Gymnogyps californianus (California condor): 127020239
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Entry
127020239 CDS
T08687
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl00280
Valine, leucine and isoleucine degradation
gcl01100
Metabolic pathways
Module
gcl_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
127020239
Enzymes [BR:
gcl01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
127020239
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
RimK
Biotin_lipoyl_2
ATP-grasp_3
ATPgrasp_ST
GARS_A
NQRA_N
PHL
RnfC_N
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
127020239
NCBI-ProteinID:
XP_050758689
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All DBs
Position
10:19604514..19626643
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AA seq
658 aa
AA seq
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MRTAKKMGVKSVAVYSEADRNSMHVAMADEAYCIGPAPSQQSYLAMEKIMQVAKVSAAQA
IHPGYGFLSENTEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKAIMSAAGVPVVEGYHGE
DQSDECLKEHAKRIGYPVMIKAVRGGGGKGMRIARSEKEFLDQLESARREAKKSFNDDAM
LIEKFVDNPRHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISPEVRKRLGE
AAVKAAKAVNYVGAGTVEFIMDSQHNFYFMEMNTRLQVEHPVTEMITGTDLVEWQLRVAA
GEKIPLTQEEILLQGHAFEARIYAEDPNNDFMPGAGPLLHLSTPPPDSFTRIETGVRQGD
EVSVHYDPMIAKLVVWAEDRQAALRKLRYSLRQYNIVGLSTNIDFLLSLSGHPQFEAGNV
HTNFIPQHHDELFPTKKATPHEVMCQAALGLILKEKMLTDAFRDQSDDKFSPFASSTGRR
INICYTRNLSLLDGENIVDVAVSYNQEGSYNMQIQDKTFLISGEIFNEGDSVYLRSSVNG
TVCKSKLVILDNTIYLFFPEGSAQIGLPVPKYLSAMSSAGMQSGAVAPMTGTVEKVFVKA
GDKVQIGDPLMVMIAMKMEHTIRAPKAGVIKKVNFQEGAQANRHAPLVEFMDEEAESK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacagcaaagaaaatgggtgtgaagtctgtagcagtctatagtgaagcagacaga
aattccatgcatgtagcaatggcagatgaagcgtattgcattggtccagcaccctcacag
cagagttacttggccatggagaaaataatgcaggtggccaaggtctcagcagcacaggct
attcatccaggttatggtttcctctcagaaaacacagagtttgcagagttgtgcaagcaa
gagggaatcatcttcataggtcctccttcatctgctatcagagatatgggtattaagagc
acttccaaagctataatgtctgctgctggcgttcctgttgttgaaggttatcatggagaa
gatcaatcagatgagtgtctaaaggaacatgccaagagaataggatatccagtaatgatt
aaagctgttcgcggaggtggaggaaagggcatgagaattgctcgctcagaaaaggagttt
ctggaccaactagaatcagctaggagagaagcaaagaagtctttcaatgatgatgcaatg
ctgattgagaaatttgtagataatccaaggcatgttgaagtccaagtatttggtgaccag
catggaaatgcagtgtatttgtttgaaagagactgcagtgtgcaaaggagacatcagaag
atcattgaagaggcaccagggccaggaattagtcctgaagttcgaaagagacttggagaa
gctgctgtcaaagcagctaaagcagtgaattatgtgggagcaggaacagtggaatttatt
atggactcccaacataatttttacttcatggagatgaataccagactgcaagtagagcac
ccagttacagagatgatcactggaacagacttggtggaatggcagcttagggttgcagcg
ggagagaagattcccctaacgcaggaagagattctgctccagggccatgcatttgaagct
agaatatatgctgaagatcctaataatgactttatgccaggggctgggccattgttgcac
ttatccaccccaccacctgatagtttcaccaggatagaaactggagtcagacaaggtgat
gaggtttctgttcattatgatccaatgattgcaaagctagttgtatgggctgaggatcgt
caagcagcactgagaaagttgcgatacagtttgcgtcaatataatattgtaggattaagc
actaatattgatttcttactgagcctgtcaggacacccacagtttgaggctggaaatgtg
cacactaatttcattcctcaacaccatgatgaactatttccaaccaaaaaggcaactcca
catgaagttatgtgtcaggcagctctaggactcatactgaaagaaaaaatgctaacagat
gcttttagagatcagtcagatgataaattttcaccatttgcatccagcactggtagaaga
ataaatatatgttatactagaaacctgtctctgctggatggggaaaacattgtggatgta
gctgtaagttacaatcaagaagggtcatacaacatgcagattcaagacaaaacgttcctg
atttctggagagatcttcaatgaaggtgattcagtttacttgaggtcttcagtaaatgga
acagtgtgtaagtccaaattggtcattttggacaacaccatttatctcttctttccggaa
ggcagtgctcagattggccttcctgtacccaagtacttatctgcaatgagttcagcggga
atgcaaagtggtgctgtagcgcccatgacaggcacagttgaaaaggtgtttgtgaaagca
ggggataaagttcagattggagaccctctaatggttatgatagctatgaaaatggagcat
accataagggctccaaaggcaggagtgataaaaaaggttaatttccaagaaggggcccag
gccaatagacacgctccgctagttgaattcatggatgaagaggccgagtcaaaataa
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