Gymnogyps californianus (California condor): 127021999
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Entry
127021999 CDS
T08687
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gcl04515
]
127021999
Cell adhesion molecules [BR:
gcl04515
]
Cadherins
Protocadherins
127021999
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
127021999
NCBI-ProteinID:
XP_050761341
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Position
14:complement(1882121..1891949)
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AA seq
1175 aa
AA seq
DB search
MPRTCDRCKDRLGMRRQAGKPPAVCRGSGVVGFASSMLLLSRSALHLPALWWYLFLSADA
QEVATFTVQYRVFEEVPLGTVIGTLAEHFEGGESGETADTFQLMETPGRFLLHVGSGDGV
LSTAGRVDREQLCRHSDPCWVSFDVLAARNLALIHVEVQVLDVNDNAPRFPTPELELEMS
ESASLRTRIPLDRALDADAGPNARCSYTLSPSEHFALEVVSSSDGTRHAELVVVKEVDRE
LHSSFDLVLTAADHGEPPKSGTALIKVIVLDSNDNSPIFAESSLTVEVREDALPGTLLVT
VTATDPDQGPNGEIEYSLSKHAPLEVLSTFSIDARTGSIILKHPLDYEETHAYELDVQAR
DLGANPIPAHCKILVKVLDVNDNAPDVHITWAARAPVLSEALPKDSFVALVTASDPDSGS
NGQVHCSLSQGYEHFRLKRTNSHSYVLMTNATLDRELRAEYNLTLVVRDRGDLSLAVMKH
LTICISDVNDNTPSFEKATYEVAIAENSEGPAFLLTVRATDPDLGFNGEITYSIPDSSAS
DLVSIDPTTGDVFALQAFDYEQVRSLEFLVTAEDGGHPKLASNVSIRLAVLDRNDNAPVI
TTPVLVGGMATLSVLVNAETGCFWVAPGNGSTQGTAAVTNATLVSCAGAPFLFSIVARDA
DSGINGALRYDLVGGDDAGLFILDPLLGQVFLNTSNASSLTGSERELVVRVSDEGDIPLH
TVARVRLVFRHHGAFSKISAQDPGWLSPSVVVVICLAALLGGCLLLLALTLSLHKKEKKD
GMAYNCREAEDARRQQQLKKPHRQIQKTDIHLVPLLRGRPREAEPPRPCQEDLPGTAAPA
PGGSPQAPLHLTPTLYRTLRNQRTQKDSDEQPATFNLPILQRRPCQPHRLKNLAKEAASP
PDAPPHCKSLVKPPQGPVGEPPLPPNQPVGAGGPGQPQPHQHILRSLVRLSLVALAEQSP
TGEFAMESPPVQQISQLLSLLHQGQFQPKTNHRGNKYTAKNGSRAAGLDADCLSTKDSGH
GESEAEDRDSESGFELSVQQLVGEELETLLEPQAELALKRLTAADPAWVARLSLPLTSSY
KDNVFSPDPLHSPQDEEAARQEKPRTFETFGKGAGADSDAAGTRLASTFLSEMSTLFEMI
LSQKVQVHNETGSGLLRQLSAHGKSLGLEDSAPVL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggacttgcgatcgctgtaaggaccgtttgggtatgcggcggcaggcgggcaag
cccccggcagtgtgccggggcagcggggtggtgggctttgccagcagcatgctactgctg
agccgctccgctctccatctcccagccttgtggtggtacctcttcctctccgccgatgcc
caggaggtggccacgttcacagtgcagtaccgggtgttcgaagaagtgccgctaggaacg
gtgatagggacgctggctgagcacttcgaggggggtgagagcggcgaaacggcggatacc
ttccagctgatggagacccccgggaggttcctgctgcatgtggggagcggggatggggtg
ctcagcacggccgggcgggtcgacagggagcagctgtgccggcacagcgatccctgctgg
gtctcgttcgatgtgctggccgcccgaaacctggctctgattcacgtggaggttcaagtg
ctggatgtcaacgacaatgcgccgcggttccccacgcctgagctggagctggagatgtcg
gagagcgcatccctgcggacgcggatcccgctggaccgagccctggatgccgacgccggc
cccaacgcccgctgctcctacaccctctcccccagcgagcactttgctctggaggttgtc
tccagctccgatgggacgaggcacgcggagctcgtcgtggttaaagaagtggatcgggag
ctgcactcctcctttgacctcgtgctgacggctgctgatcatggggagccgccaaaatca
ggtaccgctttaattaaagtcattgtcctcgactccaacgataacagccccatctttgca
gagagctctttgacagtcgaggttcgggaggatgctctgcctgggaccctcctcgtgacg
