Gymnogyps californianus (California condor): 127020921
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Entry
127020921 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127020921
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gcl01007
]
127020921
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gcl03016
]
127020921
Enzymes [BR:
gcl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
127020921
Amino acid related enzymes [BR:
gcl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
127020921
Transfer RNA biogenesis [BR:
gcl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127020921
Prokaryotic type
127020921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
vRNAP_dom
Med11
STX6_10_61_N
Lipase_GDSL_3
DUF4404
DUF6127
Motif
Other DBs
NCBI-GeneID:
127020921
NCBI-ProteinID:
XP_050759699
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All DBs
Position
12:complement(22550221..22565359)
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AA seq
968 aa
AA seq
DB search
MEATLTASQIRQRFIDFFKENKHTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPS
HPLAKLNRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALD
LLTKEFGIPAERLYVTYFGGNEAAGLQPDLECKQIWLNLGLAEGRILPGNMKDNFWEMGD
TGPCGPCSEIHYDRIGDRDASHLVNQDDPNVLEIWNLVFIQFNREADGTLKPLPKKSIDT
GMGLERLVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYMGQVGAEDTDGIDMAYRVLAD
HARTITLALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKGFFATLVDVVVQSLGDA
FPELKKDPDMVKDIINEEEDQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGF
PADLTGLIAEEKGLVVDMEGFEEERKNAQLKSQGKGAGGXDLLMLDIYAIEELRARGLEV
TDDSPKYSYASDPSGTYDFGSLVATVKAIRREKKFVEEVSTGQECGIVLDRTCFYAEQGG
QIYDEGYMVKDDDGREDKTEFTVKNVQVRGGYVLHIGTLYGSLKVGDQVHLSIDETRRRP
VMSNHTATHILNFALRSVLGEADQRGSLVAPDRLRFDFTAKGALSTQEIKKVEXIANQMI
EEAKTVYAKDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLDDPSGPAGSITSV
EFCGGTHLQNSSHAGPFVIVSEEAIAKGIRRIVAVTGAEARKALRKVDSLRKLLSALEAK
VKVQTAPNKDVQKEITDLSEMLATAVIPQWQKDELREAVKALKKVMDDLDRASKADIQKR
VLEKTKQVIESHPNQPLVIMEMENGASAKALNESLKLFKTYSPQTATMLFTVDNEAGRIT
CLCQVPQETANKGLKASQWVQEVSGLMDGKGGGKDVSAQATGKNVGCLREALKLATDFAR
LRLGELKN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggaagctacgctaactgctagccagatccggcaaaggtttattgacttcttcaaggaa
aacaagcatacctatgtgcactcatcttctacaatccccctggatgaccccacgctgctc
tttgccaatgctggtatgaatcagttcaaacccatcttcctcaataccattgacccctcg
cacccgctcgctaaactgaacagagccaccaacactcagaagtgcatccgagcagggggc
aagcacaatgacctggacgacgtcgggaaagatgtctaccaccacaccttcttcgagatg
ttggggtcctggtcctttggggattatttcaaggaacttgcttgtaaactggcactggac
cttctcaccaaggagtttggcatccctgctgaaagactctacgtcacttactttggtgga
aatgaggctgcaggactgcaaccggacctggagtgcaagcagatatggttgaatttgggg
ctggctgaggggaggattctgcctggcaatatgaaggataacttctgggaaatgggagac
acgggcccctgtggcccttgcagtgagatccactatgaccggattggggacagagatgct
tctcacctggtcaatcaggatgaccccaacgtcctggagatctggaacctggtgttcata
cagttcaacagggaagctgatgggacactgaaacctcttcctaagaaaagtattgatact
gggatgggcctggagaggctggtctctgtgctgcagaacaagatgtccaactacgacact
gaccttttccttccttactttgaagccatccaaaagggcacgggtgccaggccgtacatg
gggcaggttggtgctgaggacaccgacggtatagacatggcctaccgcgtgctggctgac
catgcacggaccatcacgctggccctttctgacgggggcagacctgacaacactggcaga
gggtatgtgctgaggcggattctccgacgggctgtgcgctactcccatgagaaactcaat
gcccccaagggtttctttgctactctggttgatgtggtggtgcagtcactgggagatgcc
tttcctgagctgaagaaggacccagatatggtgaaggacattatcaatgaagaagaggat
cagttcctgaaaacactcagcagaggacgtcgcatcctggacaggaagatccagagcctg
ggggacagtaaaaccatccctggtgatactgcctggctgctgtatgacacctatggtttt
cctgcggatctcactgggctgattgcggaggagaagggccttgttgtggacatggagggc
tttgaagaagagcggaaaaatgcgcagctcaaatcccagggcaagggtgctggggggnag
gacctcctcatgctggacatttatgccatcgaagagctaagggcccgagggctggaggtg
actgacgactcgccaaaatacagctacgcttcagatccgagcggtacctacgattttggg
agcctcgtggccacagtgaaagccatccgcagggagaagaagtttgtggaggaggtatcc
acgggccaggagtgtgggatagtgctggaccggacctgcttctatgccgagcagggtggg
cagatctatgacgagggctacatggtcaaggacgacgacggcagggaggataaaacagaa
ttcacggtgaagaacgtgcaggtccgaggaggctacgtgcttcacataggaactctatat
ggaagcttgaaagtaggagatcaggtccacctgtctattgatgagactaggcggaggcca
gtcatgagcaaccacacggccacccatatcctcaacttcgccctgcgctcggtgttgggg
gaagctgaccagagagggtcgctggtcgcaccagacaggctgcggtttgacttcacggcc
aagggagccttgtctacccaggaaatcaagaaagttgaanggatcgccaaccagatgatt
gaggaggcaaagacggtgtacgccaaggactgccctctcgcagcagccaaagctatccaa
ggactgcgcgcagtttttgacgagacctaccccgatcctgtccgtgtggtctcgattggc
atccccgtggaggagctgctggatgacccctccggccccgcgggctccatcacttctgtt
gagttctgcggaggcacgcacttgcagaactccagccatgctggcccctttgtgattgtt
tcagaagaagcaattgctaaaggcatccggaggatagttgcagtcaccggggccgaagct
cggaaggccctcaggaaagtcgacagcctcaggaaactgctgtcagccctggaggccaag
gtgaaggtccagacggctcccaacaaggatgtgcagaaggagatcactgatctcagtgag
atgctggccactgctgttatcccacagtggcagaaggatgaactgagagaggctgttaaa
gcgctgaagaaagttatggatgacctggaccgagcaagcaaagccgacatccagaaacga
gtgctggagaagaccaagcaagtgattgagagtcaccctaaccagccgttggtcatcatg
gaaatggaaaatggagcctcagcaaaggccctgaacgaatctctgaagcttttcaagact
tactccccccagaccgccaccatgctcttcactgtagataacgaagctggcagaatcacg
tgcctgtgtcaggtaccccaggagaccgcaaataagggcctgaaggccagccagtgggtg
caggaggtgtctggcttgatggacggcaaaggcggtgggaaggacgtctcggcgcaggcg
acgggcaagaacgtgggctgcctgcgggaggccctgaagctggccacggactttgccagg
ctgcggctgggggagctgaagaactga
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