Gymnogyps californianus (California condor): 127020911
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Entry
127020911 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: protein NLRC5
KO
K22615
NLR family CARD domain containing 5
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gcl04054
]
127020911
Pattern recognition receptors [BR:
gcl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127020911
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
Atypical_Card
NLRC4_HD2
LRR_4
LRR_8
NPHP3_N
AAA
NOD2_WH
AAA_16
AAA_22
AAA_25
nSTAND3
NB-ARC
RNA_helicase
AAA_19
Mg_chelatase
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
127020911
NCBI-ProteinID:
XP_050759687
LinkDB
All DBs
Position
12:complement(23250025..23298021)
Genome browser
AA seq
1862 aa
AA seq
DB search
MQPPFQNDDLDLEAAIASARPQLVEFLSHRPDWLLMTSRRFLPGVALSGLDGIADHKEKV
SALLDLLEKAGPATWKQFAQYLCMECDLPMHLEILLISSAGEGNLSQKQEACTDESAQSS
VPKGLAQRRRRSTSVSDKDVKQQRLDSPEKYRHLLIDSIRQRYGSRRAAGAAAQDQTQPL
AFNQAFVNLVIRQSKASRLKERTDKPREDVAGAPEAEECVDTAVKVSDLFCSVVPSGTTK
VIFLFGKPGTGKTMLMHRICQKWAEGVLPQFLFTFLFEFRQLNLLKRKLTLKELLFDLFL
QPEDSPDAVFQYLLENAWRTLIIFDGLDEFAANMDMSASSKGGPTLTSRMSISELFLDLC
HGKLLPGCTVLVTSRPKRLPDFLLNTVDLLAEIWGFDHEKVEEYVSHYFHQHSFKEQAIA
HLKNNTKLLSMCLIPALCYVVCICLEYLLLKHQMSVELPQTMTQFYIKMLLIFINKQQGE
HAGGEETQLNCNRKAILGLCDLALKGLEDKKLVFYVGDIPEHVKEFASLHGLLTVFEVKT
SGTCPEAGYAFVHLSLQEFFAALCLMVSKKVDKNYLKKKFSLKSKWTLKNEAKTEFMESF
HIFLSGLSSKECRTFLMLLAEQDEAWVQDKQEAILLSLKKLAATHLTGPKVIELCHCTFE
TQDLEVTQHIGSLLNFKYEFKNFRLTPLDMSALVFVINSGHDLAHLDFAGCPMDNDCLEI
LAGCKNVERLSFRSRRCGDDFAAALSKSLRGMGSLKKLELTGGSITAEGMTDLVQASSQC
LQLEEINLQDNRIRDLEVKRVMDLFSRMEKLKKIDLSNNDLSLNAVLLLAKEVIACQNAT
ELCVRKDTVIIYFSGLSGKVPRSLDLRCDENKEHVTPTRFVKLCLQDRSLSSQHAKEIVA
ILQSCPCLSEVDLSGNKLGDEGCGRLLENLPWISISKQLDLSQNCLSVNGICSLLKSINT
CQKMMEVQVSLCRETAVLKFAEDREFASLPPREEPVFSTGDQQYGEENQTPTAPRKIRLT
DSRFQASDLEKLCAVLKECSSISELDLSNNYLGDEGLLQLFQFLPNLKMLSSLKLNDNQI
SLNSVFFLAQSLSTLEHIKTMNLSLGHTQVVHLTFWERIRVRSTSRWRSSFLAHPKHEAK
GRCFRLRDCRVGPEDVTRLCQILAQCPQLTEIDLSGNSLSDQSIERLLSFLPHFCHLTLL
SVRNNTFSPRCTVLLINSINLCERIRMVEVRSSENAFLHLGARVQSQRTSCRLTDCAIGQ
GQIDELCRVLEQHGWXAEVDLSRNQLRDEGLRCLLDHLCRVPVTCSLNLSHNRISQDGVL
HLINAFATSGNTTEVQVSLCSKATLIIKLTSRDDPRKILRLAECNFQPEHLEKLCLLLEK
CTGLTEYISSNNNVTVQAAERLLHSLRKNLGPLKISIEEPWVCKESVTNLLELAVRACGN
ITEITICKDKTLFQLGVRFPHCLEKVESVVSRLNLYKPEIKHACFYQRVCEKCAQLQELR
WSHVELHNDEAEMLVRILLPLPELKKFGLTSSSIMPTGIDYLITGLQNCQAIEELNLGYM
KLSSADIPKLVLGLREMPSLKRLILNHNSIGNDGCSRLAEALRNMRYIEEINLSHNKIGD
PGLINLAAVLLEMQNLKRIDLSGNSPSPAGGEKLMEALAYCKCIEELLLSRNVFGDRTAV
KLALCLPHMTSLRILHLQNNNIGPAGGMELARALVACGLLEEISLSENDLGEGSIHALSK
GLPCFKHLRKIDLKLCGITDDASKSLSHGFRQCPSMEEIILSWNTLGDGGAGEMATALPG
MEKLKVLDLEKNRIGACGATKLAEELAKCPEIQFVRLWDNPVPKGLAENLTSQDPRLCFS
FY
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccccatttcagaatgatgatctcgacctggaagcagccatagcaagcgcccgc
