Gymnogyps californianus (California condor): 127021061
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Entry
127021061 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127021061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127021061
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127021061
mRNA degradation factors
5'-3' decay
Decapping complex
127021061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
WDR55
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
127021061
NCBI-ProteinID:
XP_050759943
LinkDB
All DBs
Position
12:complement(22857164..22895356)
Genome browser
AA seq
1408 aa
AA seq
DB search
MASSSSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSL
AKPVHRSISLGALQEKQVICLSGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDNTPLNTSRRIIWCPFI
PDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMSASMPSHGSH
EEFAFPDHMADLSTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAF
MTPSTSLQQVTREQHXSSIGASISPCSSVSSLTAVTAMSSTSVTDASMPRPSEDLTVSPK
MQLDASLTLSSSSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNPSLALELQEVEPLV
VPQASPTRERSPDVISSASTAMSQDIPEIASETLQRSFAAAPSGLPAEVLESSHHADSMA
SAASALHLLSPRNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWP
AAPDITRETRNSMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLA
STSGGFGAKASTQRLPVKDWKXQGIPRASPKLKRKGKKDDGYAGLARIQVAVGPDELMCI
LRNQQRELSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQ
QRNGQLQEHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPITGQLSNTIAAK
LTAVEGTLKESITKLVKSKNLTDTVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSM
FQQINDTFKQGTQEYIQQLETHLKNKKVREQEARDPLLNQLRQLISTFQSTTEQLASTVA
ASVHAEVQHQLHIIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTP
IPSAHLDFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPL
SQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFL
QVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctccagcatcgacatcgaggacgcgacccagcacctgcgggacatcctc
aagctggaccggccgggaggttcagtgaatgagaaccagagaccgtcaaattcgtataat
ggagacctgaatggactgctggtgcctgatcccatcgtggccggagatggaccttctttg
gctaagccagtgcatcgcagcatttctttgggagccctgcaggagaagcaagtcatctgc
ctttccggtgatgacagctccacttgcgtagtgatatcggcaaaagatgtggagatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacag
cctgttgccagatatgactgggagcagaaatactattatggcaatctgatagctgtttca
aactcttacctggcttatgccattagagctgccagtaatggctccgctatggtgcgggtg
ttgagcgtcagcactgctgagcggaccttgctgaaaggattcacaggcggtgtggcagac
ctggcttttgctcatctcaactccaaccagctggcgtgcctggatgaggctggcaacctt
tttgtctggcgcctggccatggataaagaaaaaatccaagaggagatcttggttaacatc
aagcgacctgacaacaccccgttgaacacctctagaagaatcatctggtgtcctttcatc
ccggatgataatgaggagagtggtgaagagggaagtcagacgttggcgttgttgcatgag
gacagggcagaggtgtgggatttggacattatccgaacgaacaacagctcctggccggtg
gaagtgcctagcatcaaagaaggcttcatcgtagtgaaaggccacagcacgtgcctgagc
gagggagcactttctccagatggaactgtgttggccacagcaagccatgatggttttgtc
aaattctggcagatctatattgaggggcaagatgagccaaggtgtcttcatgagtggaaa
ccccatgatggtaggcctctttcctgcctgctcttttgtgacaaccataaaaaacaagac
ccagaagttcccttctggagatttctcatcacaggagcagatcagaacagagaactgaag
atgtggtgcactgtgtcctggacctgtctgcaaactgtccgcttttctcctgacatcttc
agctccatgagtattcttcccagcctgaaagtctgcctggacctctccgctgaatatctg
atactgagcgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagag
gagggtaaagcttacttcagctccatctcggagttcctccttacccacccagtcctaagc
tttggcatccaggcagtgagccgctgtcggttaaggcacactgaagtgctcccggccgaa
gaggaaaatgacaacttgagtgtagaaggtgctcagggagctggggctgttgaatcagca
gcaggcgtgctgataaaactcttctgtgtgcacaccaaggccctgcaggatgtgcagatt
agattccagcctcttcatagccctgacatgagcgcatccatgccttcccatggctctcat
gaagaatttgcctttccagaccacatggctgatctgagcacagaagggctgggatccgaa
aaaggatcggtgcatggctctcaaccagacctgcggcgtattgctgatctgcctgtacca
gcagacttcctttctctctccaatgatgccaaacctaagctgatgactccagatgcattc
atgacaccaagtacatctcttcaacaggtaaccagagagcagcactgaagcagcattggg
gccagcatatctccctgcagcagcgtcagttccctgactgcagtcacagccatgagtagc
acttctgtcacagatgcctctatgcccaggccatcggaagacttgactgtgagccccaag
atgcagctggatgccagcctcacgctgagtagcagtagcagcagtcttcagactagtcct
aggagccattcagttcttatcccgggcctgcctgacaagttaacaccaaaggcacctgtt
ccagtcacgccaggaaacccctctctagcactggaactgcaggaggtggagcccttggtg
gtgccccaggcttctcccacccgcgagcgctcgccagacgtcatttcctctgcttccaca
gccatgtcccaagatatcccagagatcgcttccgagaccttgcaacgcagcttcgcggca
gctccgtctgggctccctgcggaggtgctggagtccagtcatcacgcagacagtatggca
tccgctgcctcagccttgcatttgctgtctccaaggaaccggcacaattcagagcacagc
caccactctttggacatgcctccagtggaggtggacagactgaatgctccgtcgttactg
gagactgctttaactcaggaaaacgcatcttctgacagtgttgtgagtcagccgtggcca
gcagctcctgacataaccagagaaaccaggaacagcatggcagacagcccaagggatgag
gttgaagaaaagcacaagagctcttcctatcatcgacacagctaccacctgctgcagcat
gacagccaggatgctagtgcagaacaaagtgaccatgatgatgaagttgcaagcttggct
tctacgtcgggtggatttggtgccaaagcgtctacgcagaggctgcctgtgaaggactgg
aaangccaaggcatcccccgggcttccccaaagctaaagcggaagggcaagaaagatgac
gggtacgctgggcttgccagaatacaggtggctgtgggaccagatgagctgatgtgcata
ttgaggaaccaacagcgggagctctctgagctgcggcagaaccagatggagctgctgcag
agactcacggatcaccttgatgccattcagagctcccttatgggccacgtggagagggtg
attgactcccagcaggagcaggagcagagaagactagaccgagcgctgacggaaggacag
cagcgcaacgggcagctccaggagcatctgtctcagcagctctctcagtccctttccact
gctgtgtgtaaccgtctggagaggaccattcgcgaggagatgaagaagaccgtaccccag
tgcatttccaagagcatggaccctatcactggccagctaagtaacactattgctgccaag
ctcactgctgttgaggggacgctgaaggagagtatcaccaagctagtgaaatcaaagaac
cttacagatactgtcgtgagggcaacggccgataccctgcaggggccgatccagtcagct
tacagggaagcatttcagagcgttgtgttgccagccttcgagaagagctgccagtccatg
ttccagcaaatcaatgacaccttcaagcagggcacacaggaatatatccagcagcttgag
actcacttgaagaacaagaaggtacgagaacaggaggcccgggacccgctgctgaatcag
cttcgacagcttatcagcaccttccagagcaccaccgagcagctggcttccactgtcgca
gccagcgtccacgctgaggtgcagcatcagctgcatattatcgtgggcaacatgcaggag
tctattttggcccaagtgcagagagtcattaaaggagaagtgagcctggctatgaaggag
cagcaggcagctgtcacctcgagcatcgtccaggcgatgcgctcggcggccgggactcca
atcccctctgctcacttggatttccaatctcaacaaactcacatccttcagctgctccag
cagggacacctcaaccaagctttccagcaggctctaacagcggctgatctcaacctggtt
ctgtatgtctgtgagactgtggatactcagcaagtatttggacagcatccgtgcccgctg
tcccagcctgtgctgctctctctcattcagcagctctcctcagatttgggtactcgtacg
gaactgaagttgaattacttggaggaagcggtgatgcacctggaccacagtgaccccatc
acccgagaccacatggggtcagtcatgaaccaagtgcgacagaagctcttccagttcctc
caggtggaaccccacaacacgctgagcaaacctgcccgtcgcctcatgatcatgctccag
ggcctggtcacccctggcatgacctag
DBGET
integrated database retrieval system
