Gymnogyps californianus (California condor): 127023092
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Entry
127023092 CDS
T08687
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
127023092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127023092
Membrane trafficking [BR:
gcl04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
127023092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
127023092
NCBI-ProteinID:
XP_050762964
LinkDB
All DBs
Position
16:4939660..4988883
Genome browser
AA seq
1592 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPETHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRLGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKPLTEKAKNNRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPSRAQRCTT
FRSVRERESRTRKSSSSYDVSCSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPRPHL
HQCEVSSSLGYTSTRDVLENMLESQQRDSSAPGRFHVGSAESMLHIRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGQQDLTHSSAELLE
LAYHEATGRHISSRHPGDSASFLSFSGTEEYSNGLAGSNSAGMKFKTQNKDSLEDAVSNS
PDPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPEADIDRRDEE
GVQMTAQQVFEEFICQRLMQGYQIIVQSKPQKPATTVPPPLSSSPLYSRGLVSRNRPEEE
DQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDSEFVSCWVEFS
HERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRIMEGEVHCDVY
GDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKGLQIAGPIPTHSLEQS
GPPIGKKGTSALSALLQMEASQKTLGEQQAAMLSGKSSGQPSESGSIAITPTYMDSPRKD
GAFFMDFVRSPRTASTFYSQVSIDQSVPATSDGNILINTGQLPDRGNAQTLGNSQNVADQ
GYTTAGAAEGSSQQCSASTLTSSSTLIEILEAMKHPTTGIQLLSEQKGLSPYCFISAEVV
HWLVNNVEGVQTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIVVDKEPDRVGM
QQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPSRPASYASRHSSFSR
SFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMA
VTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNVSCLLKEG
SEHLFDGFEPETYWDRMHLLQEAIAHRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFLQ
LPYSKRKFSCGQQRRRRNSTSSTNQNMFCEERIGYNWAYNTMLTKTWRSSATGDEKFADR
LLRDFTDFCWNKDSRLVLFWTDCLDKMHASAP
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctcgtcatacataagaagggttttggaggcagtgat
gatgaactggtggtgaatcctaaagtatttcttcaaatcaagctgggagatgttgtggaa
attgcacatcccaatgatgaatacagtcccctgcttctacaagtgaagtcacttaaggaa
gatttgcagaaagaaactataagtgtggatcagacagttgcacaagtgttccgactgcgg
ccataccaggacgtccatgtgaatgttgttgacccaaaggaggtgaccttggacttggtg
gagctgacctttaaagatcaatatattgggcgcggggatatgtggcgactgaagaaaagt
ttggtcagcacatgtgcatatgtcacccaaaaagttgaatttgcgggtatcagggcacag
gcaggtgaactgtgggtaaagagtgagaaagtcacttgtggatacatcagtgaggacacc
cgggtagtcttccgctccacttctgccatggtttatatttttatccagatgagctgtgaa
atgtgggattttgatatttatggggacctatactttgagaaagctgtgaacggtttcctt
gctgacctcttcacaaaatggaaggagaagaactgcagccatgaagtgacagtggttcta
ttttctagaacattttatgaagcaaaatctatagatgagtttcctgaaacgcatcgtgca
tcaattcggcaggatcatgagggaagattttatgaagatttttacaaagttgtagttcag
aatgagagacgagaagagtggacctcattgcttgtgaccattaaaaagcttttcatccag
tatcctgtgttggtacgactagagcaagcagagggctttcctccaggttacaattctacc
tcggcacaagggaactacctggaggccataaatctttcattcaatgtgtttgacaagcat
tacataaaccggaactttgatcggactggccagatgtctgtggttatcacacctggtgtg
ggtgtatttgaagttgatcgactccttatgattctaaccaaacagcggatgatagacaat
gggataggtgtggacttggtgtgcatgggagaacaaccattgcatgctgtaccactcttt
aagctccataatcgctgtggacctggcgactccagattgggtgatgactacaatattcca
cactggataaaccatagtttctacacatccaaaagccagctcctgtgtaacagcttcact
ccacggatcaagctggcaggaaggaaaccactgactgagaaagcaaaaaataaccgagat
gcctcattaggggctccaaaagatgctgagaatgccctgcctatccaggtggattatgac
ggctatgatgcccaggtgttcagactgccaggcccatccagagcccagcgctgtaccact
