Gymnogyps californianus (California condor): 127020639
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Entry
127020639 CDS
T08687
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04350
TGF-beta signaling pathway
gcl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127020639
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127020639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gcl04515
]
127020639
Cell adhesion molecules [BR:
gcl04515
]
Immunoglobulin superfamily
DCC/UNC5 family
127020639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
SusE
TM_ErbB1
EphA2_TM
TMEM154
Herpes_UL74
Neur_chan_memb
FAM176
Motif
Other DBs
NCBI-GeneID:
127020639
NCBI-ProteinID:
XP_050759354
LinkDB
All DBs
Position
11:1706450..1919923
Genome browser
AA seq
1472 aa
AA seq
DB search
MAAGRARRLLGSLWIALLLGQPEPAGAAARSGSQSLLTGSLVRTFTPFYFLVEPMDILSV
RGASVIMNCSAFCETSPKIEWKKDGTFLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEG
YYQCVATVESLGTIVSRTAKLTVAGLPRFTSQPESSSVYKGNSAILNCEVNVDLAPFVRW
EQDRQPVFLDDRVFKLPSGALIISNATDMDGGLYRCIIESGGTPKYSDEAELKILPDPEV
PQNLVFVRQPSSLTKVTGQTAVFPCVAIGFPTPYIRWTRNEEELITEGYERFLLLAGGSL
EISDVTEEDVGTYTCIADNGNETIEAQAELTVQVPPEFLKRPANIYAHESMDIVFECEVT
GKPTPTVKWVKNGDMVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQL
IILDLDVAIPTLPPTSLTSATNDHLAPATTGPLPSAPRDVVATLVSTRFIRLTWRTPVSD
PQGDNLTYSIFYTKEGINRERVENTSRPGETQVMIQNLMPETVYVFRVVAQNKHGPGESS
VPLKVATQPEVQLPGPAPNIRAYAGSPTSITVTWETPLSGNGEIQNYKLYYMEKGQDTEQ
DVDVGGLSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVVVRTLSDVPSAPPQNLTLEVR
NSKSIMLHWQPPPAGTHSGQITGYKIRYRKVSRKSDVTESIGGTQLFQLIEGLERGTEYS
FRVAALTVNGTGPATDWISAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNI
VVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAV
TRPHSDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKIT
DARYYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAH
GTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV
IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQAS
GSAGKGSRPVDIGPDYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVF
CTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMT
DTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPP
QPVISAHPIHSLDNPHHHFHSGSLASPTRSYLHHQVNPWPIGTSMSHSDRANSTESVRNT
PSTDTMPASSSQTCADHQDPESTTGSYLANAQEEDSAQNLPTAHVRPSHPLKSFAVPAVP
PAGSTYDPALPSTPLLTQQAPNHPVHSVKTASIGTLGRTRPPMPVVVPSAPDVQETTRML
EDSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggagagcccggcggctcctcggctccctctggatcgcccttctcctcggg
cagccggagcctgccggcgccgccgctcggagcggctcccagagcctcctcacaggatcc
cttgtgagaaccttcactcctttttactttctggtggagccaatggacattctgtcagtt
cgcggagcttctgttataatgaactgttcagctttctgtgaaacttctccaaaaattgaa
tggaaaaaagatgggacttttctaaacttggtgtcagatgaccgtcgccagttgctacca
gatggatctttattaataaacagtgtggtgcattccaagcataataaacctgatgaagga
tattatcaatgtgtggcaactgtggaaagcctggggaccattgtcagcagaacagcaaag
ctcacggtagcaggccttcccaggttcaccagtcagccagaatcatcatctgtctataaa
ggaaacagtgcaatcctcaactgtgaagtcaatgttgatcttgcaccgtttgtgaggtgg
gagcaggaccgccagccagtctttctggatgatcgtgtatttaaattaccaagtggagct
ctaattattagcaatgctactgatatggatggaggactctatcgctgcatcattgaaagt
ggtgggacccccaaatacagtgacgaagcagagctcaaaattcttccagatccagaggtg
ccacagaacttggtgtttgtgaggcagccctcttcacttactaaagttactgggcaaact
gcagtttttccatgtgttgccataggatttccaactccatatatcaggtggacaagaaat
gaagaagagcttatcacagaaggctatgaaaggtttcttctgctcgcgggaggcagtctg
gagatcagcgatgttacggaagaggacgttgggacgtatacctgcatagcggataacgga
aatgagacgattgaagctcaagcagaacttacagttcaagttcctcctgaatttctgaag
cggcctgcaaatatttatgctcatgaatctatggacattgtgtttgagtgtgaggtgact
