Gymnogyps californianus (California condor): 127021397
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Entry
127021397 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-4-like
KO
K06762
contactin 4
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gcl04515
]
127021397
Cell adhesion molecules [BR:
gcl04515
]
Immunoglobulin superfamily
Contactins
127021397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Ig_C17orf99
Sp38
V-set_CD47
C2-set_2
Pur_ac_phosph_N
fn3_2
Tissue_fac
fn3_4
Motif
Other DBs
NCBI-GeneID:
127021397
NCBI-ProteinID:
XP_050760378
LinkDB
All DBs
Position
13:complement(2882722..3206650)
Genome browser
AA seq
1029 aa
AA seq
DB search
MRLLWELLVLQSFMACLADDNTLHGPVFLQEPNSMIFPLDSEEKKVKLSCEVKGNPRPTI
GWKLNGTSIDIGMDYRYSMVEGNLLINNPNKTQDTGTYQCVATNPFGTIVSREAKLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPTFVHQDNRRFVSQETGN
LYIAKVEASDVGNYTCVVTNTVTNSRVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPSA
KGTTVKLECFALGNPVPTISWRRADGKQIPRKARRHRSSGLLEIPNFQQEDAGLYECVAE
NVRGKNVARGQLTFYAQPNWIQKISDARAAIEESVVWECRASGRPKPSYRWLKDGEPLLP
QGRVQLEQGSLTITNVSLSDAGMYQCVAENRHGIIFASAELSVIAVGPDFSKTLLKKLTL
VKVGGEVIIECKPKASPKPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDAGSYTCV
ATNHXGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIMFTWSFNGH
LIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPG
PPEAVTIDEITDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEIIDGRTFT
ATVVGLNPWVEYEFRVVAANLIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVI
TWETVPEELQNGGGFGYVVAFRPFGTVSWMQTVVASPDAARYVFRNETLPPFSPYEVKVG
VYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSLSASDVEVSWAPPWENQHKGRIQGYE
VRCWRHDEKEESAKRIRTVGNQTSTKVSNLRGNALYHLAVRAYNTAGTGPSSAVVNVTTK
KPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRQSSTSVIETNKTS
VELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSNACTLSAISTIM
ISLTARSSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatgggaactgctcgtgctgcaatcattcatggcgtgccttgcagacgac
aacacactgcacgggccagttttccttcaggagcccaacagcatgatcttccccttggat
tcagaggaaaagaaagtgaagctgagctgcgaagtaaaaggaaatcccagaccaaccatt
ggctggaagttaaatggaaccagtattgacattggtatggattaccgctacagcatggtg
gaaggcaacctgttgatcaataatcccaataaaacccaagatactggaacataccagtgt
gtagcaacaaacccatttggaacgattgtcagcagagaagcaaagcttcagtttgcttat
cttgagaacttcaaaaccagaacgagaagcacggtgtctgtccgccagggccagggcatg
gtgctcctgtgtggaccaccgccacattctggagagctcacctacgcgtggatcttcaat
gagtacccgaccttcgtacaccaggacaatcgccgcttcgtttcgcaagagactgggaat
ttgtacatcgcaaaggtagaagcttcggacgtgggcaactacacatgcgtggtgacgaac
acggtgaccaacagcagggtcctgggtccccccaccccgctcatcctcaggaacgacggg
gtgatgggagagtacgagccgaaaatagaagtgcagttcccagaaacggttccatctgca
aaaggaacaacggtgaaactggagtgctttgccttggggaacccagttcctacaattagc
tggaggagagcagatgggaaacagatacccagaaaagccaggagacacagatcaagtgga
cttcttgaaatcccgaattttcaacaagaagatgctgggctctatgagtgtgtagctgaa
aatgtgagagggaaaaacgtggcacgaggacaactgacattttatgctcagcccaactgg
attcagaaaatcagcgatgcacgcgcagccatagaggaaagcgtcgtctgggaatgccga
gcgagcgggagaccgaagccctcgtaccgctggctgaaggacggggagccgctgctgccc
cagggcagagttcagctagagcagggctcgctcacgataacgaacgtcagcctgtcggat
gccggcatgtatcagtgtgtagcggaaaacagacacggcatcatttttgccagtgcagaa
ctgagtgtcatagccgttggtccagacttttccaaaacactcttgaaaaagttaacgctt
gttaaagtgggtggtgaagtaatcattgagtgtaagccgaaagcttcccccaaacctact
tattcgtggaagaaaggaaaagacatcctaagagaaaatgagagaatcactgttttggat
gatgggagcctccggattgtcaacgtcaccaaatccgacgcgggaagttacacctgcgtg
gccacaaaccacnttgggacagcaagcagcacgggcagcttggttgtgaaagatccaacc
cgggttatggtgtcacctttcagcatggatgtcactgttggagaaagcattgtcttgcct
tgtcaggtatctcacgatcactcgctagatatcatgtttacctggtcatttaatggacac
ctgatagactttgaaaaagatggggatcactttgaaagagttggagggcaggattcagct
ggtgatttgatgatcagaagcatccagctgaagcatgctgggaaatatgtctgcatggtg
caaacaagtgtggacaagctatcggctgctgcagacctgattgtaagaggtcccccaggt
ccaccagaagctgtgacaatagacgaaatcaccgacaccaccgctcagctgtcctggagg
ccgggagcagacaaccacagtcctattacaatgtatgtcgtacaagcaaggacccccttc
tcggtgggatggcaagcggtgagcacagttccagagatcatcgatggcaggacgttcaca
gcaacagtggtgggtttgaacccttgggtcgagtacgaatttcgagtcgtggctgccaac
ctgatcgggattggagaacccagcagaccttcggagaagagaagaactgaagaagctctt
cctgaagtgaccccggctaacgtcagtggaggtggagggagcaagtctgagctggtcatt
acgtgggagacagtgcccgaggagctgcagaacggaggcggcttcgggtacgtggtggcc
ttccgccccttcggcaccgtcagctggatgcagaccgtcgtggcctccccggacgccgcc
agatacgtcttccgcaacgagaccttgccgcccttctccccctacgaagttaaagtgggg
gtgtacaacaacaagggggaagggtcgttcagccccgtgacggtcgtctactcggcagag
gaagagccgacgagagccccaaccactgtcttggccagaagtctttctgcctcagacgtt
gaagtttcttgggctcccccttgggagaaccagcacaaaggaagaatacagggatatgag
gtcagatgttggagacacgacgaaaaggaagaaagcgcaaaaaggattcgaacggttggc
aatcaaacgtctacaaaagtcagcaacctgagaggcaatgcgctgtatcacttggcagtc
agggcgtacaacacggctgggaccggcccctccagtgccgtggtcaacgtcacaaccaaa
aagccaccaccgagtcagcctcctgggaacatcatatggaattcgtccgactccaagatc
atactgaactgggaccaagtgaaagcgctggacaacgagtcagaagtgagaggctacaaa
gttttgtacaggtggaacaggcagagcagcacgtccgtcatagaaacgaataaaacctcc
gtggagctctccctgccgttcgacgaggactacatcatagagataaagccgttcagcgac
gggggcgacggcagcagcagcgaacaaatccgaattccaaagatatcaaatgcgtatgcg
agaggatccggctcttcgacctccaacgcctgtacactgtcagccatcagcacaataatg
atatcgctcacagctcggtccagtttatga
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