ccccagctagtggagttcctcagtcaccgtcccgactggctgctcatgacctcccggcgc
ttcctcccaggggtggccctgagcggcctggatggcattgccgaccacaaagaaaaagtc
tcggcgctccttgacctgctggagaaggctggccctgccacctggaaacagtttgcacag
tacctctgcatggagtgcgacctccccatgcatctggagatactgctcataagttctgcg
ggagaaggtaacttaagccagaaacaagaggcatgcacagatgagagcgcccagtcgtct
gtgccaaaagggttagctcaacgtcgccgtcgcagcacctctgtgagtgataaggatgtt
aagcagcaacgactagattcacctgaaaagtaccggcatctcctcattgattctatccgc
cagagatacggaagcaggagagcagcaggagcagcagcacaggatcaaacgcagccactg
gccttcaaccaagcctttgtcaaccttgtcattcggcagagcaaagcctcccgcttaaaa
gagagaacggataaaccccgagaggatgtggcaggtgctcctgaagcagaagaatgtgtg
gatacagccgtgaaagtgtcagatctgttttgtagtgtggtcccatcgggcacgacgaag
gtgatcttcttgtttggtaaaccaggtacaggcaagaccatgctaatgcacaggatttgt
cagaaatgggcagaaggtgtcctacctcagtttctcttcactttcctgtttgagtttcgg
cagctgaatttattaaaaagaaaattgactctgaaggagcttttgtttgacctgttcctt
cagccagaagacagccctgatgcagtgttccagtacctcctggaaaatgcctggcgtacg
ctgatcatctttgatgggctggatgagtttgcagctaacatggacatgtcagcctcttct
aagggaggcccaactcttacctcccgtatgtccatatctgagctctttttagacctctgt
catgggaaactcctgcctggttgcacagtgttggtcaccagccggcctaagagactacct
gacttcttattaaacacagtagatctgctagcagaaatttggggatttgaccatgagaag
gttgaggaatacgtcagccactattttcatcagcattcattcaaagaacaagccattgct
cacctgaagaacaacaccaagctcctcagcatgtgcctcatccctgctctgtgttatgtt
gtgtgcatctgtttggagtatttgctccttaaacatcagatgagtgtggagcttcctcag
accatgacacagttttatatcaaaatgcttctcatcttcataaacaaacagcagggagag
cacgcaggtggcgaggagactcagctgaactgtaacaggaaggccattttgggtctgtgt
gatcttgcactgaaaggcctggaagataagaagcttgtattttatgttggtgatattcca
gagcacgtgaaggaatttgcttccttacatggattgctgactgtctttgaggtgaagacg
agtggcacttgcccagaggctggctatgcctttgtgcacttgagcttgcaggagtttttt
gcagcactgtgtcttatggtaagtaagaaggtggacaagaactacctgaagaagaagttc
tctttgaagtcaaagtggactttaaagaatgaggcgaagaccgagttcatggagagtttt
cacatctttctctcaggcttgtcgtcaaaagaatgtaggacgtttctcatgctgctagct
gaacaagatgaagcttgggtgcaggataagcaggaggcaatcctgctgtctctcaagaaa
ctggcagccactcatctgacagggcctaaggtcattgagctctgccattgcacatttgaa
acgcaagacctcgaagtaacccagcatattgggagcctgctgaatttcaaatacgagttt
aaaaactttagactgacacctctggacatgtcagctttggtttttgtcataaactcgggc
cacgatttggctcatttggattttgcaggatgtcccatggacaatgactgtttggagatt
ctggccggctgtaaaaatgtagagcgcttgagctttcgtagcaggagatgtggcgatgac
tttgctgctgctctttcaaagagcttacgaggaatggggagcctgaagaaactagagttg
acaggcggaagcatcacagctgaggggatgactgacttggtccaggcttcatcacagtgc
ctccagcttgaggaaataaacttgcaggacaatcggatacgggatctggaggtgaagagg
gtgatggacctgttttccagaatggaaaagctgaagaaaatagatctgagcaacaacgat
ctttccttgaatgctgttctccttttggcaaaggaagtcatcgcgtgtcaaaatgctact
gaactgtgtgtcaggaaggacaccgtgattatatatttttctggcctgtctgggaaagtt
ccaagatctttggatttgaggtgtgacgagaataaggaacatgtaactccaactagattt
gtgaagttatgcttgcaagatcgcagcctgtcttcccaacatgcaaaggagatcgttgcc
attctccagagctgtccctgtctctccgaagtggatttatcaggtaacaagcttggagat
gaaggctgcggtcgcctgctggaaaacctcccttggatatcaatttcaaagcagctggat
ctcagtcaaaactgcctctctgttaatggcatttgcagtctgttgaagtcaataaatacc
