Gymnogyps californianus (California condor): 127022630
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Entry
127022630 CDS
T08687
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03440
Homologous recombination
gcl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127022630
03460 Fanconi anemia pathway
127022630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcl03032
]
127022630
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127022630
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127022630
DNA replication proteins [BR:
gcl03032
]
Eukaryotic type
DNA Topoisomerases
127022630
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127022630
FA (Fanconi anemia) pathway
127022630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
127022630
NCBI-ProteinID:
XP_050762247
LinkDB
All DBs
Position
15:3295794..3306989
Genome browser
AA seq
1019 aa
AA seq
DB search
MNFGARQFASCGVRMLPQPWRLFSRAAEDTALQRIRKVLCVAEKNDAARGIADLLSNSRM
RRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKLPFRKWHSCNPLALFDAEI
EKYCPENYVDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARF
SEITLHAVRTACENLTQPDRKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVVFNWKRNRLFNHTACLV
LYHMCMEDPVATVVEVVSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQG
FISYPRTETNIFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRSGTKSDQAHPPIH
PTKYAANLQGNEQRLYEFIVRHFLACCSQDAKGQETIVEIDIANERFIAQGLMILARNYL
EVYPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATH
AEHIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKSAVLQQQVQKYKQVFIEAVARANKLDQALAQYFGEATEIAEQEEVYPAMPVSVRKC
PQCNNDMVLKTKKNGGFYLSCTGYPACKTAVWFPDFVLDVARDESICAVCKPHPVHRLKF
KFKRGSVPPVVPLEFVGCIGGCDDMLKELLDLKYLHRSSQPASSASQQANHLQVNNSFNR
ASGENRHVRGTTNLAPGHLLSLSSTRTPRPAPSAARDDGNNAVVCNCGNEALLLTVRKEG
PNQGRQFYKCSASTCNFFLWADQQAEDRSNAALRGSALPQPFAGRGPAGFQRPGGGRGPD
LFGSNSSDSGGGTVCKCDQPAVTRTVQKDGPNKGRQFHTCPKPREQQCGFFQWADENVAP
GPSGDVSLNHFGSSDYSRGLGSKAKRPSSLSSEAAAKKPRTCSICHQPGHTRKTCPQNN
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcggagcgaggcagtttgccagctgcggggtcaggatgctgccgcagccctgg
cgtctcttctcccgggctgcggaggatacggcattgcagaggatccggaaggtcctgtgc
gtggctgagaagaacgatgctgcccgagggattgcagatctgctctccaacagcagaatg
cgacggcgagaagggttttccaagttcaacaagatctacgaatacgactaccagatgttt
ggccagaacgttactatggtgatgacatccgtgtcgggacacttactggctcatgatttt
aagctgccgtttcgcaaatggcatagctgcaaccctctagctctttttgatgctgaaatc
gagaaatattgccctgaaaattatgtggatatcaagagaaccctcgaacgagaagtccag
cagtgccaagctctggtgatctggactgactgcgatcgagaaggagagaacattggcttt
gagataattcacgtttgcaaagctgtaaagccaaacctccaggttttccgagcccgtttt
tcagagattacgcttcatgctgtcagaacagcttgcgagaacctcacccaaccggatcga
aaaacgagtgatgccgttgatgtcaggcaggagctggacctcaggataggtgctgccttc
accagattccagacactgaggctccggaagatcttccctgatattttagcagatcagcta
atcagctatggtagctgccagttcccaacgctggggtttgtagttgaacgctttaaagcc
atccaggcctttgttcctgaagccttctataaaataaaagtgacacatgatcatgaagac
ggcagtgtggtcttcaactggaagaggaaccggctctttaatcacacagcatgcctggtc
ctttaccacatgtgtatggaggatcctgtggcaactgttgttgaggtggtgagcaagcca
aagagcaaatggaggcccctgcccctggacactgtggaacttgagaagctggcttcccgc
aaactgaaaataaacgcaaaggaaaccatgagaatagcagaaaaactctatactcaaggg
ttcattagctacccccgaactgagaccaacattttccccaaggagctgaacctctctgcc
ttagtacaacagcaaacacaggacccaaactggggagcatttgcacagaggattttggat
cagggtgggccaacccctcggagtggaaccaaatcagatcaggctcaccctcccattcac
cccacaaaatacgctgctaacctgcagggcaacgagcagagactatatgaattcatcgtg
cgtcattttttggcttgctgctctcaagatgccaagggacaggaaacaattgtggagatt
gacattgctaatgagcgattcattgctcaaggactaatgatcctggcccgaaattatctg
gaagtctatccttatgagaagtggagtgataaggttatcccactgtatcagaaagggtct
cgctttcagcccactacagtggagatggtggatggggaaaccagccctccattgctcctc
acagaagcggatctcattgctctcatggagaaacatggcattgggactgacgccactcac
gccgagcacattgagacgattaagacgcggatgtacgtgggccttacagcggatcagcgg
ttcctcccaggccacttgggcatggggctggttgaaggctatgattccatgggctatgag
atgtccaagcctgaccttcgagctgagctggaggctgatctgaaactgatctgtgagggc
aagaaagacaaatctgcagtgttgcagcagcaggtccaaaagtacaagcaagtcttcatc
gaagctgtggccagagctaacaagttggaccaggccctggctcagtattttggagaagcc
acagaaattgcagagcaagaggaggtctacccagcaatgcccgtttctgttcggaagtgt
ccacagtgcaacaatgacatggtcctgaagaccaagaagaatggcgggttctatctcagc
tgcacgggctatccagcttgtaaaactgcagtctggtttcctgattttgtgctggatgtg
gccagggacgagagcatctgtgctgtgtgtaaaccacatccagttcacagactgaagttt
aaattcaagagaggcagcgttccacccgtggtgcccctggagtttgttggttgcattggc
ggctgtgatgacatgctgaaagaactcttggacctgaagtatttacacaggtcgtcccaa
cccgcatcgtcagctagccagcaagctaatcatttgcaggtcaacaactcctttaacaga
gctagtggtgaaaacaggcacgtgagggggaccacaaacctggcaccaggacatttactc
tccttgagctcaacgagaacacccaggcctgctccttcagctgctcgagacgacgggaac
aacgcggtggtctgcaactgcgggaacgaagccctgctgttaaccgtgcgcaaagaaggg
cccaatcaaggcaggcagttttacaaatgcagcgccagtacctgcaacttttttctctgg
gccgatcagcaggcagaggacagaagcaacgcggctctgcggggctctgcgctaccccag
ccctttgcaggaaggggcccggcgggatttcagcgcccaggaggagggagaggcccagac
ctctttggaagcaacagctccgattcaggaggcggcacagtctgcaagtgcgaccagcca
gccgtcacgcgcaccgtccaaaaggacgggcccaacaaagggcggcagttccacacctgc
cctaaaccccgagagcagcagtgtggcttcttccagtgggcagatgaaaacgtggcacca
gggccttctggagatgtctctttgaaccactttggcagcagtgactactcaagagggttg
ggaagtaaagccaagagaccaagcagtctctcctcagaagctgctgccaagaaaccacgg
acctgtagcatttgccaccagcctggccacactaggaaaacctgccctcaaaacaactga
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