Gymnogyps californianus (California condor): 127021332
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Entry
127021332 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gcl03036
]
127021332
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127021332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
127021332
NCBI-ProteinID:
XP_050760276
LinkDB
All DBs
Position
12:17941135..18039762
Genome browser
AA seq
2887 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQKMSEFDQLNQYDSLKLHSVDQSFNSSADNVLSPHSQFSCSPVHPQNQSNGMFPDVADG
SPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRSQQS
RNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPPVSNPSASQQPLSVQQFSQTASASIHFC
GNQEGNFDGQSPTITPCSVNNSQQFSSPYSYSNNRISPTSLLQSTTALSTNQQTHSISDF
TGSDAFTSQTGTKQETTEHMLNPSTPLNSNSFQMLHSAHPQGNFSSSKLSPVNINFPAST
GSASQISHFADPIESNGFTSLDENLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFVQ
DSTSHVLEHDLEHHITPQQVTQSSDLVRAQSQSQIHPWHSSVSNQHLQDRSRVTLQGQPP
SSKKADGSGSYTKLQNTQVRAMSEKKQKKKADSESKQEKANRIISEAIAKAKERGERNIP
RVMSPENFPSVSAEGKEEKKGRKVKSKPKDKESKKPKTGSSSKIKEKTKIGKLIITLGKK
QKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVKI
KKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVETEEFFVKYKNYS
YLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSLC
EDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNS
WKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILL
AGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVR
GTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLL
TGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKE
DVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCC
NHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIF
SQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG
INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKL
GLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQ
RRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLV
IDTPRIRKQTRPFSATKDELAELSDVESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLLV
YGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQ
TRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHC
NKVLLRVRMLYYLKQEVIGNEFQKVFDGIDASEIDVWVPEPDHSEVPAEWWDADADKSLL
IGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAMF
KDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQI
QPAFPIQTSMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRF
DWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASRT
LYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDY
HILRDPELSFMSXQRNYNQNKVALSRTSTPLLHQYQMALSGSPLTPQSRLSDAKVNAFED
TKAKNENLKEDPQSSEEESMSVEETQTIMKSEPLSPKNGTPIQNTDHKPSVKTETDRRMV
AARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGS
SSSSSSSCSSASSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVASLSTT
QDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRS
YDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPLAGVKEEYDQSPQMSKVKKHVREKEFT
VKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFPKSLPK
SGTSSHLTASANGVIVDSQPVIKKRRGRRKNVEGVDVLFINRNKQPNHVNPGINSCQVAA
GINPALTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVEDSGAC
IPRMQLHDGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLKDLCRF
LKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKATAAAA
AATAASVSVNPLLANGLLPGVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTTGGEAKN
MAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEEKKGSDSKEADTKKERTEDQNTDTGG
ENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQNSE
SNDTGSAKPTEEKEENSRVGDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTSSSSED
SDSSDED
NT seq
8664 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagagtttgaacctttgcacatagactcattgaaccatgtgcaagatgctcaa
aatcaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaaacttcactca
gtagatcagtcttttaatagctcagctgacaacgtcttatcaccacactctcaattcagt
tgttcaccagttcatccgcaaaaccagtctaatgggatgtttccagatgtggctgatggt
agtcctatgtggggtcatcaaactgccacaactgtttcgaatcaaaatgggtcccccttt
caccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgacttt
gccttatttcaggctaacgaaccgcagcatcagtgtgcctcgctacggtcgcaacaaagc
agaaacaacacggggcaagatgctctgagtcagccaaaagacttcatggaagttaacgta
tctacttctctcagagtcagtgttaaccacccacctccagtttctaatccatcagcttca
cagcagcctctgtctgttcaacagttttctcaaactgcaagtgcttcaatacatttttgt
gggaatcaggaaggaaattttgatggacagtccccaactattactccatgttctgtcaat
aatagccaacaattttcatctccatattcttactctaataaccgcatttctcctaccagc
cttcttcagtctacaacagctctttctactaaccagcagacgcactctatctccgacttc
actggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcacatg
ttgaatcctagtacacctttgaattcaaatagttttcaaatgttgcattctgcgcatcct
cagggcaactttagtagttcaaaactctctcctgtgaatattaattttccagcttctact
ggttctgcttctcagataagccatttcgctgaccctattgaaagcaacggtttcacgtct
ttagatgagaatttacttcatcaagtcgagactcataatgaaccatttacagggcttgac
ccggatgacctccttcaggaagaccttctgccacagttcgatgattctgcatttgttcag
gatagcacaagccatgttctagagcatgacctagaacatcatataaccccacagcaagtg
acacagtcatctgatcttgttcgggcacagtctcaaagtcagatccatccttggcattct
tcagtttctaatcagcatctgcaagacagaagtcgtgtaaccttacaaggacagcctcct
tcctccaagaaggctgatggttcgggatcatatactaagttgcagaatacccaggtgagg
gcaatgtctgaaaagaagcagaagaaaaaagcggactcagaaagtaaacaagagaaggca
aatcgcataatatctgaagcaattgcaaaagcaaaagagagaggagagagaaacattcca
cgtgtaatgagtcctgaaaacttccccagtgtgtcagctgaaggaaaagaggaaaagaag
ggtagaaaagttaaatccaaaccaaaggacaaggagagcaaaaaaccgaaaactggttcc
tcgtccaaaattaaagagaaaacaaaaattggaaagctcatcatcacactgggtaagaag
cagaaaagaaaaaatgaatcttcagatgaattgtctgatgctaagcagactccgcagcgg
ccattgaaagatgaagactcacagaagagaagatcaaatcgtcaagttaaaaggaaaaaa
tatgctgaagaaggagaaggaaaacaatcagaagaagaagctaaagtttctgtgaaaatc
aaaaagaattctgcccctttacctgctgaacagcctttacagttatttgtggaaaatcca
agtgaagaagatgcagcgattgtagataaaatcttatcctccagggtaataaagaaagaa
atatctgctgggatgacagtagaaacagaagagttttttgtcaagtacaagaactactct
tatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccagcag
aaaataaaacgattcaaactaaggcaagcacaaagagctcacttttttgcagatatggaa
gaagaaccttttaatcctgactatgttgaagtagaccgggtattagaagtatctctttgt
gaagataaagacactggtgagcctgttatttactatttagtaaaatggtgttccttgcca
tatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaattt
gaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaactcc
tggaagaagatagaacagtccagggaatataaaaacggcaatcagctcagggaatatcaa
ctggaaggacttaactggctcctattcaactggtacaataggcgaaattgcattttagca
