Gymnogyps californianus (California condor): 127020468
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Entry
127020468 CDS
T08687
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127020468
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127020468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
PRESAN
Motif
Other DBs
NCBI-GeneID:
127020468
NCBI-ProteinID:
XP_050759015
LinkDB
All DBs
Position
11:23772230..23806607
Genome browser
AA seq
2373 aa
AA seq
DB search
MQKENKVSKRTECCIFSFLWENTEDDDLQADKTKILALSKSHELFVYEFTVEDGKYNPIS
LHCCKEDTLKKLLEAKNISLSSVFSLRILSFGSNKCILLLNKFIVVHLTFPGKDSPLETC
DCFTLDLPPQVLERITDTQFCRGILFLLDSSGWIYIFDSVDGAKLADVNVALCQGDVQDE
DRSPAITSPLTAVKVSRDLSVAVIISSSNYAISVDLNMYFRQFPGHLLCKRDSENLPVKP
PEGLDEDDLASSDYSMELLSLPFRTDRSWKAHLSSLCDTVRRRRPGSPDLVNDLNLPWYQ
FFTHLEDHDPEICENSEKMVAFVPRVVTQAPSKPLQSNGTNLNDARQQWKQIPVEAPQEV
VKLECKLVTGVKALFVVLTDDKGLTLALWDFESQDVMYYYFGKNTLYVDCSEEVPLCLLL
TEHGLSLVLFGLTQEEFLNRLMIYGSAGVVDSVCHLNGWERCSIPIHALEAGLENRQLDT
VDLFLKSKESLFNLSAPCSGPEQSTDSASQSYLKNLEELRPALNLLCSAIKENDMEPHSK
HFSEQLLNLTLTFLSKQLEEIFVHTEEPDEFLQKGADILTDYIIKLRKFLRKYPRPEINT
VHTGSDLDEDLPALEESHMWEKLTPEEVIAEAILSNKMPEAQTFFRMHQHPAQSLQEFIQ
TGLNLVYDRLLKDNTREASELLRNMGFDVKEELHKICFYTVDRHVRDLLVKVLREENYFS
EKEEKMIDFVHQVESFYSEPFQENKEVQSLSRYWRKEQDFSRHTAVLDSLLNCDRHRVHN
RRVRVMFNWAQWWDELIREMILLPRKPRQELKTCNPEVLWMHLTAQHDWLNICSWIEESE
PNQTLCGQANWPSLTPDVIDRNMLCSSYMRNDILNKLARNGIFVRSELEDFELLLQRLSY
LGGVLQNPHPVPKYSAASGLDFHARFVLHCLEHNLQYLLYTYLDYYSLTPSNCPILDNKE
LHEAHPWFEFLVQCRGVASNPRDPKMIFQASLANAQILIPSNQASVSSMLLEGRTLLALA
TTMYAPGGIDQVLQNEDVEKPLKKVDPQLLKMALTPYPKLKAALFPPCTSHGILPPDISL
YHLVQSLVPFDPTKLFGWQSTNTLAVSDASSDFPHFSSPELVNKYAIMERLDFLYYLHHG
RPSFAFGTFLVQQLVKSKSPKQLIQQAGNEAYILALSFFSVPSVGAACVCFLELLGLDSL
KLRVDIKVANIIFNYRTRNEDSQHNQIRESLVEKLTKLADGEKAAAAEVLISLEAAFWDA
VEHQGIKKTSSDSRRQWSLVMQFCKLHNIGLSTSYLKECAKSNDWLQFIIQTQLYSYQPD
EVISILQDFTPILQDHLMLALEKLPFLCPDAGSPDNSTASVFQSKYADSLFQILFQCQGN
SNPSCYLLTEGLREHAPILSVLAACFQDANIIHCLCVWIITTVDHTTRAEATNHIQSSTE
NHEWDLHDLSVIWKVFLRKQKSKTLLNGFQLFLKESPLLYILEMYELCMNCKKYNEAKTK
LEKFQESLTKLKTEDEPAASELPVQWLESQALFLLELMMQQCRTEYELGKLLQLFAAADN
LLLDGPYVKKLCALSETLKDSSISINRSILTSYNMETFQSECRPILEQLQEKGMFSLARE
VAALAELPVDNVVTQEVLRDLHHLRDIGQWHQNQTRIEFWKKCNDNFMKNSISSKAASDF
FFDQANTVFESLANEKINSIMERHLLLTLAGHWLAKNDSVSLHELEEIEKQIWICRIAQQ
TLSTDEGSGKSRFSSHVVANRDLTFDNLAKEFSFSKLPALNTPKYLKLEGLAFRESQQTL
TNDEEESLKFLIGCLLDEGSVHEASRVCQYFHFYNRDVSLVLHCRALASGETDLDKLHAD
IQTLLAAREKTSESSASQQSRVPSASSLEDWTHIVTPSLDDQVVISLKALIDECVHGRNY
CRQVLCLYELSKELNCSYSEMSAHDPEKVLRAILSSHQPDRCRKAQAFITTQGLQPETVA
ELVAEEIMQELLASSEGKGQKQVLNPAAESQAFLQLAKLCQDHTLVGVKLLDKIASVPRG
