Gymnogyps californianus (California condor): 127022846
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Entry
127022846 CDS
T08687
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gcl03009
]
127022846
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127022846
Ribosome biogenesis [BR:
gcl03009
]
Eukaryotic type
Pre-60S particles
Helicases
127022846
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
127022846
NCBI-ProteinID:
XP_050762604
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All DBs
Position
16:complement(12946451..12955154)
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AA seq
597 aa
AA seq
DB search
MEAVTEGSWESLAVALSPGVLQALRELGFARMTPVQSATIPLFMNNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQIGAIIITPTRELAIQIDEVLSHFTKHFPRFSQILLIGG
RNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGMAASNTQKTPT
RLENYYMICKADEKFNQLVHFLRQHKREKHLVFFSTCACVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKPQTNVLDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKMPELRGKCFPDFTPVTVN
TDSISFKDKNREKQRQKQLEQQRKERQENGGKKKFIKNKAWSKQKAKREKKKKITAKRKH
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGSQNRLKVETVADLESEG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgactgaggggagctgggagtcgctggccgtggcgctgagtccgggcgtg
ctgcaggcgctgcgggagctcggcttcgcccgcatgactccggtgcagtctgcgaccatt
ccacttttcatgaataacaaagatgttgccgcagaagcggtaacaggcagtggcaaaacc
ttagcatttgtaattcccatactggaaattcttctcagacgggaagaaaaattaaagaaa
atgcagattggagctataattatcacaccaacgagagaattagctattcaaattgatgag
gtgctatcacatttcacaaaacacttccccaggtttagtcagattcttttaattggtggt
aggaatcccatggaagatgttgaaaagtttaaagaacatggtgggaacatcattgtagct
acaccgggccgcttggaggatctgttcagaagaaaagcagatgggctggatctagcaagt
tgtgtgaagtctcttgatgtgttggtattggatgaagcagacaggcttctagatatgggc
tttgaagcaagtttaaatgccattctggactttttgcccaagcagagacggacaggtctg
ttctcagcaactcaaactcaagaggtggagaacctggtgagagcaggtctccggaatcct
gtccgcatctcggtgaaagagaagggaatggcagcaagcaacacacagaaaactccaaca
cgcctggagaactattatatgatctgcaaagcagatgaaaaatttaatcagttggtgcat
tttcttcgacagcacaaacgggaaaaacatctagtctttttcagcacgtgtgcctgcgtg
gaatactacgggaaggctttggaatccttaattaaacaagtgaaaataatgagcattcat
gggaaaatgaaacacaagcgtaacaagatttttactgagtttcggaagctcccaggtggc
attttagtttgcactgatgtgatggcccgtggcatagacattccagaagtacactgggtt
ttacagtatgacccacctagcagtgcaagtgcctttgtgcatcggtgtggtcgaacagca
cgcatcggcaatgtaggcagtgcacttgtatttttgcttcccatggaagaatcttacatt
aactttctctcaatcaaccagaagtgtcccatgcaggaaatgaaaccacagacaaacgtg
ttagatcttcttccaaaactgaagtccatggccctagctgacagggcagtgtttgagaaa
gggatgaaagcatttgtgtcttacgtccaggcttatgccaaacatgaatgtaatctgatc
ttccgaataaaagatctggattttgctagccttgccaaaggttttgcattgttaaaaatg
ccaaagatgcctgaactaagaggaaaatgttttccagactttactccagtcactgttaat
acagactccatttcatttaaggataaaaatagagaaaaacagagacaaaagcaattagaa
caacaaagaaaagaaagacaggaaaatggagggaaaaagaaattcataaagaacaaagcc
tggtcaaagcagaaagccaagagggagaagaaaaagaaaataacagctaaaaggaagcat
gaagagggctctgatattgaagatgaggatatggaagagctgctgaatgacacaagactc
ttgaaaagattaaaaaagggaaaaattagtgaagaagagtttgagaagagactaacaggc
agccagaatagacttaaagtggaaactgttgccgacttggagtctgaaggttga
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