Gymnogyps californianus (California condor): 127020460
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Entry
127020460 CDS
T08687
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04120
Ubiquitin mediated proteolysis
gcl04144
Endocytosis
gcl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127020460
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127020460
09144 Cellular community - eukaryotes
04530 Tight junction
127020460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127020460
04121 Ubiquitin system [BR:
gcl04121
]
127020460
03029 Mitochondrial biogenesis [BR:
gcl03029
]
127020460
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127020460
Membrane trafficking [BR:
gcl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127020460
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
HECT type E3
127020460
Mitochondrial biogenesis [BR:
gcl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
127020460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
127020460
NCBI-ProteinID:
XP_050758996
LinkDB
All DBs
Position
11:9279875..9345499
Genome browser
AA seq
1310 aa
AA seq
DB search
MARRLRLHFATQRSNTDPLSETSEDVLDSSNCMYFKNLQSSAPNVTQMKLTPRQVAYAPV
TQQVINQEENATISSLQIKKSTSLHISLQSRKHSGCFRSGDAVATGEDTSFIGIGNEGNC
GARIVVDHRSNDSLLSDTALCNGSLSSIAASDSGSFSSAGSDYGSCASTTSDGGSYSNSV
ISDSGSGALSASDGTFCSSVEHDDSSYRSTANKCNPYRNNSPQETLCRNNTTFDQDALSV
RKKTKIPLRRCSSLVIFPRSPSSTPPASPVSSGQLPHRGAYQTSHKLIISPSELAQKEDQ
TISKGFLSTAVNGLRLSKTVCSSGEVRDIRPLYLNTSLQDKSKILSSSEQATCEEVSDGF
SCISVHLTRRAFASSSETVNGCCSQELNLNACAKYPHLKLARSTSACLPSKVDSEYQINI
NELERPTAQLSKTHHVLQRSVSLEGSGQKVSCCLSSLKYKCHSARTSQLHIQFKPGNEGK
TTGVKKRYGTSKREMCSTSLWRPHKTRDDFLGQVDIPLYQLPTENPSMERPYTFKDFVLH
PRSHKSRVKGHLRLKMTYLPKSNGSEEETTEQAEELEPGWIILDQPDAASQPQQQQQESP
PLPSGWEERQDILGRTYYVNHEFRRTQWKRPTAQDNVAVADIGSVQLEAQHVFTHRRQIS
EDTENLDNRDSPESWEIITEDEATMYSNQNPQIPLSQSSCDIQTHLAEELNTRLTTSGSS
ATGQSAACTNHSSRRGSLQTYRVEEQPAHPVLLPTSSGLPPGWEERQDEKGRSYYIDHNS
RTTTWIKPVVQIATETGQLSAAQSISIGRQPQATSSDSSQQSSQQQPEMEQGFLPKGWEV
RHAPNGRPFFIDHNTKTTTWEDPRLKISAPPRRKTSLDPVDLGPLPPGWEERTHTDGRIF
FINHNTKKTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRKKLKKQSDIPNRFEMKIHRT
TILEDSYRRIIAVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYGLFEY
SATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPIT
LHDMESVDSEYYNSLRWILENDPTELDLRFIVDEELFGQTHQHELKSGGSEIVVTNKNKR
DYIHLVIQWRFVSRVQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVADWKL
HTKYKNGYNINHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLF
TVEQWGTPEKLPRAHTCFNRLDLPPYDSFEDLWDKLLLAIENTQGFDGVD
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacggttaagattgcattttgctacccaaagaagcaacacagatccattatcg
gaaacctcagaagatgttttggatagtagcaattgtatgtacttcaaaaatttgcagagt
tctgcacctaatgttacacaaatgaaactgactcctagacaagttgcttatgcacctgta
acgcaacaagtaattaatcaagaggaaaacgcaactatttcttcattgcaaataaaaaag
agcacctcactgcacatttccctacagtctagaaagcatagtggatgttttcggtctggt
gatgctgtagctactggtgaagacacttcattcattggtattggtaacgaaggaaattgt
ggcgctagaattgtggttgatcatcgatctaatgatagccttctgagcgatactgctctg
tgcaatggcagtcttagcagtattgcagccagcgacagtggatcgttcagcagtgctggc
agtgactacggatcatgtgcaagtaccacaagtgatggaggttcatatagtaacagtgtc
atcagtgacagtggtagtggcgctctttcggcaagtgatggtactttctgtagtagtgtt
gaacatgatgattcttcatatagaagcactgcaaacaaatgtaatccctataggaacaac
tcacctcaggaaactctgtgtagaaataatactacttttgaccaagatgctttgtcagtg
