KEGG   Gymnogyps californianus (California condor): 127022975
Entry
127022975         CDS       T08687                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
gcl  Gymnogyps californianus (California condor)
Pathway
gcl03030  DNA replication
gcl03410  Base excision repair
gcl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gcl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127022975
   03410 Base excision repair
    127022975
   03420 Nucleotide excision repair
    127022975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gcl03032]
    127022975
   03400 DNA repair and recombination proteins [BR:gcl03400]
    127022975
Enzymes [BR:gcl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     127022975
DNA replication proteins [BR:gcl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    127022975
DNA repair and recombination proteins [BR:gcl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      127022975
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 127022975
NCBI-ProteinID: XP_050762821
LinkDB
Position
16:complement(245870..278043)
AA seq 2284 aa
MPVLGGPTSPAAGADGAAPGRDDGPALSALKRLERSQRTDRLDALFGFERPAEPGERTGW
LINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKGCEREVSSFLSK
KFQGKIAKLETIPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVRKNRERDQ
ASDVYTAMLSSALSGGSLSTDEEGASRKVANQMDNIVDMREYDVPYHVRLSIDLKIHVAH
WYNVRYRGSTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDG
QGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIVTY
NGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGSH
NLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALC
TIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGG
HVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLRHAIEEEEGLPLDQVTNFQEVCDE
IKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGAN
CQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLSPEGAPRAFHELSREEQAKYEKKR
LADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAA
VETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANI
ITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVK
EGFTNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNED
GSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAA
NMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISK
KPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQ
KIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTLEGKRQVLANQPLE
GTPSSQIGDIEDFGAAKTLQPPVPIANKRKRVPAAEESQQMSQYLELSQSWREILGPPPP
LGTTKEERLVWLRYHQKKWELQARQRWERRKRRRLEDGGVTAGGGVVRDAFSKGLSSYLR
RTARSILDLPWQIVQIAETSQPGLFRLWAVIGSDLHCIRLSIPRVFYVNQRVPKPEEGAA
YRRVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLLRALIH
LGCVCMVSRQLVRHLAGREAETFDIEHLEMRSLAQFTYLEPGSIRHIYLYHSSQGSKALL
GLFIPSQRKAAIFVLDKVRSNQMPNLTTLFSAERSALLEKVGEELLPPDKHTFEVRAETD
PKAVYRAIQRLLLGYKDERRGPTLVAVQSNWDLKRLASGIPIVEEFPLVPIRLVDDISYS
VLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSDLFFSRHLRRH
NHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSLAVNTVL
QSHHINDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILKSMVV
SWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLG
SSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLWMDPA
NYGGIKGKVDSRIHYGEKDTSKRQVLEEEEDSEEEEEVGEEEEEEGDPNVEELLENSWNI
AQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRNAPGSTPVKRRSTSQVSQEALGEMG
AMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSRNATEPSDMFPVLPGSYLPLNNPAL
EFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEEAQFRDPCRSYVLPEVICRNCN
FCRDLDLCKDPALSQDGSVLPSWICSNCQAQYDSDAIEAALVEALQKKLMAFVLQDLVCK
KCHGVKETHMPVYCSCAGDFTLTISSQTFTDHVNVFQNIAQHYGMAHLLETIQWLLRTNP
