Gymnogyps californianus (California condor): 127021136
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Entry
127021136 CDS
T08687
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03018
RNA degradation
gcl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127021136
09123 Folding, sorting and degradation
03018 RNA degradation
127021136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127021136
03041 Spliceosome [BR:
gcl03041
]
127021136
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127021136
mRNA degradation factors
5'-3' decay
Lsm complex
127021136
Spliceosome [BR:
gcl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127021136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
127021136
NCBI-ProteinID:
XP_050760029
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Position
1:191757338..191763746
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgctttggagaattacatcaaccgtactgttgcagtaattacttctgatgga
agaatgattgtgggaaccctcaaaggttttgatcagaccattaacttgattttggatgaa
agccatgaacgagtgttcagttcttcacaaggagttgagcaagtagtgctgggattatac
attgtaagaggtgataatgttgctgtcattggtgaaattgatgaagagacagattcagct
cttgatttggggaatattcgagcagaacctttaaactcagtggtgcattga
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