Gymnogyps californianus (California condor): 127022499
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Entry
127022499 CDS
T08687
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127022499
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gcl01001
]
127022499
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gcl04054
]
127022499
Enzymes [BR:
gcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
127022499
Protein kinases [BR:
gcl01001
]
Serine/threonine kinases: Other
TAF1 family
127022499
Pattern recognition receptors [BR:
gcl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127022499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
NB-ARC
nSTAND_NTPase5
NPHP3_N
AAA
nSTAND3
RsgA_GTPase
AAA_19
AAA_22
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
127022499
NCBI-ProteinID:
XP_050762084
LinkDB
All DBs
Position
15:complement(12812214..12844914)
Genome browser
AA seq
1216 aa
AA seq
DB search
MNLFKEILPRVRKILSTATASDDHALLNLMLKEDLISKEYHQALLHEKDREDLARKISLT
FVEKWDLYLNTLVPLCCLNLHGSKPQNMTDNEPTGSKYISDSKRQIMDSAFVSENGYLDL
LHSDIDPLHLYTLLDPKSSGNEEGDFSTDPEVDASNYDQFSNTDFLCTMENCENGDELYL
CSNTIEAYARIAELAEYVLKDQQEKQVEDTFAGNLILDEMAAENTEKFTDIKMQKCHKRT
FLGSAESCSGASEPKYKKIVEVPAVSAGNGSFLAMPLNSHPASSTSLTKQHMSFSVPATN
ALERSFVIPVSGSSAPLIPECLPVGVKGSQENTGFADPPQQILNFVLGYGTSDVIIYPVL
TSSTETLVSPSFPVSLCGLEMFKEVRVPIIPSEEPFKRPKPVEAFCTSLMDYFRDVCKSV
AMEREVTLDHLFIDGTLVQSQTETKTGKNSVKAMEKELVTCSLQGKEKAALKRSQIFQIP
GGKDLETKVIVVLGKAGTGKSILVQKICQDWSNGEFSQFEFVFWFDCKQISFPEKRYSLK
DLLLEFFVKPQEGSKEIFEYILQNPAKVLLVFDGFEGLHDHENFPRCSASQPEKDLYSIK
ELLSGLIQKKILNGCTLLLTARPKDKVYQYVSKVDKTIEIVGFSSQQRELYITKYFEGLP
YCDNALKLIKECEYLFSHCYSPVMCRFVCFLCETVLEMGDKSLPSTLTTVFLKFVQQKII
PMQTDVIAMQNQESLATLARIAWYFGEKHRSAMKSDLLPSKEVKEFALKYGFFLPFAFPR
HSDSGEEEFGSTFSDFVIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKTYNWLDLVPR
FLAGLLFLQDDPYFCSLSNTDVKQSTKKQKALLKYIRRLQINELCPERLLELLHCVYETQ
SNYLLQHVALRLKPDLSFLGIVLTPPDVHVLHSILKRSRKEFSLDLRNSSIDMQGIKDLV
GLKNVASFRASLSDTVRLWKLLEQTKDYELLRASTEKFVLDPFKAKTMKDISDLSDLVEM
QEKMINCVQDASGCSSYEIPAIKNLRKLEFALGPVCGLQGFLKLVEILAAFPSLQHLDLD
ALSENGIGDEGAKSLSEVFSTLTSLETLNLSQNKITDVGAEKLATALPSLTSLKTLSLYN
NSICDFGAENLAKVLPAMASLRVLDVQYNKITGVGAQQLTDSLRKCPHIKNLVMWNPTIP
YGVLEHLQQLDSRISV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctttaaggagatcctgcctagagtaaggaaaattctttcaactgctacagct
tctgatgaccacgcattgcttaacctcatgctgaaagaagatctgatatccaaggagtac
catcaagccttgctccacgaaaaagacagagaggaccttgcaaggaagatatctctgacg
tttgtggaaaaatgggacctgtacttgaacactttggttcccctctgttgtttaaacctc
catggcagtaagcctcaaaacatgacagataatgagccaacaggaagcaagtacatttct
gacagcaagagacaaatcatggattcagcatttgtgtctgaaaatggctatctcgatttg
ctgcacagtgatatcgatccattgcatctatatactctccttgatcctaagtcatctgga
aatgaagaaggtgacttctctacagatcctgaagttgatgccagcaactatgatcagttc
agtaatacagatttcctgtgtacgatggaaaattgtgaaaatggggatgaattatatctc
tgttccaacaccatagaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatcagcaggagaagcaggtggaagacacttttgcagggaaccttattttggatgaaatg
gctgctgaaaacactgagaaatttactgacataaagatgcagaaatgtcacaaacgaacc
ttcttaggctctgcagagagttgctctggtgcttcagaacccaaatacaagaaaattgtg
