Gymnogyps californianus (California condor): 127022158
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Entry
127022158 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127022158
Membrane trafficking [BR:
gcl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127022158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
SH3_1
SH3_9
SNAP
TPR_1
TPR_2
Serine_rich
Motif
Other DBs
NCBI-GeneID:
127022158
NCBI-ProteinID:
XP_050761561
LinkDB
All DBs
Position
14:9621114..9637499
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AA seq
1395 aa
AA seq
DB search
SDSVPIAPALPADGAGQKAHCALWLGLGPSRGAGRAVSSALTPASAAAACRLGTGGVAGH
MGCCLGTPWHQDLSLGCTGEECDSCCPHSPVLLPSWDRLQHTAAECRGKWWREKTMASGK
AVASEPSNPATKAAEGSLDTSLVLLAVREGFPPEISLFFSVESRSSRCLNSQLQEAARKK
LWALESDDRDVCALFKELSARLVCMQAQEDRFLLTFKTLEEVWKFSTYLTLGYVGSCLEQ
LLFDQEYWLNCALMEDTEIRVTVDEDRLATIYMGLLLQEGNFFSRAVPGVWQPEQEGEEG
LQLCKNELIHVKNVGEESKWEGMSLLTGQRGLVPVTALEPIPQPFYQWFLKNYAVSFGIS
QEISGATSQPIVKGRCTATEDHRGAAWDELSFSKGDSIEVIGFFIPGLPWFVGKSVSSGS
IGFVPTRYISPEACEPLGKGLVFLSEEEKSPLLCIACNGGEQHFTALLGDLARTDITSVY
RLDGFEPTAMFPKVPSEAVLRGCKDIQLLQSWEEINDLATTSTSELSSPGSESAPATLED
VLLEKLDDFDDPKFFIDLNARHMEDADVFDPILTFLNQDSYVPSFQSLYDLSFSFLNSTF
YGFSDEDELVLYLETSRNWAKRTHSVWAHVRLCFLLGKLCIKKVKFSQARVYFEEAMSIL
DRGFGDLPLLAALHVNLASIYLKQNMKHKFSSLLGKTVALLVCLPGRSFSSENELEVMMY
VLREAIAVGNAPLEARVCFLIVKLLLQLGKNDEVLPFTEHLQCLTTTLLCSDTSSVPLDA
TPILSYLYDKKYLPNIALASARLFVPSGVKGAPTPIWRAGFILQNTSKLLGSQLERNSIP
ALACFYLKQALHFSCESRAVPIQRTLCAILSRMYLQHGVLDGAVCYAATAVTLSRLMGEE
EAFESSLSLGWMYLLHSQPGPAADIMWQLLCSLHGTDSVTQGGAVHNLLAIALKGEGQVQ
KAAENYLRALHKAKETGNKRNQAIALANLGQLSLSRGASQLSELYLLQSAQLYAELQGSE
DLEMELVRVLLWLAQAMVNRQSMEDGKLCYELALVFALKWRNVRSQLHITESLCHFYSKV
SPNLQACITYHEHWVSLAQQLQDRELEGNVRQTLSQLYQALGTSEALRQSLDCTKQSLRI
FIDLEETVKAAEAWLQAGRLYYLMQEDELVEMYFQAAIQTALKWENFSLAMDLYEKAGDT
FFNGSRNRDRAVEFYRGGAVPLARKLKAIKTELRLFNKLAELQIGLQGYEKALEFATLAA
RLSIRVGDQLQELVAFHRLATVYYFLHMYEMAEDCYLKTLALRPPLLQCSGEALYYCKVY
CHLGNLTLHKLKDEQDAAAYFLLALAAATELGDQELQGLIRAKLGDIPSAPWGPEGTPSC
ATYWPRWLSEGGHVV
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
tctgactctgtgcccatcgcccccgccttgccagcagatggtgccggtcaaaaggcgcat
tgtgcattgtggctggggctggggccgagccgcggtgccggccgggcagtgagcagcgcg
ctcacccctgccagcgcagcagcagcctgccggctcgggactggcggtgttgctggacac
atgggctgctgcttggggaccccctggcaccaggacctgtccctggggtgcacaggtgaa
gagtgtgactcctgctgcccccactcgcctgtgcttctgcccagctgggaccgcctgcag
cacaccgcagccgagtgccggggaaaatggtggcgggagaagaccatggcatcaggtaag
gctgtggcatcggagccaagcaaccccgctaccaaggcagcagaaggctcgctggacacc
tccttggtgctgctggctgtcagggagggctttccaccagagatttcgctcttcttctct
gttgagagccgctcctcccggtgcctcaattcccagctccaggaagcagccagaaagaag
ctgtgggccctggaaagtgatgacagagatgtctgtgcgctgttcaaggaactgtcagcc
aggctggtctgtatgcaagcacaggaggatcggttcctcctcaccttcaaaaccctagaa
gaagtctggaagttttccacatatctgactttagggtatgtgggcagctgcctggagcag
cttctctttgaccaggagtactggctaaactgtgctctgatggaggacacagagatcaga
gttactgtggatgaagatcgcttggccaccatatatatgggtctgctactccaggaaggt
aactttttttccagagcagttcctggtgtctggcagccggaacaggagggagaggaaggc
ctgcagctctgcaagaatgagctgatccatgtgaagaatgttggagaggagtccaagtgg
gaagggatgtccttactgacgggtcaacgaggcctggtgcctgtgacagctctagagcca
atacctcagccattttaccagtggttcctgaagaattatgctgtgagttttggcatctcc
caggagatcagtggggcgacctctcagccaattgtcaaaggcaggtgcacagccacagag
