Gymnogyps californianus (California condor): 127021205
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Entry
127021205 CDS
T08687
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gcl03036
]
127021205
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
127021205
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127021205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
127021205
NCBI-ProteinID:
XP_050760128
LinkDB
All DBs
Position
12:complement(12144985..12183506)
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AA seq
1271 aa
AA seq
DB search
MVSVIVIYRLPQIEDPGCFWVTMKGCGPYIVDEIEYKNLNAEMNQFYDKSYKDVDEVKPL
IVEEGQICVVFSEELKCWCRAVIKSIMYCTDHYQTECFLVDYAKYIFVKSKDIRVALEAF
MQIPYRAKKCRLYRTKPVTLRINFCEDTAKIVPAKRWDSAATRYFQNLLKATTQMKAKLC
AVEGNTFDVFLYVTIKDEKVCVNDDLVSKNFARFEEAKENTGNSADYQENQTSLNVESLP
VKIVNTALAFRPVLFQEKVSTNLETGLGISSSFFEETYQRSSTDLNENTASIVRGIPGLP
FKENTAVHTDRLQQFLNSDPLKTHIIEDDQQSFQNLSEERNFVFLSDKIEPSSVLETAPL
FDHLKKELIRKKFLGPNFTESYCWPPVARGCDVVAISYQGNDPFLYIPPVLTFLQSGSCY
KALPNRNGPIALILCPGWKKAQLVFELLKTYERCSRQLHPMLIILGQNKEEARSVKIRGC
EVIVTTPYSLLRLFEHHSLLFCRLCHLVLDEIDVLFSDTTEQVFTVLDCYKKTIITEEWE
YSPHQIIAVGTHWNKHIAHLIKEFMNDPYIVITAMEEASIYGNVQQVVQPCMNSERTAVL
LKILDFTCSNLQKVLVFTNSVNEAEMVHKALKSNSIFSLKIHKESEFNFKYILEQWTKKY
SSGTHVVLVLTDDCMQSLGITDATCVIHFSFPSPRIFGQRLHSMSDNFCNTIKNSSVDQE
YTKARSVILLTENSACHALGILRYLQHAEAEIPPELHDLTAKMLENEEDKKFSRPLCAYL
KTFGICKNRTVCPDRHQINLQIDVPQNIPDKIIQTPGCVTILPLHIVNATNYFGRIVDKQ
KDQYTILAEEINEYFKKPSNTISVKNVEKLAFYGLCEKTLFHRVQVVEISPKEDENLFFN
VKIKYIDEGRTSQVPSHQLLHLPAKFQCLPPQAVEFVVCRVKPIDNEIEWNPKVTHYIHH
KIKGKLHEAKIVHTLGNTAWVDPMVRVTRLSDLKMSVNEYNVRSEILSTGLGTDNPEHIT
QLQKLCGHMKVLDHAKNLEPLSIKEDTAGPENASNPQNMSIQESSTENCNSSKITFGNHP
CDGVAQTKEAEDSTLHQRKCFYPEIKWFQNEDTVTVTVKTASLADCKCEFSKEKVVFSAC
SGDKLYLADMELHQYILAEKSTCVIKDKETIIVLAKEKKGAWCKLLKNKNPHVSFDFEHW
EDFEDKSPFPVGTKKLYCTAAVTEELVDSSEDSGTESDEKNILACWGLLFQETLGCLYLK
IGRTTVLIRLH
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgttattgttatctaccgcttgccccagattgaagatccgggttgcttttgg
gttactatgaaaggatgtggaccttacatagttgatgaaatagaatataaaaacctgaat
gctgaaatgaatcagttctatgacaaatcttacaaagacgtggatgaagtaaaaccgcta
atagtagaagaaggccagatttgtgtggttttcagtgaggaactcaaatgctggtgtaga
gcggttattaagtcaatcatgtactgtacagatcattatcaaacagaatgctttcttgtg
gattatgccaaatacatttttgttaaatcaaaggacattcgagttgcactggaagcattt
atgcagatcccgtatagagcaaaaaagtgtagactgtatcgcacaaagccagtgacgttg
cgtatcaacttttgtgaagatactgcaaaaatagtaccagctaaaagatgggatagtgct
gctactcggtattttcaaaaccttctcaaagcaactacccaaatgaaagccaagttatgt
gctgtagaaggtaacacatttgatgtttttctttatgtgacaataaaagatgaaaaggta
tgtgttaatgatgatctcgtctcaaagaactttgctcgttttgaggaagctaaagagaat
acagggaattctgcagattatcaggagaaccagacatcattaaatgttgagtctcttcca
gtgaaaattgttaatactgcgcttgctttcaggccagtgctgtttcaggagaaggtatca
acaaatcttgaaacaggccttggtatttccagttccttttttgaagagacataccaaagg
tcaagcacagatctaaatgaaaatactgcatctattgtcagaggaattccaggtttgcct
ttcaaggaaaatacagcagttcacacagacaggcttcagcagttcttaaattctgatcct
ctgaagacacacataattgaagatgatcaacagagttttcaaaatcttagtgaagaaaga
