLDRDVEYLFEKNEQDTDLDEQLKEDLRKKKSDPRYIEMQRFREKLP
SYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRIS
AISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSI
SHVVLDEIHERNLQSDVLMSIIKDLLNIRLDLKVILMSATLNAEKFSEYFDNCPMIHIPG
FTFPVVEYLLEDVIEKLRYTPENTDRRPRWKKGFMQGHVSRPEKEEKEEIYREQWPDYLR
QLRGRYSASTIDALEMMDDDKVDLDLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLL
MSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVID
GGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRARLLDDYQL
PEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTP
LGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKEL
SKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAA
GFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVN
IHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTI
AVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENPHPVDWNDTKSRDTAVLTAIIDLIT
TQENESARNYAPRFQSERYS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccgccgggactggggccgcggtggcgatggcgggtcttcctccggc
tcctcctccgcggggggacacgggggccgcggcgggggccgggggcgccaccccagccac
ctcaagggccgcgagatcgggctgtggtacgcgcggaagcagggccagaagagcaaggag
acggaccggcagcagagagctgttgtgcgtatggatgaacgcagggaggagcagattgtg
cagctgttgaatactgtccaaactaaaaatgaaaaggagcaagaagccatgtcctggtgg
tctggggatgaagaaggacctactccagaacagcctgcaaaagtgaaaccagaggctgaa
aaagctcctgtaagacagagaccagtcttggaaaaaacatctctcgatcgggatgtggaa
tatctctttgaaaaaaatgagcaggatacagatttagatgagcaacttaaagaagactta
agaaagaagaaatctgatcctagatatattgaaatgcagagattccgagagaagctcccc
tcatatgggatgagacaggaacttgtaaaccttataaacaataatcgagtaactgtgata
agtggtgaaactggttgtggaaagacaacccaagttacacagttcatcttggacgattac
atagagcgagggaaagggtctacatgcaggatcgtttgtactcagcctaggaggatcagt
gctatctcggtggctgagagagttgctgctgaaagggcagaagcatgcggtaatggcaag
agtacaggatatcaaattcgtctacagagtcggttaccaaggaaacaaggttcaatttta
tactgtaccacaggaattgtcctacagtggctccagtcagataagcacttgtccagcatt
agtcatgtagtccttgatgaaattcatgaaagaaatcttcagtcagatgttttaatgagc
attattaaagatcttttgaatattcgtttggatttgaaagtaatactaatgagcgctact
ttaaatgcagagaagttttcggagtattttgataattgtccaatgattcacatacctggg
ttcactttccctgtggtggaatatcttctcgaggatgtaattgagaagttgaggtatact
ccagaaaacacagaccgtcggccacggtggaagaaaggcttcatgcaaggacatgtaagc
agaccagaaaaagaagagaaagaggaaatctacagggaacaatggccagactacttaagg
cagctgcggggcaggtattcagcaagtactatagatgccttggaaatgatggatgatgac
aaggtcgaccttgaccttatagcagcacttatcagatacatcgttttggaagaagaggat
ggtgcaattctagtgtttcttccaggctgggacaacattagcactttgcatgatctcttg
atgtcacaagtcatgtttaagtcagataggtttattatcatacctttacattcattgatg
cctactgttaaccagactcaggtttttaagaagaccccgccaggagtaaggaaaatcgtg
attgctaccaacattgcagagactagcattacaatagatgacgtcgtgttcgttatagat
ggtggaaaaataaaggaaactcactttgacacacagaacaacattagcacaatggcagca
gagtgggttagtaaagctaatgccaagcagaggaaaggtcgagcaggaagagttcagcca
ggccactgttatcatctatacaatggactacgtgctaggcttctagatgattatcagtta
ccagagatcttgaggacacctttggaagaactctgtttacaaatcaagattctaaagctt
ggtggaattgcttattttctgagcaaactaatggatccaccatctcgtgatgctgtaatg
ttggccataaatcatctaatggagctgaatgctttggacagacaagaagaactgactcca
ctaggtgtccatttagcacgattaccagttgaaccacatattggaaaaatgatcctcttc
ggagctttattctgctgcttggatccagtacttacaattgcagctagcctcagcttcaaa
gacccttttgtcattcctctgggcaaagagaaagtagctgatgcaagaagaaaggaactg
tcaaagaacacgaaaagcgatcatctaactgtggtgaatgctttcacgggctgggaagag
actcggcgtcgtggtttcagaactgagaaagactattgctgggaatatttcctgtcttca
aatacactccagatgctgcataacatgaaagggcagtttgctgagcatctccttgcagct
ggatttgtgaatagcagagaccccaaggatcccaaatccaataccaactcagataatgag
aagttgctcaaagcggtcatctgtgctggcttatatccaaaagttgcaaagatccggcca
agcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagacagatggaacagttaat
attcatccgaaatcggttaatgtggaagaaacagagttccattataactggcttgtgtac
catttgaagatgagaactagcagtatctacttgtatgattgtacagaggtctctccatac
tgtctcttgttcttcggaggagatatatccattcagaaggataaagatcaggataccatc
gctgtggatgaatggattgttttccagtctccggcaagaatagcacacttagttaagaat
ttaagacaagagctcgatgatcttctacaagaaaaaatagaaaacccacatcccgtggac
tggaatgatactaaatccagggatacagcagtactgacagctattatagacttaatcaca
acacaggagaatgaaagtgccagaaactatgctccacgattccagagtgaacgctatagt
tga
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integrated database retrieval system
