Gymnogyps californianus (California condor): 127021655
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Entry
127021655 CDS
T08687
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127021655
Membrane trafficking [BR:
gcl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
127021655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
SlyX
ATG16
Motif
Other DBs
NCBI-GeneID:
127021655
NCBI-ProteinID:
XP_050760779
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Position
13:6444289..6463728
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AA seq
1106 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEESPWPDAVIPDYGDGTNSLISGGWDTS
SWGLSSNTEPQNRPISPTAITKPVRRTVVDESENFFSAFLSPTDVQSIQKNPVVSKPPAK
SQRPKEEVKSTLKESQHPSQLEVPVTTEAEVKDSSVAVLVDLKNLDIPKEKLEENSVLKS
NAKPEESTNEVTDEKVSALNLEVPEDALNEKSSVGGDGTGGAPDSTLRPLNAGTKDMGLE
TKERKTEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKSSLHL
MQTSFQLLSTSACADYNRLDDFQKMTESCCSSDAFERIDSFSVQSLDSRSVSEINSDDEL
SGRASASASVAVSPSAPKTETVDALKNKSENLNDTPVLHAEEAEMEESGRSATPVNSEQP
DVLVATVQTVQEQIVKEETEPQQDAVEKLLEEDTERQELKKMIDSLTEKLEKREIQLLST
SKEKARLEEAYDNLKDEMFRMKEESSSLSSLKEEFAQRIADAEKKLQLACKERDAAKKEV
KTVKEELATRLNTNETAELLKEKEEQIKGLMEEGEKLSKQQLHNSNIIKKLRAKEKEREN
INTKQNKKIKELEEELQHLKQVLDGKEDLEKQHRDSIKQLNSVVERQEKDLAKLQAEVED
LEERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAQDEAR
QQQEALAIQVADLRLALQRAEQQAARKEDYLRQEIGELQQRLQEAESRNQELSQSVTSAT
RPLLRQIENLQATLGAQTSAWEKLEKNLSDRLGESQTLLAAAAERERAATEELLSNKIQM
SSTESQNSLLRQENTRLQAQLEVERNRLKKMENENSRYEVELEGLKDEYAKTLEDAKKEK
TLLATQLEMEKMKVEQERKKAIFVQEAAKEKDRKSFTVETVSSTPSMSRSSSISGVDMAG
LQTSFLSQDDPHDHSFGPIATSGSNLYDAIRMGAGSSIIENLQSQLKLREGEISHLQLEI
GNLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRAQLKDLDQRYNTILQMYGEKAEEAE
ELRLDLEDVKNMYKTQIDELLKQRQN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcgcagctgtccagcttcgccaagcaggcgctgtcgcaggcc
cagaagtccatcgaccgggtgctggatatccaggccgaggagagcccttggcccgacgcc
gtcatccccgactacggtgacggaacaaattctctcataagtggaggatgggatacatct
tcctggggtttaagttcaaatacagaaccacagaatcggccaatatcgccaacggcaatc
actaagccagtgaggaggacagtagtagatgaatctgaaaacttcttcagtgcctttctc
tctccgacagatgttcagagtatacagaaaaatccagtggtgtccaaacctccagccaaa
tcacagcgacccaaagaggaggtgaaaagcactttaaaggagtctcaacaccccagtcag
ctggaagtaccagtgacaacagaggcagaagtgaaggattcctctgtagctgtcttagtg
gacttgaaaaacctcgatattcccaaggaaaaattggaagagaattctgtgcttaaatct
aatgccaagcctgaagaaagcacaaatgaagttaccgacgaaaaggtgtctgctctaaat
ttggaagtacctgaggatgctcttaatgaaaaatccagtgtaggaggggatggaacgggc
ggtgcaccggatagcactttgcggcctcttaatgcaggtacaaaagacatgggcttggaa
actaaggagcgaaagactgaggacaggcaaagcaatacgccgtcgcctccaattagcact
ttctcctcggggacatccacgactagtgatattgaagttctggaccatgaaagtgtaata
