Gymnogyps californianus (California condor): 127020546
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Entry
127020546 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein
KO
K06792
aggrecan 1
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gcl00535
]
127020546
00536 Glycosaminoglycan binding proteins [BR:
gcl00536
]
127020546
04091 Lectins [BR:
gcl04091
]
127020546
Proteoglycans [BR:
gcl00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
127020546
Glycosaminoglycan binding proteins [BR:
gcl00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
127020546
Lectins [BR:
gcl04091
]
C-Type lectins
Lecticans
127020546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
CTD
Sushi
V-set
EGF
hEGF
EGF_CA
Motif
Other DBs
NCBI-GeneID:
127020546
NCBI-ProteinID:
XP_050759177
LinkDB
All DBs
Position
11:complement(15653242..15681701)
Genome browser
AA seq
2085 aa
AA seq
DB search
MTTLLLVFVCLRVITAAVSVELSDSSDGLEVKIPEQSPLRVVLGSSLNIPCYFNIPEEQD
TSALLTPRIKWSKLSNGTEVVLLVATGGKVRLNTEYREAISLPNYPAIPTDATLEIKALR
SNHTGIYRCEVMYGIEDRQDTIEVLVKGIVFHYRAISTRYTLNFEKAKQACIQNSAVIAT
PEQLQAAYEDGYEQCDAGWLADQTVRYPIHWPRERCYGDKDEFPGVRTYGVREPDETYDV
YCYAEQMQGKVFYATAPEKFTFQEAFDKCRSLGARLATTGELYLAWKDGMDMCSAGWLAD
RSVRYPISRARPNCGGNLVGVRTVYLYVNQTGYPHPDSRYDAICYSGEDVETLVPGQFID
ETESELGSAFTVQTVTQTEVELPLPRNATEEEARGSIATLEPIEITPTATELYEGFTVLP
DLFATAVTVETAAPEEENVTRGEVTGVWAVPEEVTTIALGTAITTETAEVSSVEEVVRVT
ATPGLEPASAFTVEDQLVRVTAAPGVGLLPKQPISPTGVVFHYRAATSRYAFSFVQAQQA
CLENNAVIATPEQLQAAYEAGFDQCDAGWLRDQTVRYPIVNPRSNCVGDKESSPGVRSYG
MRPASETYDVYCYIDRLKGEVFFATQPEQFTFPEAQQYCESQNATLASVGQLHAAWKQGL
DRCYAGWLADGSLRYPIVSPRPACGGDAPGVRTVYQHYNQTGFPDPLSRHHAFCFRALPP
AEEEGVTSFFEEEVLATQVIPGVEGIPSGEEVTVETEFATQPENQTAWETEVFPTDVSLL
SVSPAVFPPATVRPEETSTDASVSEVSGEVTVSGERQVSGESSASGWVSGVPDTSGEPTS
GVFEISGEHSGIGESGLPSVDLHTSGFLPGESGLPSGDLSGMPSGIVDISGLPSAEEDIS
VFTSRIPEISGMPSGVESSGLPSGFSGEISGTELVSGVSSGEESGLPSGFPTVSLVDTTL
VEVVTTAPARQEEGKGSIRVSGEGDLSGFPSTEWDTSGGVQGLPSGAELSGEPSGGPELS
GEPSGVPELSGEPSGGPELSGEPSGGPELSGWPSGLDVSGEPSGTHEVSGLVDLSGLTSG
IDRSGEASGITFVDASLEEVTTTPSITEAEAKEILEISGLPSGGEDASGMVSGSLDISGE
PFGHVDFSGSVSGVLEMSGHPSGVIDSSGEVSGVDVTSGLPSGEESGLTSGFPTVSLVDT
TLVEVVTQTSVAQEVGEGPSGMIEISGFPSGDRGLSGEGSGAMETSGFPSGTGDFSGEPS
GIPYVSGDISGATDLSGQSSAVTDISGEASGLPEVTLVTSDLVEVVTRPTVSQELGGETA
VTFPYSFGPSGEASTSGELSGETSALPESGTEISTAYEISGETSAFPETSIETSTIQEIS
GETSAYPEISIETSTVHETSGETSAFPEISIETSTVHEISGETSAFPEISIETSTVHEIS
