Gymnogyps californianus (California condor): 127022262
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Entry
127022262 CDS
T08687
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04120
Ubiquitin mediated proteolysis
gcl04137
Mitophagy - animal
gcl04144
Endocytosis
gcl04340
Hedgehog signaling pathway
gcl04350
TGF-beta signaling pathway
gcl04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127022262
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127022262
04350 TGF-beta signaling pathway
127022262
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127022262
04137 Mitophagy - animal
127022262
09144 Cellular community - eukaryotes
04520 Adherens junction
127022262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127022262
04121 Ubiquitin system [BR:
gcl04121
]
127022262
03029 Mitochondrial biogenesis [BR:
gcl03029
]
127022262
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127022262
Membrane trafficking [BR:
gcl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127022262
Autophagy
Mitophagy
Other mitophagy associated proteins
127022262
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
HECT type E3
127022262
Mitochondrial biogenesis [BR:
gcl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127022262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
127022262
NCBI-ProteinID:
XP_050761710
LinkDB
All DBs
Position
15:4309117..4352564
Genome browser
AA seq
732 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDTTGAAGGGNCRFVESPSQDQRLQAQRLRTPEVRGHVQTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQKLKVL
RHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAR
EWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHY
INGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRI
LQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQ
KELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGST
RVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLL
TAVEETCGFAVE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccggtacccgccggaacggctccagcatcaagatccgcctcacagtatta
tgtgccaagaatcttgcaaagaaagatttcttcagacttcctgacccattcgcaaaaata
gttgttgatgggtcaggtcagtgccattcaactgacactgtgaagaacacattggacccc
aaatggaaccagcattacgatctatatgttgggaagacagattctataaccatcagtgta
tggaaccataaaaaaatccacaagaaacagggagctggcttcctggggtgtgtccgactc
ctctccaatgccatcagcaggctaaaagatactggataccagcgtttggatctatgcaaa
ctaaatcccacagataccgatgctgtacgaggccaaatagtggtcagtttacagacacgg
gacagaataggcacaggaggttctgtagtagactgtagagggcttttggagaatgaagga
acggtttatgaagattctggaccgggaaggccgctgagctgttttatggaagaaccagca
ccgtatacagacactacgggggctgctggcggaggcaactgtcgcttcgtggagtccccc
agtcaagatcagaggcttcaggcacagcgacttcggactcctgaagtcagaggtcatgta
cagacacctcagaacagaccgcacggtcaccagtcgcctgacctaccagaaggctacgaa
caaagaacaacggtacagggacaggtttattttttgcacacacagactggagttagcaca
tggcatgaccctaggataccaagagaccttaacagtgtgaattgcgatgaactaggacct
ttgcctccaggttgggaagttagaagtacagtttcaggaagaatatattttgtagatcat
aacaacagaaccacacaattcacagatccacgactacatcacatcatgaaccatcaatgc
cagctaaaagagcccagccagcagcctctgccagctccaaatgagggctcactagaagac
ggtgaggagttgcctgcgcagagatatgaacgagacttggtacaaaagttgaaagttctt
agacatgagctctctcttcagcaaccacaggctggtcactgtcgcattgaagtatccaga
gaggaaatatttgaggaatcctaccgtcagataatgaagatgaggccaaaggacttgaaa
aagaggcttatggtgaaatttcgaggagaggaaggcctggattatggaggagtagcaaga
gaatggttgtatttactgtgccatgaaatgttgaatccctattatggactcttccagtac
tccacagataatatttacatgctgcaaatcaatccagactcttctatcaatcctgaccat
ttgtcttatttccattttgttggtcggataatgggtttggctgtgttccatggacactat
atcaatgggggtttcacggttcccttttacaaacagctgctggggaagcccattcagctc
tccgatctggaatctgttgacccagaattacacaaaagtttagtctggatcttagagaac
gatatcaccccagttctggaccatacattttgtgtggaacacaatgcttttgggcggatt
ttacagcatgaactcaaaccaaatggcaggaatattccagtgacagaagagaacaagaaa
gaatatgtcaggttgtatgtaaactggcgatttatgagaggaatagaggcacagttcctg
gctctgcagaaaggttttaatgaacttattcctcaacatctccttaagcctttcgaccag
aaggaacttgagctaatcataggaggtctggataagatagacctgaatgactggaagtca
aacacacgtctaaagcactgcatggcagatagcaatattgtgaagtggttctggcaagca
gtggaaacatttgatgaagaaagaagggcaaggctgctgcagtttgtgacgggttcgacg
cgtgtcccacttcaaggtttcaaggctttacaaggttctacaggcgctgcaggacccaga
ctgtttaccatccatttaatagatgcaaacacagacaaccttccaaaagcccacacttgc
tttaaccggattgacattccgccttatgagtcatacgagaagctttatgagaagctgttg
acagctgtggaagagacatgtgggtttgctgtggagtga
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