Gymnogyps californianus (California condor): 127021913
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Entry
127021913 CDS
T08687
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127021913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127021913
Transcription factors [BR:
gcl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127021913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
127021913
NCBI-ProteinID:
XP_050761204
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Position
14:complement(19951906..19959004)
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AA seq
318 aa
AA seq
DB search
MPVSRMRMRPWLEMQINSNQIPGLIWINKDKMMFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKVGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKDQK
KERKSKSSREARNRSKRKLYEDMRTEESAERLTNTPLPDDHSSYTVHDYAGQEVEVESTS
ITLDLSPCEVSGSLTDWRPPMEITMADSTNDLYQLQVSPLASSSEVTDEDEEEMNSEIFK
LLEPAQDWHTTSVGGKGFLTNEPGTQTMCSTYSYKEQDGEIDTTSGELEFRFFDQKSSLD
FSWLETVRPTMQVIPCGL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtcaagaatgcgcatgaggccctggttggaaatgcagattaattccaatcaa
ataccaggactgatatggattaacaaggataagatgatgtttcaaatcccatggaaacat
gcagctaagcatggctgggacatggagaaagacgcctgccttttccggagctgggccatt
catacaggaagatataaagtaggtgagaaagaccctgatccgaaaacctggaaggcgaac
ttccgctgtgctatgaattcactgcctgacatcgaagaagtgaaggataaaagcatcaac
aaaggctccagtgctgtcagggtttacaggatgctgccgcccttgacaaaggatcagaag
aaagaaaggaagtcaaagtcttcaagagaagcaagaaacaggagcaagagaaagttgtat
gaagacatgaggacggaggagtcagcagaaagactaaccaacactcctctgccagatgac
cacagtagctacaccgttcatgactacgcggggcaggaagtggaggttgagagcacgtcc
atcaccttagacctctccccctgcgaggtgagcggctcgctgaccgactggaggccgccg
atggaaatcaccatggctgacagcaccaatgacctctaccagctccaggtgtctcccctg
gcttcatcctcagaagtcacagacgaagatgaagaggaaatgaattcggagatttttaag
ctgcttgaaccagcccaagactggcacaccaccagcgttggggggaaagggtttctcacc
aacgagccaggcacgcagaccatgtgcagcacttacagctacaaggagcaggatggggag
atcgacacgacttcaggagagctggagttcaggttctttgaccagaaaagcagcctagac
ttctcctggctggagacagtgagacctaccatgcaagtcattccctgcggcttgtaa
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