Gymnogyps californianus (California condor): 127022414
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Entry
127022414 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127022414
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127022414
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
U-box type E3
127022414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
127022414
NCBI-ProteinID:
XP_050761961
LinkDB
All DBs
Position
15:complement(1100750..1132706)
Genome browser
AA seq
1776 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKATSKTYVISRTEPVSGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMTQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESEEHTCPTCH
QTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQQQQQQQPPPPPPPPPPLMRQTIT
RNLQPLLRPTISRQQDPLMIPLASLASRSAAALSSLAPGQSSVAAGLPVNPSSVVVSDLP
PAVSLSLRGEKPDGPFRDADTVIPPAALVTAAELSKSSPLSISSLLEEKGYQVPVLRQPA
LPSLLGPQGQSIPTTGHPMRASTIRSAGGRPGWELSSNRGRPHSERTQRTQAPTLPASTP
VFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAPANMSSA
WVPTAVPTAHSNAIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKK
IQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYP
RRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQGEGEREY
FNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQPRPPVN
RENFSPDRFGPPGTRRENSPYARGRREDYPGGQSHRNRNIAGNYPEKPSGRESHGIKDPT
KSKEKEVENPLGDSKGNKHKKHRKRRKGDENEGFPNAELLEGARKPREPVTAEDVKTESL
FMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKIDKTKRKVEVAVPPKKDNT
IKPAKASQEKVDTDREKSPRTEPPVKKVKEELPKTDSVKTSSSQKDEKALGTPRKVHPKV
TKDHPETRPAKEEKAKKDHPKETKSEKPSNKEDKSKKPAEKSKPPDAKPEKRKRKADEKV
DKEHEAASIKASKPETAESKASPKGKTEPDGEKGERTPEKDKSAFLNNPAKKIKLNRETG
KKIVSGENVPPAKEPVEKPEPSSSKVKQEKAKGKVRRKVTAADGSSSTLVDYTSTSSTGG
SPVRKTEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEEDIKST
QVPANVGKPASVIKNVSAKPPNPVKHNEKETEPLEKIQKTTKEASYESSQHDAKSSKSSM
SNEKGKTKDRDHSLSDKDTSEKRKSSVQPEKDHSERATEQGNGKNTSQSSKDSRSAEKHD
TGRGPTAKDFTPNRDKKSDHDGNRDHSSSKRRDEKSELARRKDSPSRNRESTSVQKSKPR
DERAEPSKKGAGDAKRSSYSPPRERKQSDHKAAHDSKRTSEEHKPLDKNAGKEKEKHVPE
VKSNKEKEPGGNKPPLRQESPDVKNEKENVTGQNDKSVVKPKPQVSSSSRLSSDLTRETD
EAAFVPDYNESDSESNVSAKDEEAAGKNPKEPKEKAVDKAKEDTAAPAAADQPEASRSQS
QSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKHKKHKKHKKHIG
NETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVST
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtccactacaagttctcctcgaagctgaactatgatacggtcaccttcgac
ggcctccacatctccctgtgcgacctcaagcgccagatcatgggccgcgagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcccagaccaaagaagaatacaccgatgat
aatgccctgattcctaagaactcatcagtaattgttagaagaatccctattggaggagtt
