Gymnogyps californianus (California condor): 127020939
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Entry
127020939 CDS
T08687
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04115
p53 signaling pathway
gcl04120
Ubiquitin mediated proteolysis
gcl04137
Mitophagy - animal
gcl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127020939
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127020939
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127020939
09143 Cell growth and death
04115 p53 signaling pathway
127020939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127020939
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127020939
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127020939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
127020939
NCBI-ProteinID:
XP_050759733
LinkDB
All DBs
Position
12:complement(15294679..15372015)
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AA seq
313 aa
AA seq
DB search
MTGRSASSFLYSWKGVLCACLPGSKTNKGKEMSRQTATALPTGTSKCTPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacggggagatcggcctccagctttctgtattcgtggaagggagtcttgtgtgcatgc
ttgccgggaagtaaaaccaacaaggggaaagaaatgagccgtcagactgctacagcacta
cctacaggtacttcaaagtgtacgccatcacagagggtgcctgcactgactggcactaca
gcttccaataatgacttggctagtctctttgagtgtcctgtgtgttttgactatgtgctg
ccaccaattcttcagtgtcagagtggccatcttgtttgtagcaactgtcgccccaaactt
acgtgctgtccaacttgccgaggcccgctgggctccattcgtaacctggctatggagaaa
gttgccaattctgtactattcccatgtaaatatgcctcttccggatgtgagataactttg
ccacacacagaaaaagcagaccatgaggagctgtgtgagtttaggccttattcctgtcca
tgtcctggtgcttcatgtaaatggcaaggttctctggatgctgtaatgccacatctgatg
catcaacataagtcaattacaacacttcagggagaagatatagtgttccttgctacagac
attaatcttcctggtgctgttgactgggttatgatgcagtcttgttttggctttcatttc
atgttagtattggagaaacaggaaaaatatgatggtcaccagcagttctttgcaattgta
cagctgataggaacacgcaagcaagcagaaaactttgcttatcgacttgagttaaatggt
cataggcggcgattgacttgggaagcaactcctcgatctattcatgagggaattgcaaca
gccattatgaatagtgactgtctagtctttgacaccagcattgcacagctctttgcagaa
aatggcaatttaggcatcaatgtaactatatctatgtgttga
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