gatgaaatgggtcttggcaaaaccattcagtcaattactttcctctatgaaatcctcctg
gctggtataagagggccttttctgatcatagctccgctttccactataacaaactgggaa
agagaatttcgcacgtggactgaccttaatgttgtagtgtatcatggaagtatgatcagc
agacagatgattcagcagtatgaaatgtacttcagggactcccaggggcgtattgttcga
ggtacctacagattccaagccattatcacaacttttgaaatgattcttggtgggtgtcca
gagttaaatgcaattgaatggcggtgtgttattattgatgaagctcacagactgaagaac
aaaaattgcaaactcttggaaggactaaaattaatgaaccttgagcataaagtgctgtta
acaggtaccccactgcagaacacagtagaagaattatttagcctccttcattttcttgaa
ccattgcgttttcctgctgaatctacatttatgcaagaattcggagaccttaaaacagag
gaacaggttcagaaactacaagctatcctgaaacccatgatgctcagacggttaaaggaa
gatgtagagaagaagctggctcctaaggaggaaactataattgaagtggaactaactaat
attcagaagaaatactatcgagcaattttggagaaaaattttgctttcttatccaaagga
gcagggcaagcaaatgtacccaatctggttaacactatgatggaactcagaaagtgttgt
aatcacccttatctcatcaaaggtgctgaagagaaaattcttggagagtttaaagaaaca
tatagcccaagtgctcctgacttccatctgcaagcaatgatccagtctgctggtaaattg
gttcttattgataaacttcttccaaaaatgaaagcaggaggccacaaggtccttatcttc
tctcaaatggtgcgctgccttgatattttggaggattaccttatacataaaagatactta
tatgaacgaattgatgggcgagtacgagggaatctcagacaagctgcaattgaccggttc
agcaaaccagattccgatcgctttgtcttcctcctgtgcaccagagctggtggtttgggc
attaatttgactgcagcagatacatgtataatttttgattctgactggaatcctcaaaat
gatctgcaggctcaagcccgttgtcacaggattggtcagaacaaagcagtgaaggtctac
agactgataacacgtaactcctatgaaagagagatgtttgacagagcaagtctgaaactg
ggactggataaggctgtcttacagagtatgagtggaagagaaaacagtgtcggtggtatc
caacaactctccaaaaaagaaatagaagacttgcttcgaagaggtgcatatggtgccatt
atggatgaagaagatgaaggctctaaattctgtgaggaggacattgaccaaattttgcag
cgtcgtactaaaactatcacgattgaatcagaaggaaggggctccacatttgccaaggct
agttttgttgcatctggaaacaggactgatatttcactagatgatcccaacttctggcag
aaatgggccaaaaaagcagaaatagatatagatgctatcagtggtagaaacagcctggtt
attgataccccacgaattaggaaacaaacacggccctttagtgctacaaaagatgagctg
gccgagttgtctgatgtggagagcgagggtgatgataaaccgaaactccgcaggccttgt
gaccgttccaatggatacggaagaacagagtgctttcgggtggaaaaaaacttgctggtc
tatgggtggggtcgatggagagaaattttgtcacatggtcgcttcaagagacagctgaat
gaacaggatgtggagataatttgccgagctctattagcctattgtcttgttcactacaga
ggggatgagaaaataaaaagttttatatgggatctcattaccccaacagaggatgggcaa
acacgagagttacaaaatcatcttggcttatcagcccctgtgcctagaggaagaaaagga
aaaaaagtgaagacccaggctagcacttttgatatacacaaagcagaatggcttcgaaaa
tacaatccagaacatctgttgcaagatgaaggatacaaaaagcacataaaacatcactgc
aacaaggtcttgcttcgagtaagaatgctgtattacttaaaacaagaagtcattggtaat
gaattccaaaaggtgtttgatggaattgatgccagtgaaattgatgtttgggtccctgag
ccagatcactctgaagttcctgctgagtggtgggatgcagatgcagataaatcccttcta
attggagtttttaaacacggttatgaaaaatacaacacgatcagagcagacccagcactg
tgcttcttggaaagggttggcaagccagatgaaaaagccgttgctgccgaacagagagca
aatgattatattgatggggatgtagaagacccagaatataaaccagcaccagcaatgttt
aaagatgacatagaggatgatgtttcatccccaggtgatctagtaatagcagatggagat
ggacagatgatggaaggagacaaaatctattggcccactcagtctgccttaacaacacgt
cttcgccgcctaataacagcttatcaacgaacaagtaaaaataggcaggcccagcagatc
cagccagcattcccaatacaaactagtatgatgcagcctccatatgaagaagctgctcta
aatccaaagatggctgctaagattgaaagacagcaaagatggacaagaagagaagaagct
gacttttacagagttgtgtccacatttggagtggtgtttgatcctgagcggggacgattt
gattggaccaaatttagagcaatggctagactacataagaaaactgatgagagcttagag
aagtacttgtatgcatttatgtcaatgtgccggagagtctgtcgtctcccctcaaaagaa