ttcaggtctgtgagggagagagaaagtcgtaccagaaagagctctagttcctatgacgtc
tcatgcagcccttctctgcagagccgcacgctgcccccagaggaggtgaggagccaggct
tctgacgacagctcactgggcaagatctccaacatcctgatgatcccacggcctcatctg
caccagtgtgaagtcagcagctctttgggctataccagcaccagagatgtccttgagaac
atgctggagtctcagcaacgtgactccagtgcccctgggaggttccatgttggcagtgcg
gaatccatgctgcacattcggcctgggggctatacaccccagcgagcactgataaaccca
tttgccccatcccgcatgcccatgaaacttacatctaacaggaggcgctggatgcacacc
tttcctgtgggtccatcaggagaagctatccagatccatcatcaaacccgtcagaatatg
gcagaaatgcagggcaatgggcaacaggatttgacgcattcctctgctgagctgctggag
ctggcttaccatgaggcaactggcagacatatcagctctcggcatccaggtgacagtgcc
tctttcctgagcttcagcggaacagaagagtactctaacggtctggctggcagcaacagt
gcagggatgaaattcaaaactcagaacaaggattccttggaagatgctgtctctaactct
ccggatccaatgccaggcttctgttgtacagttggagtggactggaaatctctcactact
ccggcatgtctccctcttaccacggactacttccccgaccgtcagagtctgcagaacgat
tacactgagggttgctatgatctcctcccagaagctgacattgacaggagagatgaggaa
ggagtgcagatgacagcccagcaggtgtttgaggagtttatttgtcagcgtctcatgcaa
ggctatcaaattattgtgcaatccaaaccacagaaaccggccacaactgtgccacccccg
ctcagcagcagtcccctttacagtcgaggtcttgtatcaagaaaccgacctgaggaagaa
gatcagtactggctgagtatgggccgtactttccacaaagtaacattaaaagacaaaata
attactgtgactcgatacctgccaaagtatccatacgaatctgctcagataaactacact
tacagcttgtgcccctcacactctgactctgaatttgtctcttgctgggtagaattttcc
catgagagactagaagagtacaagtggaattacttggaccagtatatctgctctgctggc
tctgaggatttcagccttattgagtcactgaaattttggaggactcgcttcctgcttctg
cctgcctgcatcagtgccacaaagcgcattatggaaggagaagtgcactgtgatgtgtat
ggtgacaagccccgttctgatgaggaggagtggcagctcctagacggattcattcgcttt
gtggagggtttgaaccgcattcgtcgacgccatcgatctgatcgaatgattcgaaaaggg
tctgccatgaaaggcttgcagattgctggtccaattcccacccactctctggagcaatct
gggcctcccattgggaagaaaggaacctcagcactctcagctctgctgcagatggaagca
agtcagaagacactgggggaacagcaagcagcaatgctttctgggaagagctctgggcag
ccttcggagagtgggagcattgctatcacacccacctatatggacagccctcgtaaggat
ggggccttctttatggattttgttcgcagcccacgtacagcttcaaccttctactcacag
gtctctatagatcaatcagttcctgcaacctcagatggcaacatactgataaacacgggg
cagttacctgataggggcaatgcgcagaccttgggaaattcccagaatgttgcagaccaa
ggatatactacagctggtgctgcagagggcagctctcagcagtgttcagcaagcactctg
acttcctcctccaccttgatagagattctcgaagccatgaaacaccccaccacagggatc
cagctgctctctgaacagaagggcctctctccgtactgtttcatcagtgcagaagttgta
cactggctggtgaataacgtggaaggtgtgcaaacccaagccatggcgattgacataatg
cagaaaatgctagaagagcagcttattgtccatgcatctggagaagctttacgaaccttt
atttatggcttttatttttacaagattgttgtggacaaagaaccagaccgagtgggcatg
cagcagcctgccatgtggcacacagctgccatggatgacttctccgccttccagaggaaa
tggtttgaggtggcgtttgtggcagaagagctcctgcactcggaaatcccagcgtttttc
ctgccctggctgcccagccgcccagcgtcctatgcaagtaggcacagttcctttagccgc
agtttcggaggacggagccaggcagctgcactattagctgccacagtgcctgagcagcgg
acagtgacgcttgatgtggatgtgaataaccgcactgaccgtttggagtggtgcagttgt
tattaccatggcaatttctccctgaatgctgcctttgaaatcaagttacactggatggca
gtgactgcagctgttctttttgagatggttcagggttggcatcggaaagccacatcctgt
ggtttcttgctagttccagtcttggaaggcccatttgctttgcccagttacttatacgga
gacccacttcgagctcagttgtttatcccactcaatgttagctgcttgttgaaggagggt
agtgagcatttgtttgatggcttcgaaccagaaacatactgggaccgtatgcatctcctc
caggaagcaatagcacacagatttggatttgtgcaagataaatactcagcctctgcgttc
aacttcccagctgagaacaagccccagtatatccatgtcacagggacagtgtttttgcag
ctaccatattccaagcggaaattttcatgtgggcagcagcgacgccggcgcaactccact
agctccaccaaccagaatatgttttgtgaagagcgcattggctacaattgggcctacaac
accatgctgacgaaaacgtggcggtccagtgccactggggatgagaagtttgctgatcgg
ttgctgagagactttacagacttttgctggaacaaagatagtcggcttgttttgttctgg
actgattgtctagataagatgcatgctagtgctccatga
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integrated database retrieval system