agtgagagctcagtaagttcaagacaagaagctgcagactcaaaatccagtcttcatcta
atgcaaacatcatttcagcttttatctacatctgcctgtgcagattataatcgtttagat
gactttcaaaaaatgaccgagagctgctgctcctctgatgcttttgaaagaattgattca
tttagtgtacagtctttagatagtagaagtgtaagtgaaataaattcagatgatgagtta
tcaggcagggcttctgcttcagcatctgttgctgtcagtccttctgcgccaaagacagaa
acggttgatgccctgaaaaataaatctgaaaacttgaatgacactcctgttttacatgct
gaagaagctgagatggaagagagtgggagaagcgcgacccctgttaattctgagcagcca
gatgttttggttgctactgtgcaaactgttcaagaacagattgtgaaagaggagactgag
ccgcagcaggatgctgttgaaaaattgttagaagaggacactgaaaggcaagagcttaaa
aagatgattgattcattaactgagaaactggagaagagggaaatacagttattaagtact
agtaaagaaaaggcacgcctggaagaagcttatgataacctaaaagatgaaatgtttaga
atgaaagaagagagcagtagcctttcatctcttaaagaggagtttgctcagcgaattgcg
gatgctgaaaagaagctccagctagcctgcaaagaaagagatgcagctaaaaaggaagta
aagactgttaaagaagaattggctactagacttaataccaatgaaactgccgaattactg
aaagaaaaagaagagcaaatcaaaggattaatggaggaaggagaaaaactttccaaacag
cagctgcacaattccaatattattaagaaattaagagccaaagagaaagagagagaaaat
attaacacaaaacagaacaaaaagattaaagaattggaagaggagttgcagcatttaaaa
caggtgcttgatggcaaggaagaccttgagaagcaacatcgagacagcattaaacaactg
aatagtgttgtagagcgacaagaaaaggatcttgctaaacttcaggcagaagtggaagac
cttgaagaacggaacagaagtgtccaggcagcacttgacagtgcatacaaggaacttgca
gatcttcataaagctaatgctacaaaggacagtgaggcacaagaagcagccctaagtcgg
gaaatgaaggcaaaggaagagcttgggttagctctggagaaggcccaggatgaggctcgg
cagcaacaagaagctttggcaattcaggtggcggacctgaggctggcactgcaacgtgca
gaacagcaggcagcaagaaaagaagactatttacgccaggaaatcggtgaactacaacag
agactccaagaagcagagagccggaaccaagaactaagtcaaagtgttacatctgctaca
cggccacttctccggcagatagaaaatctgcaagccacactgggagcacaaacctctgca
tgggaaaaattggaaaagaacctttctgacagacttggtgagtctcaaactcttctagca
gcagctgctgagagagaacgggctgctacagaagaacttctttctaataaaattcagatg
tcttctactgaatctcagaatagtcttttaaggcaagaaaatacgcgccttcaggctcag
ctagaagtggagagaaacagattgaagaaaatggaaaatgaaaacagtaggtatgaggtt
gaactagaagggctcaaagatgagtatgcaaaaactttggaagatgcaaagaaagaaaag
acgctgctagctactcagttagaaatggagaagatgaaagttgaacaggaaagaaagaag
gcgatttttgtgcaagaagcagcgaaggagaaggatcggaagtcatttacagttgaaact
gtttcaagtactccaagtatgtcacgctctagttccataagtggggttgacatggcaggt
cttcagacatctttcctctcacaggatgatcctcatgatcactcatttgggccaatagct
actagtgggagcaatctttatgatgctataaggatgggagcaggttcaagtataattgaa
aaccttcaatcacagcttaaactaagagaaggagagatttcacatctacagctggaaatt
ggaaaccttgagaaaacgcgatcaataatggcagaagaactggttaaattaacaaaccaa
aatgatgaacttgaagaaaaagtgaaggaaataccaaaattgcgtgcacagttaaaggat
ttggatcaaagatacaatacaattcttcagatgtatggagagaaagcagaggaagctgaa
gaactccgactggatctcgaagatgtgaagaacatgtacaagactcagatagatgaactt
ttaaaacaaagacaaaattaa
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