Gymnogyps californianus (California condor): 127020995
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Entry
127020995 CDS
T08687
Name
(RefSeq) terminal nucleotidyltransferase 4B isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127020995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127020995
03016 Transfer RNA biogenesis [BR:
gcl03016
]
127020995
Enzymes [BR:
gcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
127020995
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
127020995
Transfer RNA biogenesis [BR:
gcl03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
127020995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
127020995
NCBI-ProteinID:
XP_050759851
LinkDB
All DBs
Position
12:16188844..16231696
Genome browser
AA seq
682 aa
AA seq
DB search
MDPRIAWFQPEQLGPSNRLWMQIWETTQGVRNLYFQQQQQQEQQQQQSAPAGAGPASPPG
MYRAPRADPQPDFLPLESANNQHNRSHHQASPPPGAAAWARPARGGPPAAAAAAAASNKR
KRDNKASTFGLNYSLLLGPPGQGRAPALGDEPASRAQAGLAEPLYTGTPWKKRNYSQGVV
GLHEEIIDFYKYMSPRPEEERMRMEVVNRIENVIKELWPNADVQIFGSFKTGLYLPTSDI
DLVVFGKWETLPLWTLEEALRKHNVADENSVKVLDKATVPIIKLTDSFTEVKVDISFNVQ
NGVKAAQLIKDFIKKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHP
REDACMPNANYGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSMLDGYRPSML
YIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIRVT
QEVATYRDWISKQWGMQSRTESSCNGNGVTLIVDTQQLDKCNNNLTEENEALGKPRNKTS
ETLSKHSSNSSSGPLSSSSSTLSSSSDVDSDGTPCKTSKQLSCRQSTTNRVGSQEVSLES
SQSSGKTQNSQTANTSSNTNKSQHGSARLFRSSNKGFQGPTNSSHGTSVTNKQHQGSKSH
HQFFHGKKRKHKRDVTLSDLCR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatccccggatcgcctggttccagccagagcagctcggcccctcgaaccgcctgtgg
atgcagatctgggagaccacgcagggggtccgcaacctctacttccagcagcagcagcag
caggagcagcagcagcagcagagcgcccctgccggggccggcccggcctccccgcccggc
atgtaccgcgccccccgcgccgacccccagcccgacttcctgccgcttgagagcgccaac
aaccagcacaaccgcagccaccaccaggcctcgccgcccccgggggccgccgcctgggcc
cggcccgcacggggggggccgcccgccgccgccgccgccgcggccgccagcaacaagagg
aagcgcgacaacaaggccagcaccttcgggctcaactacagcctcctgctgggccccccc
gggcagggccgggcccccgccctgggggacgagccagcctcccgggcccaggccggcctg
gccgagccgctctacaccggcaccccctggaagaagaggaactacagccagggagtcgtg
ggtcttcatgaagaaatcattgacttttataagtatatgtctcccagacctgaagaagag
agaatgcggatggaagtggtgaacaggatagaaaacgttataaaagagctctggcctaat
gcagatgtccagatatttggaagttttaaaactggtttatatttacctacaagtgatatt
gatttagttgtgtttggaaaatgggagacattacctctttggaccctggaagaagctctt
agaaagcacaatgtagcagatgaaaactcagtaaaggttttagataaagcaactgtaccc
attattaaactgacagattccttcactgaagtaaaagttgatataagctttaatgtacag
aacggggttaaagcagcccagctcatcaaagattttatcaagaaatatcctgtattaccg
tatctcgttttagtattgaaacagttcctgttgcagagggaccttaatgaagtatttaca
ggtggaattggttcttacagtctttttttaatggctgtcagtttccttcagctgcatccc
agggaagatgcctgtatgcccaatgccaactacggtgttcttttaatagagttttttgag
ttatatggacgtcacttcaattatctgaagactggaatccgaataaaggatggtggctct
tatgttgccaaggatgaagtgcaaaaaagcatgctggatggctacagaccatcaatgctg
tatatcgaagatccgttacagccaggtaatgatgttgggaggagttcctatggtgccatg
caagtgaaacaggcttttgattatgcctatgttgttttgagccatgcggtttccccaata
gctaaatattatcctaacaacgaaacggaaagtatattaggtagaataattagagtaacg
caagaagtggccacgtacagagactggatatcaaagcagtggggaatgcaaagtaggaca
gagtcgtcgtgtaatggtaatggagtaaccttgatagtagatactcagcagctagacaaa
tgcaacaataatcttactgaagagaatgaagcactgggaaaacctagaaataaaacttca
gaaacacttagtaaacattcttcaaattcttcatcaggtcctttatcgtcatcatcgtct
acgctgtccagctctagtgatgtagattctgatggaacaccttgcaaaacctctaaacaa
ttgagttgtcgtcagtctaccacaaacagagtggggtcacaagaagtgtcactggaatcc
tcccagtcaagtgggaaaacacaaaatagccaaacagccaatacatccagcaacacgaac
aaatctcagcatggatctgcacggttatttcgctcttctaacaaaggcttccaaggtcca
acaaactcaagccacggtacctcagtcacaaacaaacaacatcaaggcagcaaatcacac
catcagtttttccacggcaaaaagaggaaacacaagagggatgtgaccctttcagacctt
tgtagatag
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