GETSAFPEISIETSTVREISGESSAFPEIRIETSTNQEARGETSAYPEISIETSTVHETS
GETSAFPEISIETSTVHEISGETSAFPEISIETSTVHEISGETSAFPKISIETSTGHEIS
GETSAFPEISIETSTVHEISGETSAFPEIRTETSTSQEARGETSAFPEISIETSTVHEIS
GETSAFPEISIETPTIQEARGETSAYPEISIETSTVQEVSGETSAFPEIRMETSTSQEAR
GETSAFPEISVETSTVHETSGEASALPAANIETAATSLASGEPSGAPEEKEVPNATSGAV
THSVTGVSGEASVPGVVISTSTPDVEPTQGPRDPEEAQLEIDPSPPAVSGQETETALVLD
NPHLLATATAALPQVLQEAIDALGPTTEDTDECHSSPCLNGATCVDGIDSFKCLCLPSYG
GDLCEIDLENCEEGWTKFQGHCYRHFEDRETWMDAETRCRQHQAHLSSIITPEEQEFVNS
HAQDYQWIGLSDRAVENDFRWSDGHSLQFENWRPNQPDNFFAAGEDCVVMIWHEQGEWND
VPCNYHLPFTCKKGTVACGDPPMVENARTFGRKKDRYEINSMVRYQCNQGYIQRHVPTIR
CQPXGQWEEPRISCINPSNYQRRLYKRSPRSRSRPSGRAVHRPTH
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactgttagtgtttgtgtgtttgcgagtcatcaccgcagccgtctctgtg
gagctctcagacagtagcgatggcctggaagtgaagatacctgagcagtctcccctgcgt
gttgtcctgggaagctccctgaacatcccctgctacttcaacatcccagaggaacaggac
accagtgctctgctgaccccacggatcaaatggagcaaactctcaaacgggaccgaagtt
gtcttgctagtggccaccggtgggaaagtccggctcaacaccgagtacagggaggcgatc
tctttgcccaattaccccgccatccccactgatgccaccttggaaatcaaggcgctgaga
tccaaccacactgggatttatcgctgtgaagtgatgtatgggattgaggacagacaagac
acaatagaggtcctagtgaaaggcatcgtattccactacagagcaatctccacaaggtac
accttgaactttgagaaagcaaagcaggcctgtatccagaacagtgctgtcattgctact
cccgagcagctgcaagctgcctacgaggatgggtacgagcagtgtgatgctggctggctg
gctgatcagactgtcaggtaccccatccactggccccgcgagcgctgctacggcgacaag
gatgaatttccaggagtgaggacctacggtgtccgtgagccagatgaaacctatgatgtt
tactgctatgcagagcaaatgcaaggtaaagtcttctatgccaccgcccccgagaagttc
accttccaagaagctttcgacaaatgccgcagtttgggagcccgtttggccactacggga
gagctgtacttggcctggaaggatggcatggacatgtgcagcgcaggctggctggccgat
cgcagcgtccgctaccccatttccagagcacggcccaactgcggaggaaacctggtgggc
gtgcggacagtgtacctgtacgtcaaccaaacggggtaccctcaccccgactctcgctac
gatgccatttgctatagtggggaggacgttgagactctggtcccagggcagttcatcgat
gagacggaaagcgagctgggcagcgctttcactgtccagaccgtcacccagaccgaagtg
gagctacctctgccacgcaacgccacggaggaggaggcccgcggcagcatcgccaccctg
gagcccattgagatcacacccactgccactgagctgtacgagggcttcactgtcctgccc
gatctcttcgccaccgctgtcacagtagagacagctgccccagaggaggagaacgtgacc
aggggggaggtcacaggggtgtgggctgtacctgaagaggtcaccaccatagccttaggc
acagccatcaccaccgaaacggcagaggtgagctcggtggaagaggtcgtgagggtgact
gccacaccaggactagagcctgcctcagcgttcacagtggaagatcagctcgtgcgagtg
acagcagcccccggtgtcggtctcctccctaagcagcccatctcccccacaggtgtggtg
tttcactaccgtgccgccaccagcagatacgccttctcctttgtccaagcccagcaggcc
tgcctggagaacaacgcagttatcgccactcccgaacagctccaggctgcctacgaggct
