Gymnogyps californianus (California condor): 127020968
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Entry
127020968 CDS
T08687
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127020968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127020968
03041 Spliceosome [BR:
gcl03041
]
127020968
03036 Chromosome and associated proteins [BR:
gcl03036
]
127020968
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127020968
Spliceosome [BR:
gcl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
127020968
Complex B
127020968
Complex C
U2 SnRNP specific factors
127020968
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
127020968
TFTC complex
127020968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
127020968
NCBI-ProteinID:
XP_050759808
LinkDB
All DBs
Position
12:21800945..21831904
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacctgacgttgcagcgtgccacaggcattagctatgctatccatggc
aatttttcaggaaccaaacaacaagaaatcgtcgtttcccggggcaagatcctggagttg
ctccgccccgatcccaacacagggaaggttcacaccctgctgaccgtggaagtgtttgga
gtcattcgctccctcatggcctttaggctgacgggtgggaccaaagactatatcgtcgtg
ggcagcgattcgggacgcattgttattctggagtaccagccctcaaagaacgtgtttgag
aagattcatcaggaaacctttggcaagagtggatgtcgccgaatcgttccaggccagtac
ttggctgtagacccaaagggccgtgccgtgatgatcagtgctattgaaaagcagaagctg
gtgtatatcttgaacagagatgctgctgctcgtctcaccatttcctccccgctggaagcc
cacaaggccaataccttggtctaccacgtggtgggagtcgatgtgggatttgaaaacccg
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggagaagca
gcagccaacacacaacaaacattgacattttatgaactggacttgggtttgaaccacgtt
gttaggaaatacagtgagcccttggaagagcacggcaacttccttataacagttcctggt
ggttctgatggacctagcggggtgctgatctgttctgaaaactatattacttataaaaac
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagaggggtatgatttttgtctgctctgctacacataagaccaagtccatgttcttc
ttcttggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcgactgaagtactttgacactgttcctgtcgctgctgccatgtgt
gtgctgaaaacggggtttctcttcgtggcatctgaatttggaaaccattacctgtaccag
atagctcacctgggtgacgatgatgaggagccagagttctcttctgccatgcctcttgag
gaaggagatacgttcttttttcagccacgacctctcaagaacttggtgctggtggatgag
ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca
ccccagttgtatgtggcttgtggtcgggggccccggtcatctctgagggttctaagacat
ggacttgaggtatctgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg
actgtgaggagacatgttgaagatgaatttgatgcctatatcattgtgtccttcgtaaat
gccacgctggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg
ggtactacgcccaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat
ccagatgggatccggcacatccgagcagataagagagtaaacgaatggaagacaccaggg
aagaaaaccattgtaaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacggagaga
aaggagatgtcggccgacgttgtttgcatgagcctggccaatgttccccctggggagcag
cgttcccggttccttgctgttgggctggtggacaacactgtcagaattatttcccttgac
ccttcagattgcttacagccactgagtatgcaggcccttcctgcacagcctgagtcgctg
tgtattgtggagatgggtggcacagagaagcaggacgagctaggggagaggggctccatt
ggctttctgtacctgaacattggactgcagaatggtgtgctgctgcgaactgtcctggat
cctgttactggcgatctttccgataccaggaccagataccttggctcacggcccgtgaaa
ctcttccgagtccgaatgcaaggccaagaggcggtgctggccatgtcaagccgttcctgg
ctcagttactcctatcagtcgcgcttccacctgactcctctgtcttacgagacactggag
tttgcatctggttttgcttctgagcagtgcccagagggcattgtagccatctccacaaac
acgttgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttcccg
ttgcagtacacaccccgaaaatttgtcattcacccagagagcaacaacctgatcatcatt
gagacagaccacaacgcttacactgaggccaccaaggcacagaggaagcagcaaatggcc
gaggaaatggtggaggcagcgggtgaagatgagagggagctggctgcagagatggctgca
gcctttctgaatgagaatcttcccgagtccatctttggtgctcccaaggcagggaatgga
cagtgggcctctgttatcagagtgatgaaccccatccagggaaatacgttagatctggtc
cagctagagcagaacgaagctgccttcagcgtggctgtgtgccggttctccaatactggt
gatgagtggtacgtgctggtgggagtcgccaaggacctgattctgaacccacgctcggtt
gctgggggatttgtctacacgtacaagctggtgaatagtggtgagaagctggagtttctg
cacaagacccctgtggaggaggttcctgcagccattgctccgttccaaggtagagtctta
attggagttggaaagctgttgcgtgtgtatgacctgggcaagaagaaactgcttcggaag
tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg
attgtttcagacgttcaggagagtttcatctgggtgcgctacaaaaggaatgagaaccag
cttatcatctttgctgatgacacttatccccggtgggtcactacggcaactctcctggat
tatgacactgtggctggagcagacaagtttggcaacatctgcgtggtgagattgcctccc
aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacaggggg
cttcttaatggagcgtcgcagaaggctgaagtgattatgaactatcacgtgggagagacg
gtgctttccttacagaagacgacgctgatcccaggaggctctgaatctcttgtctatacc
accttatcgggggggataggaatcttggtcccttttacttcccacgaggatcacgacttc
ttccagcacgtggaaatgcacttgaggtctgagcaccctcctctctgcggacgggaccat
ctcagtttccgctcctactacttcccggtgaagaatgtgatcgatggggacctgtgtgag
cagttcaactccatggagcctaacaaacagaagaatgtggccgaagagctggaccggacc
ccacccgaggtgtccaagaagctggaagacatccgcacgcgctacgctttctga
DBGET
integrated database retrieval system
