Gymnogyps californianus (California condor): 127020922
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Entry
127020922 CDS
T08687
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127020922
03036 Chromosome and associated proteins [BR:
gcl03036
]
127020922
Transcription factors [BR:
gcl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127020922
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127020922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
127020922
NCBI-ProteinID:
XP_050759700
LinkDB
All DBs
Position
12:complement(22621431..22658766)
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AA seq
750 aa
AA seq
DB search
MKRTNQSRQKCRSVKNINQEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDAC
HIPPNQADGGEVVQDVNSGVQMVMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCS
GLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAET
VEEEEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaaatcagtccaggcagaagtgcagaagcgtcaagaacataaatcaggaa
ggtgaaatggaaggtgaggcagtcgaagctattgtggaggaatcggaaacttttattaaa
gggaaagagagaaaaacctatcaaagacgccgtgaaggtgggcaggaggacgatgcttgt
catataccaccaaaccaagcagatggaggtgaagtagtgcaggatgtcaacagtggtgtg
cagatggtgatgatggaacagctggatccaactcttcttcaaatgaagactgaagtaatg
gaaggtgcggtgcctcaagaaacagaggctacagtggatgacacacagatcataacactt
caggttgttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaagta
cctgtaccagtgactgtacctgttgccaccacgtctgtggaagaacttcagggagcttat
gaaaatgaggtttccaaaggaggcctgcaagagggagagcccatgatctgtcacaccctc
cctttaccagaaggcttccaagtagtgaaagtgggtgcgaatggtgaggtggagacactg
gaacaaggtgaacttcagccacaggaagatcccaattggcaaaaagatccagactatcag
ccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggagggc
aaagatgtggatgtctcggtgtatgactttgaagaggagcagcaggagggtttgttgtct
gaggtcaatgcagaaaaggtggtgggcaatatgaagccacctaaaccaacaaaaattaaa
aagaaaggtgtaaagaagacattccagtgcgaactgtgcagttacacttgtccgcgtcgt
tccaacttggaccgccacatgaaaagccacactgatgaaagaccacataagtgccacctc
tgcggcagggctttccggacagtcacgttgctgaggaaccacctcaacactcacacaggt
actcgccctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggtt
cggcatcgccgctacaaacatacccatgagaaaccattcaaatgttcaatgtgtgattat
gctagtgtggaggttagcaaattgaaacgccacattcgttctcacactggagagcgtccg
ttccagtgcagcttgtgcagctatgccagcagggatacctacaaactgaagaggcacatg
aggacccactctggagagaagccatatgaatgttacatctgccatgctcgcttcactcag
agtggtaccatgaagatgcacattttgcagaagcacacggagaatgtggccaaatttcac
tgtcctcactgtgatactgttatagcgagaaagagcgacttgggtgtccatttgcgaaag
cagcattcctacattgaacagggcaagaagtgtcgctactgtgacgccgtgtttcatgag
cggtatgccctcatacagcatcaaaagtctcacaagaatgagaagcgcttcaagtgtgac
cagtgtgattatgcatgcagacaggagcggcacatggtcatgcataaacggacccatact
ggagaaaagccttatgcctgtagccattgtgataaaaccttccgtcagaaacagctcctc
gatatgcacttcaaacgatatcacgatcccaactttgttcctgctgcctttgtctgttcc
aagtgtggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctct
ggcctagatggtggggaaggagagaatggaggagagacaaagaagggcaaacgtggccga
aagagaaagatgcggtctaagaaagaagattcctccgatagtgaggaaaatgctgaacca
gatttggatgataatgaagatgaggaggagacagcagtagaaattgaggctgaaccagaa
gtcgagcaagaggctcctgcaccacctcccagtaagaaacgaagaggaagaccaccaggc
aaagctgccacccaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccag
aacactggtgaaattgaaaatattatagttgaagtaaagaaagaacctgatgcggaaaca
gtagaggaggaggaggaagctcagcctgctgtagtggaagctcccaatggagacctcact
cctgagatgattctcagcatgatggaccggtga
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