ggctttgaccagtgtgatgctggctggctgcgggaccagacagtcaggtatcccattgtg
aatccccgaagtaactgcgtaggagacaaagagagctctccgggcgtgcggtcatatggc
atgcgcccggcctcagagacctacgatgtgtactgctacatcgacaggctcaagggcgag
gtgttcttcgcaacccagccagagcagttcaccttcccagaagcccagcagtactgtgag
agccaaaacgccacgctggcctctgttggccaactccatgctgcctggaagcagggcctg
gaccgatgctatgctggctggttagccgacggcagcctccgctatcccatcgtgagcccc
cgtcccgcctgcgggggggatgcgcctggcgtgagaactgtctaccagcactacaaccag
acaggctttcccgacccactgtcccggcatcatgccttctgcttcagagctctgccacct
gcggaggaggagggggtcacctcgttctttgaagaagaagtgctggcaacccaagtgatc
cctggagtggaggggataccctccggggaggaggtgaccgtggagacagagtttgccact
caacctgagaatcagacagcctgggagacagaggtctttccaaccgacgtgtcgctgctc
tcagtaagtccagctgtttttcctccagctaccgtaagaccagaggaaacaagtaccgat
gcttctgtcagtgaagtgtcaggagaggtgactgtatctggagaacgtcaagtcagtggt
gaatcttcggcatccgggtgggtatctggagtcccagatacaagcggagaaccgacttct
ggagtttttgaaattagcggagaacactcggggattggagaaagtggattaccatcagta
gacctgcataccagtggctttttacctggagaaagtgggctaccctcaggggacctaagt
ggcatgccttctggcattgttgacatcagtggcttaccttctgcagaggaagacatatcg
gtgtttacttcgaggataccagaaattagtgggatgccatctggagtggaaagcagtggg
ctgccttctggatttagcggagaaatctctggcactgagctagtcagtggcgtgtcatct
ggagaggaaagtggactcccctctggttttcctaccgtctctcttgtggataccacattg
gtggaagttgtaacaacagcaccagcacggcaagaggagggaaaaggatccatcagagtc
agcggtgaaggagatctgtcagggttcccgtccactgagtgggacaccagtggcggagtc
caaggtttaccctcaggagctgagctcagcggggagccctccggagggcctgagctcagc
ggggagccttctggggtgcccgagctcagtggggagccctccggagggcctgagctcagc
ggggagccctccggagggcctgagctcagcgggtggccctcaggactggatgtcagtgga
gaaccatctggaacacatgaggtcagtggcctggtggacctaagtggccttacttctggt
atcgatagaagtggtgaggcctcgggcattacctttgtagatgctagtttggaggaagtg
acaacaaccccctcaattacggaagcagaagcaaaagagattttggaaatcagtggattg
ccttcaggaggtgaagatgcatcaggcatggtatctgggagtttagacatcagtggcgag
ccttttgggcatgtagactttagtgggagtgtttctggagtgctcgagatgagcggacat
ccgagtggagtgattgacagcagtggagaagtctctggagttgatgtcaccagtggccta
ccgtctggagaggaaagtggactcacctctggctttcccacagtctctcttgtggatacc
actttggtggaagttgtaacacagacgtcagttgcacaagaggtgggagaagggccatct
gggatgatagaaatcagtggatttccttctggagacagaggactatctggagaagggtct
ggagccatggagactagtgggtttccttcagggacaggagacttcagtggagagccatcc
gggatcccgtatgtcagtggagacatttctggagccacagatctaagtggacaatcttca
gcagtgactgatattagtggggaggcctcagggcttccagaagtcactttagtcacttct
gatttagtagaagttgtgacaagaccaacagtatcacaggaactgggtggggaaacagct
gtcacatttccctacagttttgggccaagtggtgaggcctctacatctggtgaactaagt