ELSCITELLILAHNCFSLTCHMEGITRVLQAARLLTDEHLAPKEEYGLVVRLLTGIGRYN
EMTYIFELLHEKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCRE
IGENHEAAACIQLKLIESQPWEESLRDVANLKKLLMKALTLFIDAAESYSKDSCVRQSLR
CSRLTKLVTLQLHFLNTGQSTMLINLNRQNLMDAIMSLPRFYQAAIVAEAYEFVPDWAEV
LYQQVITKGDFTYLEEFKQQRPLKPSIFEEIAKKVKQHPPTDAALKNLKKLLTYCEDIYT
YYRLAYDNKFYDVVNTLLKDAQTGCCLNDMLSN
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagagaataaggtcagtaaacgtactgaatgttgtatcttcagcttcttgtgg
gagaatacggaagatgatgatctgcaagcagacaagacaaaaatactggctcttagtaaa
agtcatgaactgtttgtctatgagttcactgtagaagatggaaaatacaacccgatttcc
ctgcactgttgtaaggaagatacacttaaaaagctccttgaagctaaaaacattagcctg
tcttcagttttctctttgaggatactgtcttttggaagcaacaaatgcattcttctgctc
aataagtttattgttgtgcatcttacctttcctggaaaagactcacccttagagacatgt
gactgctttacccttgatttgcctccacaagttttggaaagaataacagatacacaattc
tgcagggggatcctgtttctgttagatagttctggctggatttacatatttgactctgtt
gatggtgcaaaactagcagacgtcaacgtagcactctgccagggagacgtgcaggatgag
gaccggagtccagccatcacatcaccactcactgcggtgaaagtgtcgcgtgatctcagc
gttgctgtgatcatcagttcttccaactatgccatctccgtggatctaaacatgtacttc
agacagttccctgggcatttgctctgtaagagagattctgaaaaccttccggtgaagcct
cctgaaggacttgatgaggatgaccttgctagttctgactatagcatggagcttttgtca
ttgcctttccgcacagacaggtcctggaaggcacacttatcctcactatgtgatacagta
aggagaagaagaccaggttctccagatttggtgaatgacttgaatttaccttggtatcag
ttttttacccatcttgaagatcatgatcctgaaatctgtgaaaattcggagaagatggtg
gcttttgttccgcgggttgttacacaggccccttccaaaccattacaaagcaatggtaca
aacctcaacgatgcaagacagcaatggaaacaaatccctgtagaagcaccacaagaagtg
gtgaaactggagtgtaaattggtaactggagttaaggccctgtttgtagtattaacagat
gacaaaggattgactcttgctctctgggattttgagtcgcaagatgtgatgtattactac
ttcggcaaaaatactctttatgtggattgcagtgaagaggtgccattatgtctacttctg
acggagcatggtctctccttagtgctgtttggtttaactcaagaagagtttttgaataga
ttgatgatctatggcagcgctggagtcgtagattctgtttgtcatctcaatggatgggaa
cgatgttcaattccgatacatgcgctagaggcaggtttggaaaatcgtcagctagacaca
gtagacttatttttaaaaagcaaagaaagtcttttcaatctgtctgcaccctgctctgga
cctgaacagtctactgatagtgcatcccagtcttacctgaaaaatttggaagagctgagg
ccagctttaaacttgctttgctcagcgatcaaagaaaatgatatggagcctcacagtaaa
cacttctctgagcagctactaaacctcacgttgactttccttagcaagcaacttgaagaa
atttttgtgcacacagaggaacctgatgaattcctgcagaagggtgcagatattttaact
gattacattattaaacttagaaaatttctgagaaaatatcctcgaccagaaataaatacg
gtacacacaggaagtgatcttgatgaggacctgcctgcattagaagaaagccacatgtgg
gaaaaactgacaccagaggaagtcattgctgaggccatcttaagcaacaaaatgccagag
gcccagaccttcttccgaatgcatcagcatcctgctcaaagtcttcaagaatttattcag
acaggtttgaatctggtctatgaccgtcttctgaaggacaataccagagaggcctcagaa
ctcttaagaaatatgggctttgatgtgaaggaggaattgcataagatatgtttctacaca
gttgatagacatgtacgagatttgttggtgaaagttttacgagaagaaaattatttttct
