Gymnogyps californianus (California condor): 127020421
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Entry
127020421 CDS
T08687
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127020421
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gcl03310
]
127020421
Transcription factors [BR:
gcl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127020421
Nuclear receptors [BR:
gcl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127020421
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127020421
NCBI-ProteinID:
XP_050758918
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Position
11:5473789..5917780
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AA seq
524 aa
AA seq
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MESAPAAPDPAASEPGSSVSEAAAGARDTPVNLEPARKSDAPAPVRRQSYSSSSSRGISV
TKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDR
TSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEA
EPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGI
KPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQIT
WQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAG
SLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHLTEDE
IALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRA
LCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgctccggcagcccccgatccagcagccagtgagccgggcagcagcgtctcc
gaggcggccgccggcgccagggacaccccggtgaacctggagcctgcccggaaaagcgat
gcgccggctcctgtccgcaggcagagctactccagcagcagcagcagaggtatttctgta
acaaagaagactcatacatctcaaattgaaattattccatgcaagatctgtggagacaaa
tcatcaggaatccattatggtgtcattacatgtgaaggctgcaagggctttttcagaagg
agtcagcaaagcaatgctacgtactcctgtcctcgtcagaagaactgtttgattgaccga
actagtagaaaccgctgccaacactgtcgattacagaaatgccttgctgtggggatgtct
cgagatgctgtaaagtttggtcgaatgtcaaaaaagcagagggacagcctgtacgcggag
gtgcagaaacatcgaatgcagcagcagcagcgagatcatcagcagcaaccaggagaggca
gaaccactaacaccaacatacaatatcaccaccaatgggttaacagagctacatgatgac
ctcagtaattacattgatgggcatacccctgaaggtagcaaagcagactctgcagttagc
agcttctacttagacatacagccttctccagatcagtcgggtcttgatattaatggaatc
aaaccagaaccaatatgtgactacacaccagcatcgggcttcttcccttattgttctttt
acaaatggggagacctctccaactgtgtccatggcagaattagaacatcttgcacagaat
atttccaagtcacacatggaaacttgccagtacttgcgagaggagttacagcagataaca
tggcagacttttctgcaggaagaaattgagaactaccagaacaagcaaagggaggtaatg
tggcagttatgtgcagtcaaaataacagaagctatacagtatgtagtggaatttgccaaa
cgcattgatggctttatggaactgtgtcaaaacgatcaaattgtgcttttaaaagcaggg
tctttagaggttgtgttcatcagaatgtgccgtgcctttgactcccagaacaacacagtc
tactttgatggcaagtatgctagcccagaggttttcaagtccttaggttgtgaagacttc
attagttttgtgtttgaatttggaaaaagtttatgttctatgcacctgacagaagatgag
atagctttgttttctgcgtttgttttaatgtcggcagatcgctcatggcttcaggagaaa
gtaaaaattgaaaaactccaacagaagatccagctagcacttcagcatgtcctacagaag
aaccaccgagaagatggaattctaacaaagttaatatgcaaagtgtctactttaagagca
ctgtgtggacgacatacagaaaagcttatggcatttaaagcaatatacccagacattgta
cgacttcattttcctccactttacaaggagttgttcacttcagaatttgagccagcgatg
cagattgatgggtaa
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