Gymnogyps californianus (California condor): 127020382
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Entry
127020382 CDS
T08687
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04136
Autophagy - other
gcl04140
Autophagy - animal
gcl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127020382
04136 Autophagy - other
127020382
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127020382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127020382
03029 Mitochondrial biogenesis [BR:
gcl03029
]
127020382
Membrane trafficking [BR:
gcl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
127020382
Others
Specific organelles associated proteins
Auto phagosome
127020382
Mitochondrial biogenesis [BR:
gcl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127020382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
eIF2A
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_ACSF4
Beta-prop_NWD2_C
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR41
Tricorn_2nd
INO80F
ZapB
FKBP15
Fez1
Beta-prop_Vps41
CC_Bre1
DUF8181
HTH_6
Lipoprotein_6
Tricorn_N
CCDC93_CC
HEF_HK
YicC-like_N
V_ATPase_I
FUSC
WHD_CYT4
Motif
Other DBs
NCBI-GeneID:
127020382
NCBI-ProteinID:
XP_050758858
LinkDB
All DBs
Position
10:3057067..3079596
Genome browser
AA seq
623 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAAELRRRDRLQRQAFEEIIGQYNKLLEKSDLHAVLADKLQAEK
YDMQSRHEISPGHDSTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDI
EVLADETSDTAEETSPVRAVSRTSSKRLSQPAGGLLDSITNIFGLSESPLLGHQSSDAAR
RRSLSSFPAPQDNVEPHPGASKEVRVPTTAVCVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVSAVKQ
TFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYIWNVLTGKLERTLAKYHSSSINAVA
WSPAGAHVVSVDKGNKAVLWSEF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgccgccggtttccccccctggaagcggcacatcgcggcggag
ctgcggcggcgggaccggctgcagcggcaggccttcgaggagatcatcgggcagtataac
aagctactagagaagtcggaccttcatgcggtgctggctgataagcttcaagcagaaaaa
tatgacatgcagagcagacatgagatcagtccaggacatgatagcacatggaatgatgct
cagttgcaagaactggcacagctgaagataaagcatcaagaggagctgacagagctgcat
aagaaacgtggcgagttggcccagtctgtaattgatctgaataaccaaatgcagcagaag
gacaaagagatgcagatgaatgaagcaaagattgcagagtatttgcaaaagatctctgaa
ctggaaacagagtgccaggaattgcgtagcaaactgcaagatcttgagcgagctaatcag
acactgaaagacgaatatgatgctctccagatcaccttcaatgccttggaggagaaactg
aggaaaactactgaagacaaccaggagttggtctcgcgttggatggcagagaaagcacaa
gaagccaatcgtttgaatgcggaaaatgaaaaggattcaaggagacgacaagccaggctg
cagaaggagctagcagaagctgccaaagaacccctgcctgttgaaccggatgatgatatt
gaagtacttgcagatgaaacctctgacacagctgaggagacatctccagtgcgagctgtc
agccgaacatccagtaagcgactctcccagccagctggaggccttctggactctatcact
aatatctttggtctgtctgagtctccccttttgggacatcaatcttctgatgctgccagg
aggcgttctttgtcctcgttccctgctccccaggataatgtagagccacatccaggtgcc
agtaaagaagtgagagtgcccactactgccgtatgtgtctttgatgcacatgatggggag
gtgaatgcagtgcagttcagccctggctcccggttactagcaacaggaggcatggaccgc
agggttaagctttgggaagtcttgggagataggtgtgagcccaaaggttccctctctggt
agtaacgctgggattacaagcatagaatttgatagtgctggttcttacctcttggcagct
tcaaatgactttgccagcagaatctggacagttgatgacaatcgattacggcacaccctg
acaggtcacagcggtaaagttctgtcagccaagttcttgctcgacaatgcacgcattgtt
tcaggaagtcatgaccggactctcaagctctgggacctccgcagcaaagtttgtataaaa
acggtgtttgcaggatctagctgcaatgacatcgtatgtactgagcaatgtgtaatgagt
ggacattttgataagaaaattcgtttctgggacatcagaactgaaagcatagtaaaagaa
ctggagctgcttggaagaatcacagctctggacctgaactcagagcgaacagagcttttg
acctgttcccgtgatgatttactaaagatcattgatctgcgtgttagtgctgtcaagcag
acattcagcgcccagggattcaaatgtggctctgactggacaagagttgtgttcagccct
gatggtaactatgtggctgctggttcagctgatggggccctctacatttggaatgtgctc
actgggaaattggagaggacacttgcgaagtatcacagttcttctatcaatgcagttgcg
tggtcaccagcgggtgcccacgtggtcagtgtggacaaaggaaacaaggctgtcctgtgg
tctgaattttga
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