gaccacagaggagcagcgtgggatgaactgagtttctccaaaggagacagcatagaagtc
atcggcttcttcattccaggactcccgtggtttgtgggcaaatctgtcagcagtgggagc
atcggctttgtcccaacccgatacataagtcctgaggcttgtgaacctctgggaaagggc
ttggtgtttctcagcgaagaagaaaaatcccccctcctgtgcatcgcctgcaatggtggc
gagcagcacttcaccgccctccttggtgacctggcacgcactgacatcacctctgtgtac
cggctggatggttttgaacctacagccatgttcccgaaagtgccatcagaggccgttctc
cgtggctgtaaagatatccagctgctccagtcttgggaggaaataaatgacttggctacg
accagcacctccgagctgtctagcccagggagtgaatcagcccctgctacgttggaagat
gttctcctggagaagctggatgattttgatgatcccaagttctttattgacctgaatgct
agacacatggaagatgctgatgtctttgaccccatattgaccttccttaaccaagacagt
tatgtgcccagttttcaaagcctctatgatctcagtttttcctttctcaactccactttt
tatggtttctctgatgaggatgaactggtcttgtaccttgagacttccaggaactgggcc
aagaggactcattccgtttgggctcatgtcaggctctgtttcctcttgggtaagctctgc
atcaaaaaggtcaagttctcccaggctcgagtctactttgaggaagccatgagcatcctg
gacaggggttttggggacctgcccctgttggctgcattgcatgtgaaccttgcctccatc
tacttgaaacagaacatgaagcacaagttctcctccctgctgggaaaaacagtggccttg
cttgtctgtttgcctggccgctctttcagctctgagaatgagctggaagtcatgatgtac
gtcctgagggaagccattgctgtgggtaatgctcccttggaggcacgggtctgcttcctt
attgtcaagctcttgctacaactgggcaaaaacgatgaagtgctgccctttactgagcat
cttcaatgtctcaccaccactttactctgctcagacactagttctgtgccactggatgcc
acccccatcttgagctacctgtatgacaagaagtacttgccaaatatcgcactggcctcc
gccaggttgtttgttcccagtggcgtcaagggggcaccaacacccatttggagagctggc
ttcatcctccaaaatacttccaaactcctgggaagccagctggagaggaacagcatccca
gcactggcttgtttctatctcaagcaagcactgcatttctcctgtgagagcagagctgtg
cccatccagaggacgctgtgtgccatcttgtccaggatgtacctccagcatggtgtgttg
gacggggcagtttgttatgcagccacggccgtaaccctcagcagactgatgggtgaggag
gaggctttcgagtcttccctctctttggggtggatgtatctcctgcacagccagccgggc
ccagctgcagatatcatgtggcagctcttgtgctcactgcacgggacggacagcgtgact
cagggtggagctgtgcacaatctcctggccattgccctcaaaggagaagggcaggtgcaa
aaggctgcagagaactacctccgggccctgcacaaagccaaggagactgggaacaagagg
aaccaggctatcgccctggctaacctggggcagctgagcctctcacgtggggcgagccag
ctgtctgagctctacctgctccagtcagctcagctctacgctgagctccagggcagtgaa
gacctggagatggagttggtgcgggtgctgctgtggcttgcgcaggccatggtgaacagg
cagagtatggaagatggcaaactctgttacgaactggcgttggtttttgccctgaagtgg
cgtaacgtgaggagtcagctccacatcaccgagtctctctgccatttctacagcaaagtg
tcccccaatctccaggcctgcattacctaccatgagcactgggtatctttggcacaacag
ctgcaggacagagagctggaaggcaatgtccggcagaccctcagtcagctctaccaggct
ttgggcacatctgaggctttgagacagtccctggactgcaccaaacagagtctaaggatc
ttcattgaccttgaggagactgtgaaagcagcagaggcctggctgcaggcaggaaggctc
tactatcttatgcaggaagatgagctggtggaaatgtactttcaggcagccattcagact
gctctgaaatgggagaacttctccttggccatggatctttacgaaaaagcaggtgatacc
ttttttaatggcagccgaaacagagatcgagcggtggagttttataggggaggtgctgtg
cccttggccaggaaactaaaggccattaagacagagctacggctgttcaataagctggca
gagctgcagatcgggctgcagggctacgagaaggcgctggagtttgccacgttggcagcc
aggctgagcatcagggttggagatcaattgcaagagctagttgcattccaccgcctggct
acagtctactattttctgcatatgtatgagatggcagaagattgctacctgaagacgctt
gccttgcgtcctcccttgctgcagtgctctggagaggccctgtactactgcaaggtgtat
tgccaccttggcaacctgaccctgcacaaactgaaggatgaacaggatgcagcagcctac
ttcctcctggccctcgccgcagcgaccgagctgggagaccaggagctgcaaggcctcatt
cgcgccaagctgggtgacatccccagtgccccgtgggggcccgagggcacaccaagctgt
gccacatactggcccaggtggctgagcgaaggcggccacgtcgtctga
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