Gymnogyps californianus (California condor): 127020115
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Entry
127020115 CDS
T08687
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127020115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127020115
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127020115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Collagen
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
127020115
NCBI-ProteinID:
XP_050758527
LinkDB
All DBs
Position
10:complement(3316460..3387893)
Genome browser
AA seq
1324 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKT
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGAAGPQGFMGPQGP
PGPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLG
PQGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGL
NPRGMQGPPGPRDNQGPTPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTML
GPPQELRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLL
GDGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDSRGPPNHHMGPLSD
RRHDQNSGGPDHGPERGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHP
DKRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSD
DRYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDTFDSPDENSRG
RDHGVRGRGRGALRGGRKGLLPTPDELPRFEGGRKPESWDGNREPGPRPDHPSHEGHSPA
NRERSSSLQGMDMASLPPRKRPWHDGPGTSDHREMDAPGGPPEERGKGRGNSGPSQRAPK
SGRSSSLDGDHHDGFHRDEAFGGGPAGGSNPSRGGRSGSNWGRGNNMNSGQSRRGASRGG
GRGR
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattggctccccgccccgatttttccatatgccgaggttccagcaccag
gcgcctcggcagttgttctacaaaagacctgattttgcacagcagcaagcaatgcaacag
cttacttttgatggaaagcggatgagaaaagctgtgaaccgaaagactatagactacaat
ccctctgtaattaaatatttggagaatagagtatggcagagagaccagcgagatatgcga
gcaatccagcctgatgcaggatattataatgacttggtccctcctataggaatgctgaac
aaccctatgaatgctgtaacaacaaaatttgttcggacatctactaataaagtaaaatgc
ccagtgttcgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggagagttcactttatggaatggactgactttcaattttgaaacgatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttcttcgttgccatgaggagagaattctt
cgaggacatggagcagacgtgaaatgtgttgactggcatccaacaaagggattagttgta
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacactgcatgctcataaaaacacagtgatggaggtgaaactgaatctgaatggc
aactggctgctaacagcttctcgtgaccacctctgtaagctctttgacattcgtaatctg
aaagaagaacttcaggtcttcaggggtcataagaaggaggccacagctgtggcctggcat
cctgttcatgaaggactgtttgccagtggaggatctgatggctctttgttgttctggcac
gttggggttgagaaggaggttggtggaatggaaatggcccatgagggaatgatctggagt
ctggcctggcatccccttggacacattctctgttcaggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgcgagatcgttacaacttgaatctgctg
cctgggatgtcagaggatggtgtggaatatgctccaggagatgatctggaacccaacagc
ctagcagttattcctgggatgggaatacctgaacaattgaaaatagccatggagcaagag
cagatggggaaggatgagtccaatgatattgaaatgacaatcccaggactggattgggga
atggaggaagtaatgcaaaaggaccaaaagaaggtgccacagaaaaaagtgccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcagaataaagttcctttgcctccc
ccacctgagccattgaatgatagaaaggaggatattaagctggaggagaaaaagaagaca
caggcggagattgaacaggaaatggcagcacttcagtacacaaacccacaactcttggag
caactgaagattgagagacttgcacaaaaacaagctgagcaagtgcagccgccacctcca
ggaggctctcttcatggaccccagccttttccagggcaaggcccgatgtcacagatgcct
caaggatttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggtccacaaggacagttcagacctccaggaccccaaggacaaatgggacctcaa
ggtcctccattacatcaaggagctgcaggtccacaagggttcatgggaccacaaggacct
ccaggcccccaagggcctccacaaggaatgccacggcctcaggatttacatggacatcaa
ggaatgcagagacatcctggccctcatgggccaatggggcctccaggtccacagggtaat
gcaggcccacaaggccacttaggaccacagggtctacctgggtctcagactcatttagga
ccgcagggtccgcctggcccacaaggtcacttgggtcctcaaggtccccctggtggtcaa
ggaatgcaagggccacctggtccccgaggaatgcaaggacctcttcctcatggcatgcaa
ggagctccaggatctcaagggatgcagggccctatatctcaagggcctttgatgggactt
aatccaagagggatgcagggtccaccaggacccagagataaccagggacctactccacaa
gggatgatgatgggtcatccgcaagaaatgagaggtcctcatatgcaaagtggtttacta
ggacatggtccccaggagatgaggggcctccagggacccccgcctcaaggtacaatgtta
ggaccgccacaagaattgcgtgggccaccaggtccacaaggccagcagggacctccacaa
ggctctttagtagggcctcaaggaaacatgcaaggacctcagggacaaccgaacccttca
agggggccgcacccttcccagggccctctgcctttccagcagcagaaaacgcctctgttg
ggtgatgggcctcgtcccccatttaatcaggacggacagaacccaggtcctccaccactg
ataccaggactggggcagcagggaggacaaggtcgtcttggccctcacaaccaaggacct
ggtcttaataaaggtgactcccgtggtccaccaaaccatcacatgggccctctctcagat
agaaggcacgaccagaacagtggtggtcctgatcatgggcctgagagagggttgtttcga
ggtggccaggagtggggtgatggtagagacagcaggggcatgccagatagacgaggacct
cacccagatttccatgatgactttgatcgaccagatgacttccgtgacgacttccatcca
gataagagatttggccatcgattacgggaatttgaggggagaggaggcccaccattgcaa
gatgaaaaatggagacgaggtggacctgggcctccctttcctcctgatcacagggaattt
gaaggagggggttcaaaccgtgggcctcctggtgcttgggaaggacggagaccttcagat
gatagatatccacgggatcctgaggatgcacggttccgaggaagacgagatgagagcttc
agaagaggaggaccctcaagacatgagggccggggacccagggggagagatggctttcct
ggccctgaagattttgggccagatgacacttttgactctccagatgaaaactcaagagga
agggaccatggtgttcgggggcgaggtcgtggtgctcttagaggaggccggaagggttta
cttcctactccagatgaacttccacgctttgaaggagggcggaaaccagaatcctgggat
ggaaacagagaaccaggtcctcgtccagatcacccttctcatgagggacattctccagct
aacagagaacgttcttcttcgctccagggcatggacatggcctcgttgccaccacgtaaa
cgtccctggcatgatggaccagggacctctgaccacagagaaatggatgctccaggtgga
cctccagaggaaaggggcaaaggacgaggaaattcaggaccttcacagagagcaccaaaa
tctgggaggtctagttctttagatggagaccatcacgatggattccacagggatgaagct
tttggtggaggccctgcaggaggcagtaacccttctcgaggaggaaggagtggaagtaat
tggggaagaggaaataacatgaactctggtcagtcaagaagaggagcatctaggggtggt
ggaagaggccgatag
DBGET
integrated database retrieval system