tgccagaagatgatggaggtacaagtcagcctttgtcgggagactgcagtcctgaagttt
gcagaagacagagagtttgcttcccttcctcctagggaagagcctgtgttctctactggt
gaccaacaatatggagaggaaaaccagacacctactgccccccgaaaaataagactgaca
gacagtcgttttcaagccagtgacctggagaagctgtgtgcagtcctgaaggaatgtagc
agcatctccgagctggacctatcaaataattatctgggagacgagggacttctgcagctg
tttcagttcctcccgaatttgaaaatgttaagttctctcaagcttaatgacaaccagatc
tccctgaactctgtgtttttcttagctcagtccttatctacattggaacacattaaaaca
atgaacctcagcttaggacacacgcaggtggttcatctaaccttttgggaaagaatcagg
gtcagaagtaccagcagatggagaagcagtttcctggcgcatcccaagcatgaagcaaaa
ggacggtgctttcgtctcagggactgcagagtgggtccagaggacgtgaccaggctgtgc
cagatactggctcaatgtccccagctgacagaaattgatctgtctggaaattcattgagt
gaccagagcattgagagattactgagcttcctgccacacttctgtcatctgacactactg
agtgttaggaataacacattttccccacgttgcactgtcttactcatcaactccatcaac
ctctgtgagcggatcagaatggtagaagtccggtcaagtgaaaatgcttttttgcattta
ggagcacgcgtgcaaagccaaaggacatcctgcaggctgacggactgtgccatcggtcaa
gggcagatagatgagctctgcagagtcctggagcagcacgggtggnctgcagaagtagac
ctctccaggaatcagctgagagatgaaggcctgaggtgcctcttggaccacttgtgtcga
gtgcccgttacctgttccctcaatctcagccataatcggatttctcaggatggagttctg
catctcataaatgcctttgccacatctggaaatactactgaagttcaagtcagtttgtgc
tccaaagcaactttaatcatcaagttgacaagcagagatgacccgagaaagattttgaga
ctcgcagagtgcaactttcagccagagcacttggaaaagttgtgcttgctcctggaaaag
tgcactggtctgacagagtacatatcttcaaataacaacgtgaccgtccaagctgcagaa
agacttttgcattcactgaggaaaaatctgggtcccctgaaaatcagcatagaagagcca
tgggtatgtaaagaaagcgtcacaaaccttcttgagctagctgtccgggcctgtggaaac
attactgagatcacgatatgtaaagataaaaccctcttccaattaggcgtaaggttccca
cactgcctggagaaggtggaatcagtcgttagcagattgaatctgtacaagccagaaatc
aagcatgcttgcttctatcaaagggtttgtgaaaaatgtgctcagcttcaggaattgaga
tggtctcatgttgagctccacaacgatgaagcagaaatgctagtcaggattttgctacct
cttccagagctgaagaaatttgggctgacctctagcagtattatgccaactggaattgat
tacttgatcacgggcttgcagaattgccaggccattgaagagctcaacctgggctacatg
aaactcagcagtgctgacattcctaagcttgtgctgggacttcgtgaaatgccgtctctg
aaaaggcttatcttgaaccataacagtattggtaacgatggctgctccagacttgcagaa
gccttgaggaatatgcgctacatagaggaaatcaatttaagccacaacaagatcggagat
ccaggcctgataaatctagctgctgtcctgctggaaatgcaaaacctgaagagaatcgac
ctttcagggaacagccctagtcctgctggaggggaaaagctgatggaagctcttgcctat
tgcaagtgcatcgaggagttactactgtcaaggaacgtttttggagacaggacggcagtg
aaacttgccctctgtctgcctcacatgaccagcctcaggatcctgcacttgcagaacaat
aacattgggccagcaggagggatggagctggccagagccctggtggcgtgtgggctgcta
gaagagataagtttatcagaaaatgaccttggggaaggaagtatccatgccctgtccaag
gggctgccatgctttaaacacctccggaagatcgacttgaaactctgtggaatcactgat
gatgcttcaaaatcactttctcacggcttccgacaatgcccttccatggaggagataata
ctgtcttggaacacccttggtgacggaggagccggagagatggccactgctctcccaggg
atggaaaagctgaaggtgttagatctggagaaaaatcgcattggtgcctgcggagccacg
aagctagcagaggaacttgccaagtgcccggaaattcagttcgtaaggctgtgggacaat
ccagtgcccaagggcctcgctgagaatttgacaagccaagacccaagactgtgtttctcc
ttctactag
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