Gymnogyps californianus (California condor): 127021328
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Entry
127021328 CDS
T08687
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
127021328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gcl04040
]
127021328
Ion channels [BR:
gcl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127021328
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
127021328
NCBI-ProteinID:
XP_050760273
LinkDB
All DBs
Position
12:complement(23544850..23575098)
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AA seq
1310 aa
AA seq
DB search
MLGWIERVVPQPPAPRLTGETPPAPVRDPEPAKVPMGKAGGPGDAAERARAAIEEMEKKV
GFVIPEDPGSVFESVGSSVLSWLSQGLEKVIPQPVPAPGTLQALGKSFETSIDVPDQTEV
QILRDEEEDALEITPFDPEEDELDGCESEAGSDTGTEEWAGARVLSWLVQGFERMVPQPE
MLKKLELETKEQKCEAAAGGTKGTKTWAKSKSSVSAAQSIPVAAEPAAAEGQPEPVATLM
PRSLAGDGSRVFAWLVQGLEKVMPQPVTREKQDTQAVATATLSPVEETLISRSVLELCRT
MFAKLVGFDQRITREFKPAAFITPFDMFAAELEGVCQAWFHIVLGEPEETNLVLEEVDDD
WINEATCEMMAWGREAELVADAHPLPPIQEEPQEEENRLWLCSLSAAEEEEEEEEEKEEE
GEEEEEEKKEEAAEDSAGPLLRSPCLTADEGVDEVYFAEEALRFEQLEEAEISDLEGAFL
QEVMGCKPKAGVVNPNFCNEEQSPLGNYPTVDIKDADSGGDAVENDGTHLPVPTAGAPNM
LVVPSAAPASPRGKVTLVGEVETDETWEEEEEEEGEELAEDGGQAEQDKLSLGHCACVRR
RKLPAPENGLDEGLASQLPTRALLGWDEEQREGLPERIGSATSLSSAVINNRLQELVKLF
KERTEKVKEKLTDPDVSSDDESPAASPTKRAPAAAPVPPPGGEPEGDKPAGDEHYCEMLC
CTFKYRPWLDRLKNYQFPTSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAFPYQTPAN
IHCWLLVDYLCDLVYLLDILIFQTRLQFVRGGDIITDQKAMKENYLRSQRFKMDVVCLLP
LDFFYFKVGVNPLLRFPRCLKYMAFFEFNNRLEAILSKAYIYRVIRTTAYLLYSLHVNSC
LYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYFT
GVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPKTVQNRVKTWYEYTWHS
QGMLDESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPND
YVCKKGEIGREMYIIQAGQVQVLGGPDGKTVLVTLKAGSVFGEISLLAAGGGNRRTANVV
AHGFANLFILDKKDLNEILVHYPESQKLLRKKAKKMLKNNNKPKDEKGAPGNPLIIPPKA
DTPKLFQAALAATGRMGGKGPLAQLRWRLKELKAMQATQGSSFSPIPPKSPVHQRSPVTS
HKARTRPGEEIFSKSSDSLVTTRVISTAQEDEEILAAEILEKEEEEKEEK
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctggatcgagcgggtggttccccagcccccggcaccccgtctgacgggagag
acccctccggccccggtgcgggacccggagccagctaaggtcccaatgggaaaggccggt
ggccccggggatgctgctgagcgtgcacgtgctgccattgaagaaatggaaaagaaggtg
ggatttgtgatccccgaggacccaggctctgtgtttgagagtgtggggagcagtgtgctc
tcctggctctcccaggggctggagaaggtgattccccagccggtcccagccccagggacg
ctgcaggcactcgggaagagcttcgagacaagcatcgatgttcccgatcagacggaggtc
cagatcctcagggacgaggaagaggatgctctggagataacccccttcgatccggaggag
gacgagctggatggctgcgagtctgaggccggctcagatactggcacggaggagtgggca
ggagcacgggtgctcagctggctggtgcagggcttcgagaggatggtgccgcagccagag
atgctgaaaaagctggagctggagacgaaggagcagaagtgcgaagccgcggcgggaggc
acaaaaggaactaaaacctgggcaaagtcaaaaagcagcgtttcagccgcccagagtatc
ccggtagcagcggagccagcagcggccgaggggcagccagagccggtggccaccctcatg
cctcggtccctggctggggacggcagcagggtgtttgcctggttggtccaggggctggag
aaggtgatgccgcagccggtgaccagggagaagcaggacacacaggcagtggccacagca
accttgagtcccgtggaagaaacgctgatatcaaggtccgtcctcgagctgtgccggacg
atgtttgccaagctggtgggatttgatcaaagaattacaagggaattcaaacctgctgcc
ttcatcaccccctttgacatgtttgctgctgagctggagggtgtttgccaagcctggttt