QLRQ
NT seq 6855 nt   +upstreamnt  +downstreamnt
atgccggtgcttgggggacccacgagtccggcggcgggggctgacggcgcggcgcccggc
agggacgatggccccgcgctgtccgctctcaagcgcctggagcgatcgcagcgcacggac
cggctggacgcgctgttcggctttgagcggccagcggagcccggcgagcggacgggctgg
ctcatcaacatgcacccgacagaggtgctggacgaggaccggcggtcggtgagcgctgtg
gactactacttcatccaggaggatgggagccgcttcaaggtggccttgccctacaagccc
tacttctacatcgccacccagaagggctgcgagcgagaagtgtcctccttcctctccaag
aagttccaagggaagattgcaaagctggaaactatccccaaagaagacttagacctgcca
aaccacttggtgggcctgaagaggaactacatcaagctgtccttcaacacggtggatgac
ttggtgaaggtgaggaaggagatctctcctgccgtgaggaaaaacagagagcgagaccag
gcgagcgatgtctacacggccatgttgtcgagcgctctgagcggaggcagcctgagcacg
gatgaggaaggggcctccagaaaggttgccaaccagatggacaacattgtggatatgcgg
gagtacgacgtaccctaccatgttcgcctctccattgacctgaagatccacgtggctcac
tggtacaacgtgcgataccggggcagcacctacccccccgaaatcacccgccgagacgac
cttgtggagcgaccagatcctgtcgttctcgcctttgacattgaaactaccaaactccct
ttgaagtttcccgatgcggagacagaccagatcatgatgatctcctacatgattgatggg
cagggctacctgatcacaaacagggagatagtctctgaggacattgaagactttgagttt
acacccaagccggagtatgaaggtccattttgtgtctttaatgaaccagatgaagctcat
ttaatccagaggtggtttgaacatgtccaggagaccaaacccaccatcattgtcacatac
aatggagacttctttgactggccctttgtggaagcaagagcagcagctcatggaattaat
atgtatcaggaaattgggtttcagaaggacagccagggagagtacaaagcatcccagtgc
atccacatggactgtctaaggtgggtgaagagagacagttacctcccagtgggaagtcac
aacctgaaagcagcagctaaagcaaaactgggttacgatccagtggagctggaccctgaa
gagatgtgccggatggctacggaggagccacagaccctggccacctattcagtgtccgac
gcagttgctacctattacatgtatatgaagtatgtgcatcctttcatttttgccttgtgc
accatcattcccatggagcctgatgaggtgttaagaaaaggatctgggacactgtgcgag
gcactgctgatggttcaggcctatcatgccaacatcatcttccccaacaagcaggagcag
gaattcaacaaacttacagaagatggccacgtgctggactcggagacatacgtggggggc
cacgtggaagcgctggaatctggggtcttccgcagtgacatcccctgccgcttcaaaatg
aatcctgcggccttcgacttcctggtgcagcacgtggagaagacgctgcggcacgccatc
gaggaggaggagggtttgccgttggatcaagtcaccaacttccaggaggtttgtgatgaa
atcaaggtcaaactgaattccctgaaggacgttccgaacagaattgagtgtccccttatc
taccatctagacgtgggggccatgtaccccaacatcattctgaccaacaggttgcagccc
tcagccatggtggatgaggccacgtgtgctgcctgtgacttcaacaagccgggtgccaac
tgtcagcgccggatgacttggcagtggagaggagagttcatgcctgccagccgcagtgag
tatcaccgcatccagcagcagctggagtcggagaagttccctcctctgtcccccgaggga
gcaccccgcgccttccacgagctctcccgggaagaacaggccaagtatgagaagaagcgg
ctggcagattactgccgcaaggcgtacaagaagatccacgtcaccaaggtggaggaacga
gtcaccaccatctgccagcgagagaactctttctatgtggacacagtgcgagctttcagg
gaccgccgctacgagttcaaggggctgcacaaggtgtggaagaagaagctgtctgcagcg
gtggagacaggagacgcctctgaagtgaagcgctgcaagaacatggaaatcctgtatgac
tccctgcagctggcccacaagtgcatcctcaactctttctatggctatgtcatgcggaaa
ggagctcgctggtactccatggaaatggctggcatcgtctgcttcacgggagcgaatatc
atcacccaggccagggaactgatcgagcagattgggagacctctggaactggataccgat
gggatttggtgtgtcctccccaacagcttcccagagaactttgtcatcaagtcaaccaat
gccaagaagccgaaggtgacaatctcctacccaggtgccatgctgaacatcctggtgaag
gaaggcttcacgaatgatcagtaccaggaactgcaggacccagcctctctcacctacatc
acacgctcggagaacagcatcttttttgaagtggacggaccgtacctggccatgatcctc
ccagcttccaaggaggagggcaagaagctgaagaaaaggtacgcggtattcaacgaggac
gggtccctggccgagctgaagggatttgaggtgaagcgccggggagagctgcagctggtg
aagatattccagtcttctgtatttgaagcctttctgaaaggcagcaccctggaggaggtc
tacgcttctgtggccaaggtggccgattactggctggatgtgctctacagcaaggctgcc
aacatgcctgattcggagctgtttgagctgatctcagagaaccggtccatgtcgcgcaag
ctggaggactacggggagcagaagtccacctccatcagcactgccaagcgcctggcggag
ttcctgggggaccagatggtgaaggatgcagggctgagctgccggttcatcatttctaag
aaaccagaagggtctccggtcaccgagagggccatccccctcgccatcttccaagccgag
cccagtgtgcgcaaacactacctccgaaaatggctgaagagcccctcgctgcaggacttc
aacatccgcgcgatcctggactgggactactacatcgagagactgggcagcaccatccag
