Gymnogyps californianus (California condor): 127022169
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Entry
127022169 CDS
T08687
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127022169
Transcription factors [BR:
gcl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127022169
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
127022169
NCBI-ProteinID:
XP_050761574
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Position
14:12816310..12825002
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AA seq
702 aa
AA seq
DB search
MATALCRGGGRKARCAPVGGRREGAASVGANDRGRSNGRGGMERGARERPLRSGAPPEPP
PAPRRLPPPPPQREAKGPLRVLHIKVEEPEPEEGDPPGCRGDSRESGAEFRGSPAPWRGK
EEARGAIWRERDHERGSGERQNEVKVLERRGNGKEPWRGGAVKVEPPDVAVGSCRVKVEK
DDAPAGSLCGPARASTDDRKVQLCEGFGILPEDLKIPVVFHPLPPGTRIQIQGPLPSELI
HVTKVPVKQVPLKMQSLLEPSVKIETKNVPLTVLPSDSGMPDTPFSKDKSGHVKRPMNAF
MVWARIHRPALAKANPAANNAEISVQLGLEWSKLTEEQKQPYYDEAQKIKQRHREEFPGW
VYQPRPGKRKRFPLPVSAVFSGASQSIITTNPAGICPFQSPAYSVVIPNVKNSIGHPVCE
SPSAIHLPASSIQHALFQTTSASTASAAVPTPTLPLRPVISPQHFAEPAQTEALDVSSGL
SCSLKRPTPVFIESFSRNPSNIITTNGRFSVSNSEPPKEYPGVSIFPRGVPLPQATPFLH
SHLYESLPIGQPASLFGVPPRFSFQHPYFVPGPHYFPSSTCPFSRPPFGCGSFSSSVPEC
LGFYEDRYQRQEVMFSALDRDCPFKEYPEESIREGRRRCESLEVVSCHSSCNEERYLSPL
PQLDVGALEEVLSATSSTPSSIHLVNVTDSDEEEEVKLLREL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcattgtgtcgcgggggcgggaggaaggctcggtgcgcgcccgttggtggg
cggcgcgagggcgcggcgagcgttggcgccaacgaccgcgggcgatcaaacggccgcggc
gggatggagcggggggcgagggagcgcccgctccgctccggggctcccccggagccgccc
ccggccccccgccgcctcccgccgccccccccgcagcgggaggccaagggccccctcagg
gtgctgcacatcaaagtcgaggagcccgagccggaggagggagatcccccgggctgccgc
ggggacagcagagagtcaggggccgagttcaggggctccccagctccgtggcggggtaaa
gaggaggcccgcggcgccatctggagagaaagggaccacgaaaggggcagcggagaaagg
cagaacgaggtgaaggtgctggagagaagggggaatgggaaggagccctggagaggaggt
gctgtcaaagtggagccgcctgacgtggccgttgggagctgcagggtgaaggtggaaaag
gacgatgccccggctggatccctgtgtgggcctgctcgtgccagcactgatgaccgcaag
gtgcagctgtgtgaggggtttgggatcctccctgaagatctgaagatcccagttgtgttt
caccccttacctcctgggacccgcatacagatccaaggccctctgccgtcggagctgatc
cacgtgactaaagtgccagtgaaacaagtgccgcttaaaatgcagtctttactggagcct
tcagtaaagattgaaactaaaaatgtgcccctcacagtactgccctccgattcaggtatg
ccagatactccatttagcaaggacaaaagtggccatgtaaagcgtccaatgaacgcattt
atggtgtgggctaggattcatcggcccgccctagcgaaagctaacccagctgccaataat
gcagaaatcagtgttcagcttggattggagtggagcaaactgactgaagagcagaagcag
ccctattatgatgaagctcagaaaataaaacaaaggcacagagaggaatttcctggttgg
gtttatcaaccacgaccaggcaaaaggaagcgttttccactgcctgtctctgctgtattt
tccggcgcttctcagagtatcatcactacaaatccagctggcatttgtcccttccagtca
ccagcttactctgttgtcatccccaatgttaagaacagcattggacatccagtctgtgag
tctccttctgccatccatctgccggcttcttccattcaacatgctcttttccagactact
agtgcaagcaccgcatcagcggctgttccaactccaaccctgcccctgcgccctgtaatt
tcaccacagcactttgctgaacctgctcagacagaagctcttgatgtatcatctgggctc
agttgctccctgaagagacctacaccagttttcattgagagcttcagcagaaacccaagt
aacataatcaccactaacggcagattttctgtctctaatagtgagcccccaaaggagtac
ccaggggtttctatttttcctagaggtgtacctcttccccaagctaccccttttcttcac
tcacatctctatgagtctcttcccatcggtcagccagccagtctgtttggagtacctcct
cggttttcatttcagcacccttactttgtacctggacctcactatttcccctcaagcacg
tgcccattcagccgacctccatttggctgtgggagtttctccagctcagtgcctgaatgc
cttggcttttatgaagacaggtaccaaagacaggaggtgatgttttcagctctggacaga
gactgtcctttcaaggaatacccagaagaaagtatacgtgagggccgccgcaggtgtgag
agccttgaagtagtgtcctgtcacagcagctgcaacgaggagcggtatttaagcccccta
ccacagctggacgttggagcattggaggaggttttgtcagccacctcatccactccctcc
agcatccacctagtcaatgtaactgacagcgatgaggaagaagaagtaaagttgttgcga
gaattgtaa
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