Gymnogyps californianus (California condor): 127022097
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Entry
127022097 CDS
T08687
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127022097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127022097
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
127022097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
zf-WRNIP1_ubi
Carboxyl_trans
UIM_2
Motif
Other DBs
NCBI-GeneID:
127022097
NCBI-ProteinID:
XP_050761478
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All DBs
Position
14:11740296..11779488
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AA seq
819 aa
AA seq
DB search
MPRKKKPTEGLDSRGQDGEEEEEEKRSPANAKKKRSFVDAFIIISDSDGEQESKEESGLQ
KKRTKQQLDRTKFAAKRKIAQMTEEEQFALALKMSEQEARQVNCQEEEEEELLRKAIAES
LNSCQPSDSSDATPQLSAEALGARGQSQPAEKGGSEILGGLALCPDTPRSECSSHSQSTR
ADGNGQMDVARSPLVVLKRLSQQIVESSLVSSIIVSPGKGQPVTRSSEKPSSPAKSDSSN
MLPSTLGEDLISFSPTFGRVTSGSWRLTPRRLFTSPSSSSEATGHEPKEQPLPCTGHSAG
EAGAGSSAMLWKSWTVERCGHPRRSGGGAGTKHTSQPGHAAKVCVSTEQAEQNEVPDSTP
ELCVLNAVEEKHKQEEARDTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQ
LLHKKEFGNPVVPSSSLSQNELGKGEQISRENGVADDTEDGDPDGQKESESITWLLPSKR
REAESPGHSMEEEKNSTSDDEPTTSYCQNFPFQASQVLPAEDVHEDEEPMQIAQSISMLT
PLGSKRSPDIVTENSAEEEISVCPETQPSPLEAIEAEREELCSGSRDAPMQAGGDEDAGR
TVSECSPTAADRVSCPLCDQGFPATEIELHAMYCNGIGGEEAGEDSPVLTRRQREARSKA
TSGESGPTSLDIDKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRSAKDVGRQE
RGLLRMLELSESKFAGADAGTPLAGLGDQHSPPALSARAGGAATGNPRSLRHLPFNISPV
KPGVSLEATDYVVDSEPHVALRLGSQQQTKGCRRRKRKF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaagaagaagcccacagagggcctggactctcgaggtcaggatggggaggaa
gaggaggaagagaagaggagcccagccaatgctaagaagaagcgcagttttgtggatgca
tttattattatatctgacagcgatggagagcaggagtcaaaggaagagagtggattgcaa
aagaagagaacaaaacagcagctggatagaacaaagtttgctgctaaaagaaaaattgca
cagatgactgaggaggaacagtttgcactggccctgaaaatgagtgagcaagaagccaga
caagtgaactgtcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagc
cttaatagctgtcagccctcggactcctctgatgcaacccctcagttgtctgcagaagcg
ctgggcgcacgaggccaaagccagcccgctgagaaaggcggctctgagatcctgggaggt
ctggcgctttgccctgacacccctcgctccgagtgcagctcccactcacagagcaccaga
gctgatgggaacggacagatggatgtcgcccggagccccctggtagtgttgaagaggtta
agccagcaaatcgttgaaagctcactagtatccagcataatcgtgtctccagggaagggc
cagcctgtgacaaggtcaagtgaaaagccttcctcaccagcaaaaagtgattctagtaac
atgttacctagcactctcggagaggacctcatctctttcagtcccacctttggcagggtg
acttcaggctcctggcgactgacacctcggagactgttcacaagcccctccagctcttct
gaagcaacaggccacgaaccaaaagagcagcccctgccctgcactggccattctgcagga
gaagctggtgccgggagctcagccatgctctggaagagctggaccgtggaacggtgtggc
caccccaggaggagtggtggaggagcaggtaccaaacacacctcgcagcctgggcacgcc
gctaaagtctgtgtttccacagagcaagcagagcagaatgaggtgcccgacagtacccct
gagctttgcgtactgaatgcggtggaggagaagcacaagcaggaggaggcgagagacaca
gtgcactattactggggcatccccttctgccccaaaggggtggaccccaaccagtacacc
aaagtcatcttgtgtcagctggaggtttaccagaagagcctgaagcaggctcagaggcag
ctattgcataagaaggagtttggtaacccagttgtgcccagttcttccttgagccaaaac
gagcttgggaaaggagagcagataagcagggagaatggggttgctgatgatacagaagat
ggagacccagacgggcagaaggagtctgagagcatcacctggcttctcccttcaaagagg
agggaggcagagagtccagggcacagcatggaagaagagaagaactccacttccgatgat
gaaccgaccaccagctactgccagaattttcctttccaggcctcccaggtgctgcctgca
gaggatgtgcatgaagatgaggaacccatgcaaattgcacagagcatctccatgttgacc
ccacttggcagtaaaaggagcccagatattgtcacagaaaactctgctgaagaagagatc
tcagtttgcccagagactcagccaagtccactggaagctattgaggcagagagagaagag
ctctgctcgggcagcagagatgcacctatgcaggctggtggagatgaagatgctggcagg
actgtgtctgagtgcagtcctacagctgctgaccgtgtgtcgtgcccgctgtgtgaccaa
ggctttccagctacggagatcgagctgcatgccatgtactgcaatggcattgggggagag
gaggctggcgaggacagtccagtgctcacccggcgtcagagagaggcaagaagtaaagct
accagtggtgaaagcggcccaacatccttagacattgacaagtgtgagaagtgctacctc
tgtaagtcactggtgccactgctgcagtatcagaggcacgtggacagctgccttcaggct
gctaggcaagctcagggaaccaggaggctgcgaagcgccaaggacgttggaaggcaggag
aggggactcctcaggatgctggagctctcggagagcaagtttgcaggcgctgatgcggga
acccccctcgctggactaggagaccaacactcccctcctgcactctcagccagagccggg
ggggcggcgacaggcaacccccgctcccttcggcaccttcctttcaacatctcccctgtg
aaacctggcgtctccttggaagccactgactacgtggtggactcggagccgcacgtggct
cttcgcttgggcagccagcagcagaccaaaggctgccgccggaggaagcgcaagttctga
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