aaaatcatcaccattcccgcagccctgcagcaggtaaagaacccagtgccgcgggtccgg
cacccagactggctccacaagaaactcctggagaagaacgacgtgtacaaacagaaaaaa
atcaatgagctcttcactttggaaggcaagagacaggtcctcgccaaccagcccctggag
gggacacccagctcacagattggtgacatagaggactttggggctgccaagacccttcag
ccaccggttcccatcgcaaataagcggaagcgagtccctgcagcagaggaaagccaacag
atgtcccagtacctggagctatcccagtcctggcgagagatcctgggtccacctccgccc
ctgggcaccaccaaggaagagcggctggtctggctgcgctaccaccagaagaagtgggag
ctgcaggctcggcagcggtgggagcggcggaagaggcgacgtctggaggacggtggggtg
acagcaggtggaggagtggtccgcgatgccttctccaaagggctgagcagctacctgcgc
aggacagcacgcagcatcctggacttgccctggcagatcgtgcagatcgctgagaccagc
cagcctgggctgttcaggctgtgggcggtgatcgggagcgacctgcactgcatcaggctg
agcatcccccgggtcttctacgtcaaccagcgtgtcccgaagccggaggagggagcagcc
tacaggagggtgaacaggatcctgccccgctcaaacttagtttacaacctgtatgaatac
tccgtccctgaagacatgtaccaagagcacatcaatgaaatcaatgcagacctctctgct
ccggacatcgagggagtgtatgagacgcaggtgccgctcctcctccgtgccctgatccac
ctgggctgcgtctgcatggtcagcaggcagctcgtcaggcatctggcggggcgagaggcc
gaaacctttgacattgagcacctggagatgcgctcgctggcccagttcacttacctggag
ccaggaagcattcgccacatctacctctaccacagctcccagggcagcaaggcgctcttg
ggcctcttcatcccctcgcagcgcaaagctgccatctttgtgctggacaaggtacgcagc
aaccagatgccgaatctcaccaccctcttctcggcggagcgcagcgcactgctggaaaag
gtgggtgaagagctgctgcccccggacaagcacaccttcgaagtacgcgctgagactgac
cccaaggccgtctacagagccatccagcggctgctgctgggctacaaggacgagcgccgg
ggccccacgctggttgctgtgcaatctaactgggacctgaaacggctggcgagtgggatc
cccatcgtcgaggagttccccttggtccccatccggctggtagatgacatcagctactcg
gtcctggactggcagcgccatgccgcccgccgcatgatccgccactacctcaacctggac
acctgcctctcccaggctttcgagatgagcaggtactaccacatccccattgggaacctc
cccgatgacatctccaccttcggctctgacctgttcttctcgcgccacctccgtcgtcac
aaccacttgctgtggctctcgcccacggcccgcccagacctggggggtaaggaggctgat
gacaaccgcctagtcatggagtttgatgagagagcctccgtggagataaacaaccctggc
tgctactccacagtgtgtctggagctggacatccagagcctggctgtaaatacggtgttg
cagtcccaccacataaacgacatggaaggaggctccagcatgagcatcagcttcgacgtg
attcagcaggcatccctagaagacatggtgacagggaaccaagctgccaacatcccggcc
agctatgacgaaactgccctctgctccaacactttcaggatcctgaagagcatggtggtg
agctgggtgaaggagatcacgcagtatcacaacgtctacgcagacaaccaggtcattcac
ttttaccgctggctccgctctccttcctcccttctctacgacccggcactgcaccgcaca
ctccacaacatgatgaagaagcttttcctgcagctggtggctgagttcaagcgtctgggc
tcctcggtggtttacgccaacttcaaccggatcattctgtgcaccaagaagcggcgcatc
gaggacgccatcagctacatggagtacatcatcaacagcatccactccaaggagatcttc
cactctctgaccatctccttctcccgctgctgggagttcctgctctggatggatccagca
aattatggaggtatcaagggaaaggtggattctcgcatccactacggggagaaggacacc
agcaagaggcaagtgttggaggaggaggaggacagcgaggaagaggaggaggtgggggaa
gaagaggaggaggaaggggacccgaacgtggaggagctgctggagaacagctggaacatc
gcgcagttcctgccccaggccgcctcctgccagagctacttcttgatgatcgtgtcggcc
tacattgtggccgtgtaccacagcatgaaggaggagctgcggcgcaacgcccccgggagc
acccccgtcaagaggaggagcaccagccaggtgtcccaggaggcgctgggggagatgggg
gccatgcccggcatgatcaccttctcgcaggactacgtggccaatgagctcacccagagc
ttcttcaccatcacccagaagatccagaagaagatggctggttctcgtaatgccactgag
ccttcagacatgttcccggtgctgcctggctcctacttgccgctcaacaacccggctctg
gagttcatcaaatacgtttgcaaggtcctctccctggatgccaacataaccaaccaggtg
aacaaactgcgccgggacctgctgcgcctcatcgaggtgggcgagttctctgaagaagcc
cagtttcgggacccttgccgctcctacgtgctccctgaagtcatctgcaggaactgcaac
ttctgcagggacctggacctgtgcaaggaccctgccctctcccaggatgggtcggtgctg
cccagctggatctgctccaactgccaggcgcagtacgactccgatgccatcgaagcagca
ctggtggaagccctgcagaagaaactgatggcctttgtgctgcaggacctggtgtgcaag
aagtgtcatggcgtgaaggagacgcacatgcctgtgtactgcagctgtgctggagacttc
accctcaccatctcctcccagaccttcacggaccacgtcaacgtcttccagaacatcgcc
cagcactatggcatggcccacctgctggaaaccatccagtggctgctgcgcaccaatccc
cagctccggcaatga

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