Gymnogyps californianus (California condor): 127021482
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Entry
127021482 CDS
T08687
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127021482
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127021482
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
127021482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-TRAF
Prok-RING_4
PDZ_Tricorn
zf-rbx1
U-box
TRAF3_RING
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
127021482
NCBI-ProteinID:
XP_050760518
LinkDB
All DBs
Position
13:4624265..4773751
Genome browser
AA seq
1061 aa
AA seq
DB search
MGFELDRFNGDVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVNCQRIS
TKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQVL
NLRDVEAHMRERCEARPAGLCEQGCGLMLTHGERRAGGHGCLRALRAHGAALQARAAALE
KALKKEALRAGKREQSLLSRLAAAQLELQVTALRYQKRFTQYSARLDALARARAASPGKG
EETKALTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDTGPAAKEGGLQIHD
RIIEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTKVFTPPHDSQLVDVGTQTDI
TFEHIMALSKMGSPTPPVSVLDPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEV
DLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQN
REEAVALLTSEESKNISLLVARPEMQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNADDHTTSSNTL
GSQKQLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDECERFRELLELKCQVKSAN
PYSLYYHNSTLDMSKSDQESVDRELEMLNEELRNIELECLNIVRAHKMQQLKDQYREPWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RTAEGISCQGNEGAAAYNVSQKNLFASSESHESSTGKCHASAKDPDLGKQLESKERKASD
GSKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVS
MCKDFNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAIS
EMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQGAEDKKEMNIIELSHKKM
MKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgagctggatcgcttcaacggggacgtggatcccgacttcaaatgcaatctg
tgcaacaaagttctggaggacccgctgaccaccccctgcggccacgtcttctgcgccggc
tgcgtgctgccttgggtggtgcagcaaggcagctgccccgtgaactgccagcgcatctcc
accaaggagctcaaccacgtcctgcccctgaagagcctcatcctcaagctggacatcaag
tgcgacaaccacgcgcggggctgcgaggcggtggtcccgctgcaacacctgggcgagcac
gccgagacctgcgacttctccccggccaagtgccgcaaccgcggctgccgccaggtgctc
aacctccgcgacgtggaggcgcacatgcgggagcgctgcgaggcgcggcccgccggcctc
tgcgagcagggctgcggcttgatgctcacccacggcgagcgccgcgccggcggacacggc
tgcctgcgcgccctgcgtgcccacggagccgcgctgcaagcgcgggcggcggcgctggag
aaggcgctgaagaaggaggcgctgcgcgccggcaagcgggagcagtcgctgctgtcgcga
ctggcggcggcgcagctggagctgcaggtgacggcgctgcgataccagaagcgcttcacg
cagtacagcgcccgcctcgacgccctggcccgcgcccgcgccgcctcccccggaaagggt
gaagaaactaaagcactgactctcgttcttcatcgtgactctggctctcttggatttaat
attattggtggccgaccgtgcgtggacaatcaagatggttcatctagcgaaggaattttt
gtatcgaaaatagttgacacggggcctgctgctaaggaaggagggctacaaattcatgac
aggattattgaggtcaatggaaaggatttatctaaagcaacacacgagcaggcagtggaa
gcattcaaaacggccaaggagcccattgtggtgcaggtcctgagaagaactccacgcacc
aaggtcttcactcctcctcacgactctcagctggtagatgtgggcacacagacagatatc
acttttgaacacatcatggctctaagcaagatgggctcacctactccacccgtctctgtg
ctagacccatacctcctacctgaagaccatccatccgtgcatgaatactatgacccaaat
gactacatgggaggaattcatcaagaaatggaccgagatgagttggaattagaggaagta
gatttacatagagtgaacagccaggacaagcttggccttactgtatgttacagaacggat
gatgaagatgacatgggtatttatgtgagtgagattgatcccaacagtattgctgcaaaa
gacggtcgactccgagaaggggatcgcattattcagatcaatggcatagaggtacagaac
cgagaagaagctgtggcacttctcaccagtgaagagagcaagaatatctccttacttgtt
gcaaggccagaaatgcagctggatgaaggatggatggatgatgacagaaatgattttctg
gatgacttgcacatggacatgttagaggaacagcaccaccaggcaatgcaatttactgcc
agcatgcttcagcagaagaagcatgaggaggatggaggtaccacagatacagccactatt
ttatctaaccagcatgagaaggacagtggtgtggggcgcacagatgacagcactcgcaac
gatgagagctccgagcaggagaacaacgcggatgatcacaccacctcctccaacacttta
gggagccagaagcagctgacatacagtcatgacaccctaggaagtggcgatatgcagttc
agcaacgagtcgtttatctcggccgactgcacagacgtcgacttccttggcatccctgta
gacgaatgcgagcgattccgggaactgctggaactgaagtgccaggtgaagtctgccaac
ccttacagtctgtattatcataacagcactctggatatgagcaaaagcgaccaagaaagc
gttgacagagagctggagatgctgaacgaggagctgcgcaatatcgagctagagtgcctg
aatattgtgagagctcataaaatgcagcagctgaaagatcagtaccgggagccctggatg
ctacataacagcgggttccgcaactataacacaagcatcgatgttcgcaggcacgagctc
tcagacattacggagctccctgagaagtctgacaaggatagctcgagcgcatataacaca
ggcgaaagctgccgaagcacaccactcacgctggagatttcccctgacaattcgctgcgc
agaactgcagaaggcattagctgtcaaggtaatgagggggcagcggcatataatgtctcc
caaaagaatttatttgctagctcagaaagtcatgaatccagcactggtaaatgccatgcc
tctgctaaagatcccgaccttggcaagcagctggaaagcaaggagagaaaagccagtgat
ggaagcaaaagccctactcatggtcaaaaaccttctggctcctacgtctccccgtaccat
cactctccatataagcatgctcatattcctgcccacgcacagcactatcagagctacatg
cagctgatccaacagaaatcagcggtggagtatgcacagagccaaatgagtctggtgagt
atgtgcaaagactttaattcaagccagagcgaaccgaggatggagtggaaagtcaaggtc
agaagcgatgggacccggtacattacaaagaggccagtcagggacaggctgctgagagaa
cgtgccataaagattaaggaggagcgcagtggtatgactaccgatgatgatgccataagt
gaaatgaagatgggtcgttactggagcaaggaagagcggaagcagcatttagtgaaagcg
aaggagcagaggaggaggcgtgagtttatgatgcagagcaggttagattgcttaaaggaa
cagcaaggtgcagaagataagaaagagatgaatatcattgaactgagccacaaaaaaatg
atgaagaagagaaataaaaaaatatttgacaattggatgacaatccaagaactgctaacc
catggaacaaagtcaccagacggcacacgggtgtacaattccttcctgtcagtgactact
gtataa
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integrated database retrieval system