gaagtccctgcagtgtctgcagggaatggcagttttctagctatgcctctcaacagccat
ccagctagctccacttcactaactaaacagcacatgtccttttctgttcctgctaccaat
gcgttggaaagaagtttcgtaattcctgtttcaggatcttcagcacctttgattccagag
tgtctacctgttggagtgaaagggagccaagagaatacaggctttgcagatcctcctcag
cagatactcaactttgttcttggatatggcacatctgatgttataatatatccagtgctg
acttcttccacggaaacattggtatccccaagttttccagttagtttatgtggtttagaa
atgttcaaagaagtccgagttcccataattccttctgaagaacctttcaaaagaccaaag
ccagtggaagctttctgtacatcacttatggattatttccgagatgtgtgcaaatctgtg
gccatggagcgtgaagtaactcttgatcacctgtttattgatgggacacttgttcaaagc
caaactgaaaccaagactgggaagaatagcgtaaaagcaatggaaaaggagctggtaact
tgcagtctgcaagggaaggaaaaggcagcgcttaaaagaagccaaatatttcaaatccca
ggaggtaaagacttagagactaaagtgattgtggtgctgggaaaagcaggaacgggcaaa
agcattcttgttcagaagatctgccaggactggtccaatggagagttttctcaatttgaa
tttgtattttggtttgactgcaaacaaataagcttccctgagaagcgatatagcctgaag
gatctgcttcttgaattttttgtaaaacctcaagagggaagcaaagagatctttgagtat
atattgcaaaatcctgctaaagtccttctggtttttgatggttttgaagggttgcatgat
catgagaattttcctcgctgctcggccagccagcctgaaaaagacttgtacagtataaag
gagctgctttcaggactcatccaaaaaaagatactcaatggttgtactttattacttaca
gcaagaccaaaagacaaggtgtaccagtatgtgtccaaagtggataagactattgaaata
gtaggattttcctctcagcagagagaattgtacataaccaaatacttcgaaggattaccc
tactgtgataatgcactgaaattaatcaaagagtgtgagtacttgttcagtcattgttac
agccctgttatgtgtagatttgtttgttttctctgtgagacagtacttgaaatgggagac
aaaagccttccttcaactcttactacagtcttcctgaaatttgttcagcaaaagataata
cctatgcaaacagatgttatagccatgcaaaatcaagagagtcttgctacgctagcccgt
attgcttggtattttggagaaaagcaccgaagtgccatgaaaagtgatcttcttccttct
aaggaagttaaagagtttgctctgaaatatggatttttcctgccatttgcattccccagg
cattcagatagtggagaagaggaatttgggagcacattctctgattttgtcattcagaat
ttcttgggtgcgcttcaccttatgttagcagaagagatcaaggataaaagtctaacaaag
tacctgtcttttccatccaagaagaaaaaaacttataactggttagatttagtgcctcga
tttttggctggattgttgtttctccaggatgacccctacttctgctccctttcaaatacg
gatgtaaaacaatcaaccaagaagcagaaagcactcttgaaatatattagaaggctgcag
ataaatgagctctgtccggagaggttacttgagcttttacattgtgtttatgaaacacaa
agcaattatcttttgcagcatgtggccttaaggctcaagccagacctgtcttttctgggc
atagttcttacaccacctgatgtccatgtactgcactctattttaaaaaggtcaagaaaa
gagttttccttggatttgcgaaacagcagcattgacatgcaagggataaaagacttggtt
ggcctaaagaatgtggcatcattcagggcctctctcagtgatacagtcaggctctggaaa
ttgttagaacagacaaaagactacgaactgctgagagcatcaacagagaaatttgttctt
gatccctttaaggcaaagacaatgaaggacatcagtgacctttcagaccttgtagagatg
caggagaagatgatcaattgtgtgcaagatgcatctggttgcagcagctatgaaattcct
gccatcaaaaacctcagaaaactagaattcgcgctgggtccagtatgtggccttcaggga
ttcctaaaacttgtggaaattcttgcagcatttccatcacttcagcatttagacctggat
gctctgagtgaaaatggcataggagatgaaggagcaaagagtctatctgaagtcttttca
accctgacatcactggaaacattaaacttatcacagaataagataacagatgtgggtgca
gagaaattagctacagctcttccttccttgacttcgttaaagacactaagcttatacaat
aatagcatttgtgattttggagcagaaaatcttgcgaaagttcttcctgcgatggcatct
ttaagagtgctagatgttcagtataacaaaataactggtgttggagcccagcagctgact
gacagcctacgaaaatgtccccatataaagaacttggtgatgtggaatcccaccattccc
tatggagttctcgaacaccttcagcagctggactctaggatcagtgtgtag
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integrated database retrieval system