gaactcgtagacccaaacatttttatccaacccattacagaggagcgcgcgtctcggact
ttgtatcgcattgaactcctaaggaaagtgcgagaacaggctcttagacacccacagttg
ttcgaacgactaaaactatgccagccaaacccagacttacctgtctggtgggagtgtggg
actcatgacagggatttacttattggagctgctaagcatggagttagcaggacagattac
catattcttcgtgatcctgaactctcatttatgtctngccagaggaactataatcaaaat
aaggtggcactctcaaggacttctactccactcttgcatcagtaccagatggcgttatct
ggttctcctcttacacctcagtcaagattgtcagatgctaaagtgaatgcttttgaggac
acaaaagctaaaaatgaaaatctgaaagaggaccctcagtcttctgaagaagaatctatg
tctgtagaggagacacagacgataatgaaatctgaaccgttgagtccaaaaaatggcaca
ccaatacaaaatacagaccacaaacctagcgtgaagactgaaacagacaggcgcatggtg
gcagcaaggacagagcctctaactccaaacccagcttccaaaaaacagagagtcagcaaa
aggggatctgactctagctctgactcagactctgactcagatagatcatcctgttcttcc
aggtcatcttcttcatcctcttcgtcttcctcatcttgttcacactctagatcaggctct
agctcttcatcatcttcatcttgttcttcagcatcttcatcctcatcctcatcatcgtcg
tcatcatcatcatcgtctgaagagagtgatagtgatgaagaggaggcacaaaaacgtgca
gaaggaaccccgcatataaaagcatatgatgaagagagcgtagcctctctgagcacaaca
caagatgagacgcaagacagtttccagatgaacaatgggacaccaaattccagttatctc
ctacaaggtggatacatgttggctgcatcctactggccaaaggatcgagttatgattaat
cggcttgacagtatttgtcaaacagtgttgaaaggtaaatggccttcagcaagaaggagc
tatgacagcaatacggtggcatctttctacacaaccaaacttctggatagcccaggtgca
gctgcagattacagtgagcccagcgcaccaacaccccctctcgcaggtgttaaagaagaa
tatgatcaatcaccacagatgtcaaaggtgaagaagcatgtacgagaaaaggagtttaca
gtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaagcagggactgtctcag
aaaaggccatttgaaagcgaggaaggtgcattgggacagcagcaatacctggctcggcta
cgtgaactccagaatgcttcagaaaccagccttgtcaacttcccaaaatcacttcccaaa
tcaggtacttccagtcacttaacagccagtgccaatggagtcatagttgacagtcagcct
gtaatcaaaaagagaagaggaagaaggaagaatgtggagggagttgatgtcctctttata
aatagaaataaacagcctaatcatgttaatccaggtattaactcctgtcaagttgctgca
ggaataaacccagcactcacttacacgcagtcccaaggcatgcttgatgcagagagtcca
gttcctgttattaacctaaaagatggaacaaggcttgcaggtgatgatgcccccaaaaga
aaagatttagaaaggtggcttaaagaacatcctggatatgttgaagattcaggagcttgt
attcctaggatgcagctgcacgatgggaggcccaaacaaaaaagacaccgttgtcgaaac
cctaacaaactggacattaatagtttgactggtgaagaacgtgttcagctcataaataga
agaaacgcaagaaaggtgggaggtgcatttgctccccctctgaaggatttgtgcaggttc
ttgaaagaaaatccagagtatggagtggctcctgaatggggagaagttgtaaaacagtct
ggatttcttccagaaggtatgtttgaccgtattctcactggacctgttgtgcgggaagaa
gtaagccggagaggaaggcgccccaaaagtgagattgctaaggcaacagcagctgcagca
gctgccaccgctgcaagcgtatcagttaaccctctgctggcgaacggattgcttccagga
gtggatctgcctagtcttcaggccttacaacaaaacctgcaaaacctgcagtcgctgcaa
gtaacagcaggattaatgggaatgccggctggtttaactactggaggagaagctaagaac
atggctgccatgttccccatgctgctgtcagggatggctggattaccaaacttgctgggc
atgggaggacttctaacaaagtctacagaatctgtttcagaggaaaaaaagggaagcgat
tcaaaggaggcagatacaaagaaagaaaggacagaagaccaaaatacagatactggtggt
gaaaactctgtttcaagttctccttcaacatcctctgctgctgcagctgccaatcctctc
tctcttaacccgttacttctgtccaacatactttacccagggatgcttctcactccaggc
cttaatcttcatatcccagctttgtctcagtctaatatttttgatgtacagaacagtgaa
agcaatgacacaggctcagccaagcccacagaagaaaaggaggaaaattctagggttgga
gatcaggaagacaaagggggaacagagccaagctctcacaatgaaaacagcacagatgag
ggttcagagaaagcagatgcttcatctggatctgatagtacatcgtcttcatctgaggat
tcagattctagtgatgaagactga
DBGET
integrated database retrieval system
