Gymnogyps californianus (California condor): 127022959
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Entry
127022959 CDS
T08687
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127022959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gcl03041
]
127022959
03110 Chaperones and folding catalysts [BR:
gcl03110
]
127022959
04121 Ubiquitin system [BR:
gcl04121
]
127022959
Enzymes [BR:
gcl01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
127022959
Spliceosome [BR:
gcl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127022959
Complex C
U4/U6.U5 tri-SnRNP related factors
127022959
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
127022959
Chaperones and folding catalysts [BR:
gcl03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
127022959
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
U-box type E3
127022959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
V-set_CD47
DUF7715
Motif
Other DBs
NCBI-GeneID:
127022959
NCBI-ProteinID:
XP_050762797
LinkDB
All DBs
Position
16:complement(6962282..7038026)
Genome browser
AA seq
534 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTQFYGGKKADLPRTNFRRLSFDHCSLSLQPFEYPVCTPDGTV
FDILSIVPWIKKYGTNPITGEKLDAKSLIKLNFAKNSEGKYHCPVLFTVFTNNSHIVAIK
TTGNVFAYEAVEQLNIKPKSYKDLLTDEPFTRQDIVTLQKSIGKRLGRRKVKDPTNLDKF
NVSNFFHVKNNIKVIDPDEEKAKLDPSYYLKNTNTETRETLLELYKEFKGDDILAATMKA
PEKKKVDKLNAAHYSTGAVSASFTSTAMVPETTHEAAAIEEDVVRYKYVKKKGYVRLHTN
KGDLNLELHCDMTPRTCENFIKLCKKNYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWG
KPFKDEFKPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTVFGRVVGGFETL
TAMENVESDPKTDRPKEEIRIQTTTVFVDPYEEADAQVAAEREKVQLEEEAAKTKAEVVP
PKKEVEAPKTYRQGIGKYINMAAAKRSVEDDGPSTSTAAKKEKKSAGFGDFSSW
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcggcagcaccagaaggacaagatgtacatcacgtgcgcggagtacacgcag
ttctacgggggcaagaaagcagaccttccacgaactaattttagacgtttatcgtttgat
cactgcagtttgtctctacagccatttgaatacccagtttgcactccagatgggacagtc
tttgacatactgagcattgttccttggataaagaaatatggaaccaatccaatcacagga
gaaaaactagatgccaaatcacttataaagctgaattttgctaaaaacagtgaaggtaaa
taccactgtccagtgctgtttactgtgttcaccaacaactcccatattgtggccatcaag
acaactggaaatgtgtttgcctatgaggcagttgagcagctgaacataaaaccaaagagc
tacaaggatcttttgacagatgagcccttcactcggcaagacattgtaacactgcagaag
agcattgggaaaagactgggtagaagaaaggtaaaggatccaacaaacctggataagttc
aatgtctcgaacttctttcatgttaagaacaacataaaagtaattgatccagatgaagaa
aaagcaaaattagatccatcttactatttgaaaaatacaaatacagagacccgagagact
ttactggagctttataaggaattcaaaggcgatgatattctagcagctactatgaaggct
cctgaaaagaagaaagtggataagctgaatgcagctcactattccactggagcagtaagt
gcttcctttacctccactgcaatggtgcctgaaactacccacgaagcagctgctattgaa
gaagatgttgtgagatacaaatacgtgaagaagaagggctatgtgcgacttcacactaat
aaaggagacctaaacttggagctgcactgtgatatgacaccccgaacatgtgaaaacttt
atcaaattgtgcaagaagaactattatgatggaacaatttttcacagatcaattcgtaat
tttgtgatccaaggaggtgatccgactggaacaggaacaggaggagaatcttactgggga
aaacctttcaaagatgaatttaagcccaatttgtcccacacgggacgtggtgttcttagt
atggccaattcgggacccaacacaaacaaatcacagttcttcatcacattccgctcttgt
gcatatctggacaagaagcatacagtttttggaagggtagttggtggctttgagactctg
actgctatggagaatgtggaaagtgacccaaaaacagaccgtcccaaggaggaaatacga
attcagacaacaaccgtttttgttgatccgtatgaagaggcagatgcccaggttgctgca
gaaagagagaaggtccagctagaagaagaagcagccaaaacaaaagctgaggtggtccca
ccaaagaaagaggtcgaggctcctaaaacttaccggcaggggattggaaaatacattaac
atggctgcagcgaagcgcagcgtggaagacgacgggccctcaaccagcacagctgcgaag
aaagagaaaaagagcgcaggcttcggggacttcagctcctggtag
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