ggaaaacctactccaactgtgaaatgggtcaagaatggagacatggtgatcccaagtgac
tatttcaaaatcataaaagaacataatctgcaagttttgggtctggtgaaatcagatgaa
ggattctatcagtgcattgcagaaaatgatgttggaaatgcacaggctggagcccagctg
ataatacttgaccttgatgttgccatcccaacattacctcccacttcactgaccagtgcc
actaatgaccatctagcaccagctacaacaggaccattgccttcagccccgcgggacgtc
gtggccacccttgtctccactcgcttcatcagactgacgtggcggacgcctgtatcagac
cctcaaggagacaacctcacctattcaatcttctacaccaaggaaggtataaacagggaa
cgcgttgaaaatacaagtcgtcctggagagacacaagttatgatccaaaacctgatgcca
gaaacagtttatgtctttcgagttgtggctcagaacaagcacggccccggagagagctcc
gtaccgctgaaggtggcaactcagcctgaggttcagcttcctggtccagcacccaatatc
cgagcgtacgccggttcccccacctccattactgtcacctgggaaacgccgttgtctggc
aacggagaaatccagaactacaagctctactacatggagaaggggcaggacactgaacag
gatgttgatgtaggaggactctcctacaccattaatggattaaagaaatacacagagtat
agtttccgagtggtagcttacaataaacacggtcctggagtctcgactcaagatgttgtt
gtacgaacgttgtcagatgtccccagtgctccaccacagaatctaacgctggaggtacgg
aattccaagagcatcatgctacactggcagcctcctcctgcagggacacacagtggacaa
atcactggctacaaaattcgctaccgtaaagtgtcccgcaagagtgatgttacagagagc
attggtgggacccagctttttcagctaattgaaggtcttgaacgaggtacagaatacagc
ttccgagtagctgccttgactgttaatggtactggaccagctaccgactggatatcagca
gaaacgtttgagagtgatctagatgaaactcgtgttcctgaagttccaagttccttacac
gtccgcccgcttgtcaccagtatcgtagtaagctggactccacctgaaaaccagaacatt
gtggtgagaggctatgctatagggtatggcattggcagtcctcacgcgcagaccatcaag
gtggactataaacagagatactacaccattgaaaacttagacccaagctcccactatgtc
ataactctgaaagcgtttaacaacgttggtgaaggaatccctctgtacgagagcgcggtg
accaggcctcactcagacacttccgaggttgatttgtttgttattaatgctccatacact
ccagtgccagatccgtctcccatgatgccaccggtgggagttcaggcttccattctgagt
cacgacaccatacggatcacttgggcagacaactctctgccaaagaaccagaagatcacg
gatgctcgctactacacagtgcgctggaaaaccaatattcctgcaaatacgaagtacaag
actgcaaatgcgaccactttgagctatttagtgactgggttaaaaccaaataccttgtat
gaattctccgtgatggtgactaaaggtcgaagatcaagtacttggagtatgacagcacat
ggaacaacttttgaattagttcctacttctcctcccaaagacgtgactgtggtgagcaaa
gagggaaaacctcggacaataattgttaactggcagcctccatccgaagccaatggcaaa
attacaggatacatcatttactacagtacagatgtgaatgctgaaatacatgattgggtt
attgaacccgtcgtgggaaacagactgacccatcagatccaagaactgacccttgataca
ccgtattatttcaaaattcaggcccgcaactcgaagggcatggggcctatgtctgaggca
gttcagttcagaaccccaaaagctgaatcctcagataaaatgcctaatgatcaagcttca
ggatctgcagggaaaggaagccgcccagtggacataggaccggattacaaaccaccactt
ggtggcagtaacagtccccacggaagtcccacttctcccttggacagcaacatgctcctt
gtaatcatagtatctgttggagtgatcaccattgtgatagtggtgatagtcgctgtcttc
tgcacccgtcgtacaacttctcaccaaaaaaagaaacgagctgcctgcaaatcagtgaat
gggtcccataagtacaaaggaaactccaaagatgtcaagcctcctgacctttggatccat
catgaaagattggagctaaagcccattgataaatctccagatcccaatccaatcatgaca
gataccccaatccctcgcaactcccaagacatcaccccagttgataattccatggacagc
aatatccatcaaaggcggaattcctacagagggcatgagtcagaggatagcatgtccacc
ctggcaggaagaagggggatgaggcccaagatgatgatgccttttgattctcaaccacct
cagcctgtgattagtgctcatcccatccattcactcgataaccctcaccatcatttccac
tccggcagcctcgcttctccaactcgcagctatctccatcaccaggtcaacccgtggccg
attggcacatccatgtcccattcagacagggccaattccacagaatctgttcgaaacaca
cctagcacggacaccatgccggcttcctcgtctcagacatgtgctgaccaccaggatcct
gaaagcaccacagggtcttatctggctaatgcacaagaagaggattcggctcagaacctc
cctacggcacatgtccgtccttcccacccgctgaagagttttgcggtgccagcagttcca
ccagctggttccacgtatgacccagcattgccaagcacaccattactgactcagcaagct
cctaaccatccagttcactcagtgaagactgcgtcaattgggactttaggaagaactcga
cctcctatgccagtggtagttcccagtgcccctgatgtgcaggagaccaccaggatgctt
gaggactcggaaagcaattatgaaccagatgagctgaccaaagagatggcccacctggaa
ggacttatgaaggaccttaatgccatcactacagcatga
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