gaaaaagaggagaaaatgatagactttgtgcatcaggttgaaagcttttactcggaaccc
ttccaagaaaataaagaggttcaatctctttccaggtactggagaaaggaacaagacttt
tccagacatacagctgttctagattcgttgttgaattgtgatagacatcgggttcacaat
aggagagtcagagtgatgtttaactgggctcagtggtgggatgagcttattcgggaaatg
attcttctccccaggaaaccacgccaagaactcaagacatgtaatcctgaggttctttgg
atgcacttgacagctcagcatgattggcttaatatttgttcgtggattgaagaatccgag
cccaaccagactttgtgtggacaagctaactggccctctcttactccagacgttattgac
cggaacatgttatgtagtagctatatgagaaatgatatattaaacaagctggctagaaat
ggaatttttgtccgttctgagttggaagattttgaacttctgctccaaagactgtcttac
cttggaggagtactgcaaaatcctcaccctgttccaaaatacagtgctgcaagtggtttg
gacttccatgctcgttttgtccttcactgtttagaacataatttgcagtatctgttgtac
acttacttagactattacagtttaacaccttcaaattgccctattttggataacaaggaa
ttgcatgaagctcatccctggtttgaattccttgtgcagtgtcgaggggttgccagcaat
ccacgagatccaaagatgatttttcaggctagtctagcaaatgctcagatcttgattcct
agtaatcaagccagtgtgagtagcatgctactggaaggacgtacactattagcacttgct
actacaatgtatgcacctggaggtattgatcaggttcttcagaatgaagatgtggaaaaa
cctctaaagaaagttgatccacagctcttaaaaatggcgttgactccttatcccaaactc
aaagctgctctctttcccccgtgcacttctcatggaattttgccacctgacatctctctt
taccatcttgttcagtcattagttccctttgatcccactaaattatttggctggcagtca
acaaatactcttgctgtatcagatgcatcaagtgactttcctcatttttcatcccctgaa
ctggtgaacaaatatgctataatggaacgactggattttttgtactatttgcaccatgga
cgtccatcatttgcttttggtacatttttggtccagcagttagtaaagagcaaatcccca
aaacagttgattcagcaagcaggaaatgaagcctatattttagctctttctttcttcagt
gtaccttcagtgggagcagcctgtgtgtgttttctagaattgctcggtctcgacagcctc
aaactcagggtcgatattaaagttgcaaacataattttcaattacagaactagaaatgaa
gactctcagcacaatcaaataagagaatctttggttgaaaagttaacaaaattggctgat
ggtgaaaaagcagcagcagcagaagttcttatctccttagaagcagccttttgggatgca
gttgagcatcaaggaataaagaagacatctagtgactctagaaggcagtggtctttggta
atgcagttctgtaaactccataatattggactgagtacatcttacctaaaggaatgtgcc
aaatccaatgactggctgcagttcatcatccaaacccagctgtacagctaccagccagat
gaggttatttctatccttcaagatttcactcccattttacaagatcacttgatgttggca
ttggagaagttaccatttttgtgtcctgatgcagggagtcctgacaacagtactgccagt
gtgttccagagcaaatatgcagatagtctctttcaaatcctttttcaatgtcaggggaac
tcgaacccttcatgttaccttttgactgaaggattgagagagcacgctcccattctgagt
gttttagcagcatgtttccaagatgcaaacattattcattgtctctgtgtttggataatt
actactgtggatcatactaccagagctgaagcaacaaaccatattcagagctcaacagaa
aatcatgaatgggatcttcatgacctatcagttatctggaaagtctttttgagaaagcaa
aaaagtaaaacacttctaaatggcttccagctctttttaaaggagtcccctttactgtat
atactggagatgtatgaactatgtatgaactgtaaaaaatacaatgaagctaaaaccaaa
ctggaaaagtttcaggaaagtctcacaaaacttaaaactgaagatgaaccagcagcttca
gaattacctgtgcaatggttggaatcacaagcattatttcttcttgaattgatgatgcag