ggggaaacatctgcattgccagaaagtggtacagaaatatcaacagcttatgaaatcagt
ggtgaaacatctgcatttcctgaaactagtatagaaacatccacaattcaagaaatcagt
ggggaaacatctgcctaccccgaaattagcatagaaacatccacagtccatgaaaccagt
ggagaaacatctgcatttcctgaaattagcatagaaacttcaacagtccacgaaatcagt
ggagaaacatctgcttttcctgaaattagcatagaaacttcaacagtccatgaaatcagt
ggagaaacatctgcctttcctgaaattagcatagaaacttccacagttcgtgaaatcagt
ggagaaagttctgcatttcccgaaattagaatagaaacatccacaaatcaagaagccagg
ggtgaaacgtctgcctaccctgaaattagcatagaaacatccacagtccatgaaaccagt
ggagaaacatctgcatttcccgaaatcagcatagaaacttcgacggtccatgaaatcagt
ggggaaacgtctgcctttcctgaaattagcatagaaacttcgacagtccatgaaatcagt
ggggaaacgtctgcgtttcccaaaatcagcatagaaacttcgacgggccacgaaatcagt
ggcgaaacatctgcctttcctgaaattagcatagaaacttcaacagtccacgaaatcagt
ggggaaacatctgcatttcctgaaattagaacagaaacatccacaagtcaagaagcccga
ggtgaaacatctgcatttcctgagattagcatagaaacttctacagtccacgaaatcagt
ggggaaacatctgcattccctgagattagcatagaaacaccaacaattcaagaagccagg
ggtgaaacatctgcctatcccgaaattagcatagaaacatccaccgttcaagaagtaagc
ggggaaacttctgcatttcctgaaattagaatggaaacatccacaagtcaagaagccagg
ggtgaaacatctgcatttcccgaaattagcgtggaaacatccacagtccacgaaaccagt
ggagaagcatccgcattgcctgctgctaacatcgaaacagctgccacatctttggccagt
ggtgagccttctggtgctccagaggagaaggaagttcctaatgcaacatctggagctgtg
acacactcggtcacaggcgtttcaggggaagcgtctgtcccaggtgttgtaattagtacc
agtactccagatgttgaaccaacacagggacccagggaccctgaagaggctcagctcgaa
atagacccctcccctcctgcggtttcaggacaagagacggagacagctcttgttctagac
aatccccatctgctggccaccgctactgctgccctgcctcaagtcttacaagaagcaata
gatgcattaggacccactacagaagacactgatgagtgccactcaagcccctgtctgaat
ggagctacctgcgttgatggcatcgactctttcaaatgcttatgccttcccagctacgga
ggggacctgtgtgagatcgatctggaaaactgtgaggaaggctggaccaagttccagggc
cactgctacaggcactttgaagacagggagacttggatggatgcagagaccagatgccga
caacatcaagcccacctgagcagtatcatcaccccagaggagcaagaatttgtgaacagc
cacgcgcaggactaccagtggatcggcctcagtgacagagctgtggagaatgacttccgc
tggtccgacgggcactctctgcaatttgagaactggcggcccaaccaacccgataacttc
ttcgcggcgggtgaggactgtgttgtgatgatctggcacgagcaaggagaatggaatgat
gttccctgcaactatcacctccctttcacctgcaagaaaggaacagtggcctgcggggac
ccccccatggtggagaacgccaggaccttcggtcggaagaaggaccgctacgaaataaac
tccatggtgcggtaccagtgcaaccaaggctacatccagcgccacgtgcccacaattcgg
tgccagccanatgggcagtgggaggagccacggatatcctgcataaacccctccaactac
cagcgcaggctatacaagaggagccccaggagccggtcaagacccagcggcagagccgtg
cacagacccacccattag
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integrated database retrieval system