gtcacggccaccgaccccgaccagggtcccaacggggagattgagtacagcttgagcaag
cacgcacccctggaggtgctaagcactttcagcatcgatgctcgcacgggcagcatcatc
ctgaagcacccgctggactacgaggaaacccacgcctacgagctggatgtgcaagcccgg
gacctgggcgccaaccccatcccagcgcactgcaagatcctggtcaaagtcctggatgtc
aacgacaatgctcccgacgtccacatcacctgggcagcgcgggcacccgtgctctccgaa
gccctccccaaagacagctttgtggctctggtgacggccagcgaccccgattcgggaagc
aacgggcaagtgcattgctccctcagtcaagggtatgagcacttcaggctgaagaggacc
aacagccacagctacgtgctgatgaccaacgccacgctggacagggagctgcgtgccgag
tacaacctgacgctggtggtgcgggaccgaggtgacctctccttggccgtgatgaaacac
ctcactatctgcatcagcgacgtcaatgacaacaccccctccttcgagaaggccacctac
gaggttgctattgctgagaacagcgaaggacctgccttcttgctcaccgtccgtgccacc
gaccccgacctgggtttcaacggggaaatcacctacagcatcccggactcctctgcttcg
gatctggtctcaatcgaccccaccactggggatgtttttgccctccaagcttttgattac
gagcaggtgaggagcctggagttcctggtgaccgcggaggacggtggtcaccccaagctg
gcgtccaacgtctccatcaggctggctgtgctcgaccggaatgacaacgcacccgtcatc
accacgccggtgctggtgggaggcatggccacgctctccgtcctggtcaatgcagagaca
gggtgcttctgggtggcccctgggaacgggagcacccaagggactgcagcagtgaccaat
gcaacactcgtgtcgtgtgctggtgctcccttcctcttcagcattgtggccagggatgcg
gactccggcatcaacggggctctccggtatgatctggtgggtggggatgatgctgggctc
ttcatcctggaccctctcttggggcaggtcttcctcaacaccagcaacgccagcagcctc
actggcagcgagcgggagctggtggtccgggtgagcgatgagggggacatccccctgcac
accgtagcccgagtccgcttagttttccggcatcacggggcgttctccaaaatctcagcc
caggatcccgggtggctgagcccatccgtggtggtcgttatctgcctggccgctctcctg
ggtgggtgccttctccttttagctttaaccctgtctttgcataagaaggagaagaaggac
ggcatggcctacaactgcagggaggcagaggatgcccgcaggcagcagcagctcaagaag
ccgcacaggcagatccagaagacagacatccacctcgtcccgctgctccggggccggccc
cgggaggctgagcccccccgtccctgccaggaggatctgcctggcacagctgcccctgcc
ccggggggctccccacaggctcccctccacctcacccccactctctacaggaccctgaga
aatcagaggacccaaaaagactcagatgagcagccggcgaccttcaacctgcccatcctg
cagcgccggccctgccagccccacagactgaaaaatttggcgaaagaggctgcgagcccc
ccggatgcaccaccgcactgcaagagcttggtgaagccaccgcaggggcccgtgggagag
cccccgctgccacccaaccagcccgtgggtgctgggggacctgggcagccccagccccac
cagcatatcctcaggagcctggtccggctgtcgctggtggcactggcagagcagagcccc
accggggagttcgcgatggagtcacccccagtgcagcaaatctcccagctgctctccctg
ctgcaccagggccagttccagcccaaaacaaaccacaggggaaacaagtacaccgccaag
aacggcagcagggctgcggggctggatgctgactgcctgagcacaaaggacagcgggcac
ggcgagagcgaggcagaggaccgcgattcagagagcgggtttgagctctccgtgcagcag
ctggtgggagaggagctggagaccctcctggagccacaggcagagctggccctcaagagg
ctgacggctgctgacccagcatgggtggcccggctctccttgccgctcaccagtagttac
aaggacaacgtcttctcccctgaccctctgcattcgcctcaggatgaggaagctgcaagg
caggagaaaccaaggacctttgagaccttcggcaaaggtgctggggctgactcggatgcc
gctgggacaagactggccagcaccttcctttcagaaatgagcaccctctttgaaatgatt
ttgtcccagaaggtccaagtccacaatgaaacaggctcggggcttctgcggcagctgtcg
gcacatgggaagagccttggactggaagacagtgctcctgttctgtag
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