caatgtagaacggaatatgaattaggaaagctcttacagctgtttgctgcagcagataat
cttctactcgatggcccttacgtgaagaaactctgtgcactcagtgagaccctgaaggat
tcctccatatcaattaatcgctccatcctaaccagttacaatatggagacctttcagagt
gagtgcagaccaattctggagcagctacaagagaaaggaatgttctcactggctcgggag
gtagcagcactagctgaattgcccgtggacaacgtagttacgcaagaggttctaagagat
ctacatcatttaagagacattggacagtggcatcaaaaccagacaagaattgaattctgg
aaaaaatgtaatgacaacttcatgaaaaattcaatctccagcaaagctgcatctgatttt
ttttttgatcaggcaaacacagtatttgaatctttagctaatgagaagataaacagcatt
atggagagacatttgttgcttaccctagctggccattggctagccaagaatgactcggtg
tcactgcacgaattagaagaaatagagaagcagatctggatttgtcgcatcgcacagcaa
acattatccacagatgaggggtcaggcaagtcgaggttttcctcccatgttgtagcaaac
agggatcttacctttgataacttagctaaggagttttctttttcaaagctacctgctctg
aacacaccaaagtacttaaaactagagggtcttgctttcagagagtctcaacagaccttg
actaacgatgaggaggaatcactcaagtttctgatcggatgccttcttgatgaaggaagc
gtgcatgaagccagccgtgtttgtcagtatttccatttctacaacagagatgtttcactg
gtattgcattgcagagctctggcctcaggggagactgatctagacaaattacacgcagat
attcagactctccttgcagcaagagagaagacatctgaaagcagtgcatctcagcaaagc
agagtcccaagcgcatcaagcttagaagactggacacacattgtgactccatctctggat
gatcaagttgttatcagtctgaaggctctcatagatgaatgtgtccatgggagaaactac
tgcagacaggttctctgtttatatgaactttctaaggaattgaactgctcctacagtgaa
atgtcagcccacgaccctgaaaaagtgcttcgagcaattctgtcgtcccatcagccagac
agatgcaggaaagctcaggcattcatcaccacgcagggtctccagcctgaaactgtggca
gagctagtggctgaagaaatcatgcaggaattattggcatcttcagaagggaaaggacag
aaacaggttttgaaccctgcagctgagagtcaggcattcctacagcttgctaagctgtgc
caggatcatacattggttggcgtgaagttattggataaaattgcctctgtaccacgtggg
gaactgtcatgcattacagaattgctgattttggcccataattgctttagtttgacttgc
cacatggaagggatcactagagtcctccaagcagcccggcttctcacagatgaacatttg
gcacctaaggaagagtacggacttgtggttcgtcttctcactggaattggcagatacaat
gagatgacctacatatttgaactgctgcatgagaaacactactttgaagtgctcatgaga
aagaaattagacccaagcgggacattgaagacagctctgctggattacatcaagcgttgt
cgcccaggggacagtgaaaagcacaacatgatagccctttgcttcagtatgtgccgagaa
atcggagagaatcatgaggctgctgcttgcatacagcttaaactcattgagtctcagcca
tgggaggagtctcttcgggatgttgcaaatttaaagaaactgctgatgaaagctctgact
ctcttcattgatgcagcagaaagttattctaaggactcctgtgtccgccagtccttgcgc
tgcagtcggctgacgaagctggtaacactccagctgcattttctcaacactggtcagagc
actatgctgatcaacctgaacaggcagaacctgatggacgccatcatgtccttgcctaga
ttctatcaggcagctattgtggctgaggcttacgagtttgttccagattgggctgaagtt
ctgtaccaacaagtgatcaccaagggagacttcacttacttagaagaatttaaacaacaa
agaccactgaagcctagcatatttgaggagattgctaagaaagtgaaacagcacccacct
actgatgctgctctgaaaaatctgaagaaattgctcacttactgtgaagatatctacaca
tactacaggttggcttacgataacaagttctacgatgtggtaaatacacttctgaaggat
gcacagactggctgttgccttaatgatatgttatcaaactag
DBGET
integrated database retrieval system