catattgtccttggggaacccgaggagaccaaccttgtcctggaagaggttgatgacgac
tggattaatgaagccacgtgcgagatgatggcctggggtcgcgaggctgagctggtggca
gatgctcatccccttcctcccatacaggaggaacctcaggaagaagaaaacaggctgtgg
ttgtgctccctgagcgctgccgaggaggaggaggaggaggaagaggaaaaggaggaggag
ggggaggaagaggaggaggagaagaaggaggaggcggcggaggacagtgccggacccctg
ctccggtcaccttgtctcaccgctgatgagggtgtggatgaagtctactttgcagaggag
gccctcaggtttgagcagctggaagaagctgagataagtgatctcgaaggtgcttttcta
caggaggtaatgggttgcaagccaaaggctggagttgtcaaccctaatttttgcaatgag
gagcaatcccccctaggcaattaccccaccgtggacatcaaggatgcggacagcggaggc
gatgctgtggagaacgacggtacccacttaccggtgcccaccgccggtgctcccaacatg
ctggtggtgcccagcgcggcgccggcatcccccagaggaaaagtgaccctggtaggagaa
gtggaaacagatgagacctgggaagaggaagaggaggaggagggagaggagctggctgaa
gatgggggacaagccgagcaggacaagctgagcctcggtcactgtgcttgtgtccgcagg
aggaagctgccagccccggagaacggtctggacgagggactggcgagccagttgcccaca
cgagcgctgctgggctgggacgaggagcagagggaaggcctgcccgagcgcatcggttca
gccacgagcctgagcagcgctgtcatcaacaaccggctccaggagctggtgaagctcttc
aaagagaggaccgagaaggtgaaggagaagctgaccgaccccgatgtcagctcggacgac
gagagccctgcggcatcccccaccaagcgggcgcctgcagcagcaccggtgcctccccca
ggaggggagccagagggggacaaaccggcgggggacgagcactactgcgagatgctgtgc
tgcacgttcaagtaccggccctggctggaccgcctgaaaaactaccagttccccaccagc
atcgacccacttaccaatctgatgtacgtgctgtggctgttcttcgttgtcatggcctgg
aactggaactgctggttgatccccgtccgctgggctttcccctaccagacgccggcaaac
atccactgctggctgctcgtggactacctctgcgacctcgtctatctgctggacatcctc
atctttcagacccggctgcagttcgtccgggggggagacataataaccgatcaaaaggcc
atgaaagagaactacctgcgatcccaacgctttaagatggatgtggtgtgcctcctgccc
ctggatttcttctacttcaaagtcggtgtcaacccgctcctgcgctttcctcgctgtctg
aagtacatggccttcttcgagttcaacaaccgcctggaggctatcctgagcaaggcgtac
atctacagagtgattcggaccactgcctatttactgtacagcttgcatgtgaactcctgc
ctctattactgggcatcagcctacgaaggactgggctccaccacctgggtctacgatggg
gaaggaaacagctatatccgctgctattactgggcagtcaaaaccctcatcaccatcggg
ggcctgccggaccccaagacactgttcgagatcgtcttccagctgctgaactacttcaca
ggcgtctttgctttctccgtcatgatagggcagatgagagatgtggtcggcgccgctacc
gcagggcaaacttactatcggagctgcatggacagtaccattaaatacatgaacttctac
aaaatccccaaaactgttcagaaccgggtgaaaacgtggtacgagtacacgtggcattca
caaggcatgctagatgagtcagagctgctggtgcagctgccggacaagatgaggctggat
atcgccatcgacgtgaactacaacatcgtgagcaaagtggccctcttccagggctgcgac
aggcagatgatcttcgacatgctgaagcggctcagatcggtggtctacctgcctaatgac
tacgtgtgtaagaagggagaaatcggccgcgagatgtacattatccaggcgggacaagtg
caggtgctggggggacccgacggcaaaaccgtgctggtgactctgaaagccggatccgtg
tttggagaaataagcttgctggcggcaggagggggaaatcgccgaacagcaaacgtcgta
gctcacggcttcgctaaccttttcattttggataagaaggacttgaacgagattttggtg
cattatccggagtctcagaagctgctgcgtaagaaggccaagaaaatgctgaaaaacaac
aataaacccaaagatgagaaaggagcgcctggaaaccccctgatcatccccccgaaagct
gacaccccgaagctcttccaggctgcgctggccgccacggggaggatggggggcaaaggg
ccgctggcgcagctccggtggaggctgaaggagctgaaggcgatgcaggcgacgcagggt
tccagtttcagtccgatcccaccgaaatcaccagtgcaccagagatcgcctgtcacctcc
cacaaagcacgcacccgcccgggagaagaaatattctcaaaatcttctgatagtttagtc
accactcgtgtgatttctacggcacaagaggatgaagaaatccttgctgctgagattttg
gagaaagaagaagaagaaaaagaagagaaatga
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