aggaagaaaactaaaattccactgcgacgttgttcatcactggttattttccctaggagt
ccttccagtactcctccagcttctccagtaagctcaggtcaactaccacatagaggcgcc
tatcaaacatcccataaactaattatttctcctagtgagctggcacaaaaagaagatcaa
accatttccaagggattcctttcaacagcagtcaatggacttcggctgtctaaaacagtt
tgctcttctggtgaagtcagagacattcgaccactttacttgaatacatcattacaggac
aaaagtaaaattttgagtagttctgagcaggcaacttgtgaagaagtatctgacggcttc
tcatgtatttcagttcatctcactcgaagagcatttgcatcaagcagtgaaacggttaat
ggctgttgcagtcaagagttaaatctgaacgcctgtgcaaaataccctcatttaaaactg
gcacgtagcacatctgcatgtttaccctcaaaagtagattcagaatatcagattaacata
aatgaactggaaagaccgactgcacagttgagcaaaacccaccatgttttgcaaagaagt
gtttcgttggaaggatcaggtcaaaaagtttcttgctgtttatccagccttaaatacaag
tgtcacagtgcaaggacgtctcagttgcacatacagttcaaacctgggaatgaaggaaaa
acaactggtgttaagaaaagatatggaacctctaaaagggaaatgtgtagcacttctttg
tggaggccccataagactcgagacgattttcttgggcaagtggatattcctctttatcag
ttaccgacagaaaatccaagtatggagagaccatatacatttaaggattttgttcttcat
cccagaagtcataaatcaagagttaaaggccaccttagattaaaaatgacttacttacct
aaaagcaatgggtctgaagaagaaaccacagaacaggctgaagaattagagcctgggtgg
attatattggaccaaccagatgctgctagccagccacaacagcagcagcaagaatctcct
ccactgccttcaggctgggaagaaagacaagatatccttggcaggacctactatgtcaat
catgaattcagaagaactcagtggaaaagaccaactgctcaggacaatgtagctgttgca
gatattggtagtgtgcagttggaggcccagcatgtgttcactcatcggcgacagatatca
gaggatacagaaaatctagacaacagagattcccccgagagctgggaaattataactgaa
gatgaggcaacaatgtatagcaatcagaaccctcaaatacctctctcacagagtagttgt
gatatacagactcatcttgcagaagaattgaataccagacttactacctctggaagttca
gctactggccagtcagcagcctgcactaaccattccagcagaagaggtagtctgcaaaca
tacagagttgaagagcagcctgcacatccagtgttactgcctacttcatctggattaccc
ccaggctgggaagaacggcaagatgaaaaagggaggtcatattatatagatcacaattct
agaaccactacctggataaagccagttgtacagattgctacggaaacaggtcagttgtca
gctgcgcaaagtatttctataggaagacaaccacaagcaacatcaagtgattcatcacaa
cagtcttctcagcagcagcctgaaatggagcaagggtttctccctaaagggtgggaagtc
cgacatgcacctaatgggagaccattctttattgaccacaataccaaaactacaacatgg
gaagatccaagactgaaaatttctgctcctccaaggagaaagacttccctagatccagta
gatctgggcccgttaccaccagggtgggaagagagaactcacacagatggaagaatattc
ttcataaaccacaatacaaagaaaacacaatgggaggatcctcgactgcagaatgtggca
ataactggaccagctgtgccttactccagggactataagcggaagtatgagttcttcaga
aagaaattgaagaaacagagtgatattccaaatagatttgaaatgaaaattcatcgcaca
acaatccttgaagattcttatagaagaattatagctgtaaagagagcagatttccttaaa
gcaagactttggattgaatttgatggtgaaaaaggtttagactatggaggagtggccagg
gaatggttcttccttctctctaaagaaatgtttaatccttattatggattattcgaatat
tcagctacagataactatactctgcagatcaatccaaactctggactttgcaatgaagat
catctctcttatttcaagtttataggtcgtgtagctggaatggctgtttaccatggcaaa
cttttggatgccttttttattcgtcctttttacaagatgatgctccaaaaaccaataaca
cttcatgatatggagtctgtggatagtgaatattacaattctctgagatggattcttgaa
aatgatccaacagaactggacctcagatttatagttgatgaagaactttttggtcagacc
catcaacatgaactgaaaagtgggggatcagaaattgtcgtcaccaacaagaacaagaga
gactacattcatcttgtaattcagtggagatttgtgagcagagtacagaaacaaatggca
gcctttaaagagggcttttttgaactaataccacaggatctgattaaaatttttgatgaa
aatgagctagagttactaatgtgtggactgggagatgtagatgtggctgattggaaacta
catacaaaatacaaaaatggctacaacataaaccatcaagtaatacagtggttctggaag
gcagtcttaatgatggactctgaaaagagaataagattactccaatttgttactggcaca
tcacgcgtacctatgaatgggtttgctgagctgtatggttcaaatggaccacagttgttt
acagttgaacagtggggtacccctgaaaaattgccaagagctcatacctgctttaatcgc
ttggatttgcctccatatgactcgtttgaagatttatgggataaacttcttctagcaatt
gaaaatactcagggttttgatggggttgattaa
DBGET
integrated database retrieval system
