Gymnogyps californianus (California condor): 127021954
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Entry
127021954 CDS
T08687
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03440
Homologous recombination
gcl03450
Non-homologous end-joining
gcl04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127021954
03450 Non-homologous end-joining
127021954
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127021954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcl03032
]
127021954
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127021954
DNA replication proteins [BR:
gcl03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
127021954
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
127021954
BRCA1-C complex
127021954
NHEJ (non-homologous end-joining)
MRX complex
127021954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
DUF2703
AAA_29
AAA_24
AAA_13
Motif
Other DBs
NCBI-GeneID:
127021954
NCBI-ProteinID:
XP_050761277
LinkDB
All DBs
Position
14:20001951..20025876
Genome browser
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELIAVQRSMVCTQKGKKTEFKTLEAVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHLSNREAQLAASKEN
VKSIENQLDPLKSSLAAVEQNLIKVMRLDNDVKALESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVKEKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRLQLQADRH
QEHITTRDSLIQSLAAQLELDGFERAPFNERHITSFHRLLKERQERDTEAANHLMREFAR
KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGFSDRILELDQE
IVKTEHELEKAERNSNVETLELEVQTLQNEKINLDKALRKLDQEMEQLNLHTMTITQMEM
LKKDKADKEEQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHGKNRKINQTRDSLADLNKR
LASVEYHKTYVSNELRRKEEQLSVHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDRDIPDLRNKIQNANRDLTGLKGEIEEQESLLRTALS
EEEGAKARLQDITLMERYQTDVRDVERKIAQQEAKLLGVDLSRTVLQVSHEKQEKKHLWD
TVTGKIELNQKLKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVELTTEVQS
LCREIKDAKEQVLPLNATLQKLQQEKEDLMNKRTASNKETQEKVNGIKEKVKDINKYVKE
IENYIQQGKEDYKKQKESELDEVNSQLAACEKQKEKISKEMETIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNIKQLVKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFRDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattgagaaaatgagtatcctcggagtgaggagttttggggtagaggataaa
gacaaacaaattatcactttctttaatccattgactattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatacatatccactggagattttcctcctggc
accaaaggaaactcatttgttcacgatccaaaggttgctaatgaaacagatgttagagct
cagattcgattacagtttcgagatgtaaatggagagctcatagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaacagaatttaaaacacttgaagctgtcattactaga
acaaagcatggtgagaaggtcagtctgagttccaagtgtgcagaaattgatcgagagatg
atcagcgcccttggtgtttccaaatcggtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactcgaaactctccgtcaggtacgactgaaacaaagc
ttgaaagtaaaagagtgtcagacagaactgaaatacctaaaacagaataaagaaaaagca
caggaaatccaggatcatcttagcaatagagaggctcagctggctgcttctaaggagaac
gtaaaatctattgagaatcaacttgatcctctgaagagttctctggcagcggttgaacag
aatctcataaaagtaatgaggctagacaacgacgtgaaagccctggagagcaggaggagg
cagatggagaaagataatcaagatttgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaagggatagataccagaaccaccagagaacagtgaaggagaaggagaag
agattatcagactgtaagcgtgaattagatagagccactaaagaatgccagagatttaac
agtgagaaatcggaactacttattgaacgaggtcgtcttcaactgcaagcagatcgtcac
caagaacacatcacaacgagggattcattaattcagtctttggcagcacagctggaatta
gatggttttgagcgagcaccttttaatgaaaggcacattaccagttttcacaggttgttg
aaggagagacaggaaagagatacagaagctgcaaatcatttgatgagagaatttgcacga
aaagaagcgatgaagcaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagttgagctgaagaatgta
aaatatgaattgcagcagttggagggcttttcagacagaattctggagttggatcaggag
attgtcaagacagaacatgagctggagaaggctgagaggaacagcaatgtagaaacactc
gaactggaagtacaaactctgcaaaatgagaaaataaacctggacaaagctcttaggaag
ttggatcaagagatggagcagttgaatctacataccatgacaattacccaaatggagatg
ctgaagaaagacaaagcagacaaagaagagcagattagaaaagtaaaatcaagacattct
gatgaactgacatcgctgttgggatactttccgaataaaaaccaacttgaagactggctt
catggtaaaaatagaaagattaatcagacaagggatagtcttgctgaccttaacaaacga
ctggcatcagtagaatatcataaaacttatgtcagtaatgagctaagaagaaaagaagaa
caattgtccgttcatgaagcaaaactttttgatgtctgtggaagccaagattttgacagt
gatctgaacaaacttcaagatgaaattgaaaaaagttcaaaacagcgagctgtgcttgct
ggagccactgcagtttattcgcagttcattacacaactgacagaggagaaccagtcatgt
tgtccagtttgtcaaagagtttttcaaacagaggccgaactgcaagatgtaattagtgat
ctgcagtctaagctccgtcttgctccagacaaactgaagtcaacagagtctgagcttaaa
agaaaagagaaaaaacgtgatgaaatgatgagtcttaaaccacttaggcgaactgtagtt
gaactccaagatagggacataccggacttgaggaacaagatacagaatgcaaacagggat
ttaacaggcctgaagggtgagatagaagaacaggaatcactcttgcggacagctttgtct
gaggaggaaggtgccaaggcgcgtttacaggatataacactaatggaaaggtaccagact
gatgttagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaagtagaactgttctacaagtaagccacgaaaaacaagagaaaaaacacttgtgggat
acagttactggtaaaattgagttaaatcaaaaactcaagcaagaccagcaaaatcagatt
cagcagctaaagagtacagttaatgagcttaaagcagagaagcttcagatttccagcagc
atgcagcgtcgtcgacaactggaggaacaaacagtggaattaaccactgaggttcagtcc
ttatgcagagagatcaaggacgcaaaagaacaggtacttcctttgaatgcaactttacaa
aaactgcagcaggagaaggaggatctaatgaataaaaggactgcaagtaataaagaaaca
caagagaaggtaaatggcataaaagagaaagttaaggatataaacaagtatgtgaaagaa
attgaaaactatattcaacaaggaaaagaagactataaaaagcaaaaggagtctgaactt
gatgaagtaaattctcagttagctgcctgtgagaaacagaaggaaaagataagtaaagag
atggaaacgattcgacaagatattgacactcaaaagatacaggaaaggtggctagaggat
aatcttactttgaggaaacggaatgaagagctaaaagaagttgaagacaatataaaacaa
cttgtgaaggagatgggagaaatgaaagtcccgcaaatgaaaaatgaacaaaaacattta
gaggagaaaatagaatctctgaaaagaaaccatcatgttgcacttggccgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaattcagagatgca
gaggagaaatacagggagatgatgattgttatgagaacaacagagctagtgaacaaagac
ctggatctttattacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataatccgtgacctttggcgaagcacctacagaggacaagatatt
gaatatatagaaattcgttctgatgcagatgagaatgtctcagcctctgataaaagaaga
agttacaattatagagtagtaatgataaagggagatacagcactggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgctctggcagaaaca
ttctgtctcaactgtggcatattggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacatgccctggtggagataataaaaagccgctcccaacagcgt
aactttcagcttctggtgataactcacgatgaagattttgttgaacttctgggccgttct
gaatatgtggaaacgttctataggataaagaagaacattgaccagtgctctgagatcatg
aaatgcagtgtcagctccctaggctcatacgttcattag
DBGET
integrated database retrieval system