aaagctaccagcaaaacatatgttataagtcgaactgagccagtgagtggaacatcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttactaagactgccaatctg
gctgaagccaatgcttccgaagaagataaaataaaagctatgatgacacagtctggccat
gaatatgatccaatcaattatatgaagaaacccttgggtccacctccaccatcgtatact
tgctttcgttgtggaaaacctggccactatataaagaactgcccaacaaatggggacaaa
aattttgagtctgttcccagaattaaaaagagcacaggaattccaaggagtttcatgatg
gaggtgaaagatcccaatacaaagggtgctatgctgacaaacactggaaaatatgcaata
ccaactattgatgcggaagcttacgctataggaaagaaggagaagcctccctttttacca
gaggagccgtcctcctcctcggaagaagatgatcctattccagatgagttgttatgtctc
atttgtaaagatataatgactgatgcagttgttattccctgctgtggaaacagttattgt
gacgaatgtattagaacagcattactggaatccgaggaacatacatgcccaacgtgtcat
cagacggatgtttctcctgatgctttaattgccaacaagttcctacgccaggctgtgaac
aacttcaaaaatgaaactggctacacaaaaaggctccgtaagcagattcagcagcaacaa
cagcagcagccgccgccgccaccaccacctccaccacccctaatgagacaaacaataaca
cgcaacctgcagcctctactccggccaacaatttccagacagcaggatccactaatgatt
ccgttagcttctctggcttctcgttctgctgctgctttgtcatcgttggcccctggtcag
tcatctgtggcagctgggctgccagtaaatccatcttctgttgttgtctctgatctccct
ccagcagtgtccctatctctccgtggtgaaaagccagatggaccttttcgcgatgccgat
actgttatacctcctgctgctctggtgacggctgctgaactttctaaatcttcccctctg
tcaatcagcagtttgttggaagagaagggctatcaggttcctgtactaagacaaccagca
ttaccaagtcttctgggccctcaaggacaatcaatacccacaactggtcatcccatgaga
gccagtacaattcgctcagcaggtggcagaccaggctgggaactaagttcaaatcgagga
cgcccgcacagtgaacgtacccaaaggactcaggccccaacactaccagcatcgacacca
gtctttgtgcctgtgcctccacctcccttgtatcctccaccgccccatgcactgcctctt
ccacccggggtaccaccaccacagtttcctcctcagtttccacctggtcagcctccatct
gctgggtacactgtcccccctccaggatatcccccagctcctgcaaacatgtcatcagct
tgggtaccaacagcagtaccaacggctcattcaaatgccatcccaacgacacaagcaccc
cctttatctagggaggagttttacagagagcaacggagacttaaagaggaggaaaagaaa
aagtccaaacttgatgagtttacaaatgattttgctaaggaattgatggaatataaaaag
attcaaaaggagcgtaggcgttcgttttccaggtccaagtctccctatagtgcttcatct
tactctagaagttcgtatacctactccaagtcaagatcaggttcttcccgctctcgctcc
tactctcgatcatttagtcgttcccattctcgttcctactcgcgatcgccgccatatcca
agaagaggcaaagggaagagtcgtaactatcgttctaggtcaaggtcacatggctatcac
cggtcaaggtcaaggtcacccccatacagaagataccattcacggtcaaggtctccagta
tttagaggccagtctcccactaaacggactgtacctcaaggggaaggagaaagggagtat
tttaacagatacagagaagttccaccatatgatatgaaagcttactatggcagatctgtt
gactttagagatccgtttgaaaaggaaagatacagagaatgggaaaggaactatagagaa
tggtatgaaaagttttacaagggctatgctgttggcgcgcaacctcgacctccagtaaac
agagagaacttttctccagataggtttggtccacctgggaccagacgagagaattcgcca
tatgctcggggacgtagggaggattatcctggtgggcagagccatcgaaatcgtaatata
gctggaaattaccctgaaaaaccttctgggagagagagccatggcatcaaagatcctaca
aaatcaaaagagaaggaggtggaaaatccactgggagatagcaaaggaaataaacataaa
aaacaccggaagagaagaaaaggggatgagaacgaagggtttcccaatgctgagttgtta
