KEGG T08687: 127020170

Gymnogyps californianus (California condor): 127020170

Entry

127020170         CDS       T08687

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB4

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

gcl Gymnogyps californianus (California condor)

Pathway

gcl03020

RNA polymerase

gcl03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:gcl00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127020170
  09124 Replication and repair
   03420 Nucleotide excision repair
    127020170
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gcl03021]
    127020170
   03400 DNA repair and recombination proteins [BR:gcl03400]
    127020170
Transcription machinery [BR:gcl03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     127020170
DNA repair and recombination proteins [BR:gcl03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127020170

SSDB

Motif

Pfam:

RNA_pol_Rpb4 Maelstrom Tfb4

Other DBs

NCBI-GeneID:

127020170

NCBI-ProteinID:

XP_050758592

LinkDB

Position

10:complement(3389986..3393610)

AA seq 142 aa
MAAGGSDLRAADVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY

NT seq 429 nt +upstreamnt +downstreamnt
atggcggcgggcgggagcgacctgcgggcggcggacgtggaggaggacgcctcgcagctc
gtcttccccaaagaatttgaaactgcggaaactcttctaaattcagaagtacatatgctt
cttgagcatcgtaagcaacagaatgagagtgcagaagatgagcaggagctttcggaagtc
ttcatgaaaaccttgaactacacagcgcgtttcagccgcttcaaaaaccgtgaaaccatt
gccagtgtccgtagtttgctgctccagaaaaagctccataaatttgaattggcatgtttg
gctaacttgtgtcctgagacagctgaggaagcgaaagctttgattcctagcctggagggc
cgatttgaagatgaggaattacagcagattcttgatgacattcagactaaacgcagcttc
cagtattaa

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