aactttgtctttcttagcgacaaaattgagccatcgtcagttctggaaacagcaccactt
tttgatcatctgaaaaaggaacttattcggaaaaaatttttaggccctaacttcacagaa
tcttactgttggccaccagtagctcgaggatgtgatgtggttgccatctcatatcaggga
aatgatcctttcttatatattccaccagttcttacttttttgcagtcaggaagttgctac
aaagccttgccaaacaggaatggaccgatagcacttattttatgtcctgggtggaagaag
gcacaacttgtttttgagctactgaaaacatatgagagatgctccagacagcttcatcca
atgttgataatacttgggcagaacaaagaagaagctagaagcgtgaaaatccgaggatgt
gaagtaattgtgactacaccatatagcctcctgagactgtttgaacatcacagtttatta
ttttgtagactttgccatcttgttcttgatgagattgacgtactgttctctgacactact
gaacaggtttttactgtattagattgttacaagaaaaccattattactgaagagtgggag
tattcaccgcatcagatcattgctgttggaactcattggaataaacatatagcacacttg
ataaaggagttcatgaatgatccttacattgtgataacagctatggaagaagcttccatc
tatggaaatgtgcaacaggttgtgcaaccttgcatgaacagtgagagaactgctgtgtta
ctcaaaatactggattttacctgcagtaatcttcagaaggtgctggtattcactaattca
gtaaatgaagcagaaatggttcataaggcactgaagagcaactcaatattttccttgaaa
atacataaagagagtgagtttaatttcaaatatatcttagagcagtggacaaaaaagtat
agttctggcactcatgttgtgttagttttaacagatgactgcatgcagtctttgggaatt
acagatgcaacttgcgtgatacatttcagctttccttctccaagaatatttggtcagcgt
ctacacagcatgtctgacaacttctgtaatacgataaagaattcttctgtagatcaggaa
tatacaaaggcaaggtcagtcattctgctaacagaaaacagtgcatgtcatgcacttggg
atcctgcgctatttgcagcacgcagaagctgaaattccgccagaactgcatgatcttact
gccaagatgctagaaaatgaagaagataagaaattttcaaggccactgtgtgcctatctt
aaaacattcgggatttgcaagaatagaacagtgtgtccagatcgtcatcaaattaattta
caaatagacgtgccccagaatataccagataaaattatacaaacgcctggatgtgtgaca
atactgcctctccacattgtaaatgcaacaaactactttggtcgaatagtagataaacaa
aaggaccaatatacaattcttgctgaagaaattaatgaatattttaagaaacctagtaat
acaatttctgttaaaaacgtggagaagctagcgttttatggattatgtgagaaaacactt
tttcacagggttcaggtggtagagatttccccaaaagaggatgaaaatttgttctttaac
gtcaaaattaaatatatagatgaaggcagaacaagtcaagttccgagccatcagctgctt
cacttacctgcaaagtttcagtgtctgccgccacaggctgtggaatttgtagtttgtaga
gtgaaacccattgataatgaaattgaatggaacccaaaggtaactcattatattcatcac
aaaattaaaggaaaactacatgaagcaaaaatagtacataccttgggaaatacagcttgg
gttgacccaatggtccgggttactagactttcagatttgaagatgtcggtcaatgaatac
aacgttcgatctgagattttgtctacgggtctgggaactgacaatccagaacatataaca
caacttcagaagctgtgtggacacatgaaggtattagatcatgcaaagaacttggagcca
ttaagcataaaggaggatacagctggtccagagaatgcgtccaatccacagaatatgtca
atacaagaaagttctactgaaaactgtaattcttctaaaattacttttgggaatcatcca
tgtgatggtgtagctcagactaaagaagcagaagactctaccctgcatcaacgtaaatgc
ttttatccagaaataaagtggtttcaaaatgaagacactgttacggtgacggtaaaaaca
gcaagtctagctgactgtaaatgtgagttctctaaagagaaggtggttttcagtgcttgt
tcaggagacaaactttatttggcggacatggagctgcatcagtatatacttgcagaaaag
tctacatgtgtgattaaggataaagagactattattgttctcgcaaaagagaaaaaagga
gcatggtgcaaattactgaagaacaagaatcctcacgtgtcttttgattttgaacactgg
gaagattttgaagataaaagcccttttccagttggtactaaaaaattgtattgcactgct
gcagtaaccgaagaattggttgactcctcagaagacagtggaacagaaagtgatgagaag
aatatactcgcttgttggggattactctttcaagaaacattgggatgcctttacttgaag
attgggagaacaactgtattaatacgtttacactga
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