gaaggtgcgagaaaaccaagagagccagttacagcagaagacgttaaaacggagtctctg
ttcatgctccccagcagagatgatgccacccctgtgagagatgagcctatggaagcagat
tctattgctttcaaaccggtgtctgaaaaggagaaaaaagagaaggataagccaaaagca
aaaattgacaagacaaagcggaaagtggaagtggctgttcctcctaagaaagacaataca
ataaaaccagctaaagcttcccaagaaaaggtggacaccgatcgtgaaaaatctcctcgg
acggaacctcctgtgaaaaaagtgaaggaggagttgccaaagacagacagtgttaaaaca
tcttcctctcaaaaggatgagaaggctcttggtaccccgcggaaggttcaccccaaagtg
acaaaagatcacccagaaaccagaccagccaaggaggaaaaggcaaagaaagaccatcca
aaagaaaccaagtcggaaaagccctccaacaaagaggacaagtcaaaaaaacctgctgaa
aaaagcaaaccgcctgatgcaaaacctgaaaaaagaaaaagaaaagcagatgaaaaggtt
gataaagaacacgaagccgcttccataaaggcctctaaaccagaaactgctgaatcgaaa
gcatcgccgaaggggaagactgagcctgatggtgaaaaaggagagcgaactccagaaaag
gataaatctgcttttcttaacaaccctgcaaaaaagattaaacttaaccgagaaactggc
aaaaagattgtgagtggagaaaatgtaccacctgcaaaagaacctgttgagaaacctgag
ccaagcagcagcaaagttaaacaagaaaaagcgaagggaaaagtgaggagaaaagtaaca
gcagctgatggatctagttcaactcttgtagattacaccagcactagttctactggagga
agccctgttagaaagactgaagaaaagccagatacaaaacgaactgtcattaagaccatg
gaggagtataataatgatataacagcccctgctgaagatgtcattattatgatccaggtc
cctcagtcaaagtgggataaagatgactttgagtctgaagaggaagacattaaatctacc
caggtgcctgcaaacgtaggaaaacctgcgagtgttataaaaaatgtgagtgctaagcca
ccaaatcccgtaaaacacaatgaaaaagagacggagcctttggagaagatacagaaaact
acaaaagaggcgagttatgaaagctcccagcatgatgcaaaaagttcaaaaagttctatg
tcaaatgaaaaaggaaaaaccaaagaccgggatcattctttgtcagacaaggacacttct
gagaagagaaagagcagtgttcagccagaaaaagaccactcggaacgtgcaactgaacaa
ggaaatgggaaaaatacttctcaatcttccaaagacagcagatctgcagagaaacatgat
actggccgtggacccactgctaaagactttactccaaaccgagacaaaaaatctgaccat
gatggcaacagagatcattctagttccaagcgtagagacgaaaaaagtgaattagcaagg
agaaaagactccccttctcgaaacagagaatctacatcagtacagaaaagtaagccgaga
gacgaacgagcagagccgtccaaaaagggcgctggagatgccaaaaggagcagctacagt
cctccgcgtgagaggaagcagtctgatcacaaagctgctcacgattccaagcgtacatcg
gaggaacacaaacctctagataaaaatgcaggaaaagagaaagagaagcatgtaccagaa
gtaaagagcaataaagagaaagagccaggtggtaataaaccacctttgagacaagaatca
ccagatgtaaaaaatgagaaagagaacgtgactggacaaaacgataaaagtgttgtcaag
cccaagcctcaggtaagcagctcctcacggctctcctctgatctaactcgagagactgat
gaggctgcatttgtaccagactacaatgaaagtgacagtgagagtaatgtgtctgcaaaa
gatgaggaagctgcaggaaaaaatccgaaagaaccgaaagaaaaggctgttgataaggcg
aaagaggatacggcagcacctgccgcagctgaccagcctgaagcgagcagaagtcaaagt
caaagcagtcccagcgtcagccgcagccgtagtcaaagcccttctgagagtcagactcga
agccacagcagcagtgccagctcaggagagagtcaagacagcaagaaaaagaaaaagaaa
aaagagaagaagaagcacaagaagcataagaaacacaagaagcataagaaacacattgga
aacgaaacggaattggaaaagagccaaaaacacaaacacaagaagaaaaaatcaaagaag
agcaaagataaagagaaggatgaccaaaaagtgaaatctgtcagtacatag
DBGET
integrated database retrieval system
